Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 1.9e-136 489.2 248 100.0
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 3.0e-110 402.1 249 84.7
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 1.4e-107 393.3 244 84.4
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 1.8e-107 392.9 244 82.4
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 4.5e-106 388.3 244 81.6
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.0e-105 387.1 244 83.2
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 1.0e-105 387.1 243 81.9
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 6.5e-105 384.4 241 81.3
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 1.1e-104 383.6 239 82.4
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 2.5e-104 382.5 240 80.8
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 5.5e-104 381.3 244 82.0
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 9.4e-104 380.6 239 82.0
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.2e-103 380.2 251 80.9
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 2.1e-103 379.4 227 83.7
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 2.7e-103 379.0 230 83.0
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 3.6e-103 378.6 240 81.2
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 4.7e-103 378.3 232 82.3
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 8.0e-103 377.5 222 86.9
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 2.3e-102 375.9 226 83.2
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 3.0e-102 375.6 227 82.4
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 4.0e-102 375.2 251 80.1
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 6.8e-102 374.4 245 79.6
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 1.5e-101 373.2 239 80.3
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 2.0e-101 372.9 239 79.1
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 2.6e-101 372.5 227 83.7
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 2.6e-101 372.5 241 79.7
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 3.4e-101 372.1 226 82.7
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 4.4e-101 371.7 249 76.3
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 4.4e-101 371.7 239 79.9
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 4.4e-101 371.7 246 77.6
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 7.5e-101 370.9 241 79.3
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 7.5e-101 370.9 238 79.0
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 9.8e-101 370.5 226 82.3
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 9.8e-101 370.5 250 76.8
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 9.8e-101 370.5 238 79.0
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 1.3e-100 370.2 240 78.8
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 1.7e-100 369.8 239 80.8
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 2.2e-100 369.4 246 77.2
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 2.2e-100 369.4 238 78.6
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 6.3e-100 367.9 257 74.7
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 6.3e-100 367.9 257 74.7
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.4e-99 365.9 241 77.6
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 4.1e-99 365.2 240 79.2
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 7.0e-99 364.4 226 81.9
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.6e-98 363.2 228 80.3
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 2.7e-98 362.5 224 82.6
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 1.3e-97 360.1 241 76.8
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 1.3e-97 360.1 245 77.6
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.7e-97 359.8 244 75.8
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.7e-97 359.8 244 75.8
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 2.3e-97 359.4 253 76.3
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 2.9e-97 359.0 243 77.0
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.9e-96 356.3 225 78.7
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.2e-96 355.1 225 78.7
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.2e-95 353.6 244 76.2
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 1.6e-95 353.2 247 73.3
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 6.1e-95 351.3 253 70.8
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 8.0e-95 350.9 249 73.5
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 2.3e-94 349.4 252 74.2
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 5.2e-94 348.2 232 77.2
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 6.8e-94 347.8 236 77.1
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 2.0e-93 346.3 242 72.3
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 9.8e-93 344.0 222 77.9
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.9e-92 341.7 250 73.2
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 4.9e-92 341.7 250 73.2
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.2e-90 337.0 230 73.5
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 5.9e-90 334.7 232 70.3
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 2.3e-89 332.8 210 82.4
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 3.8e-89 332.0 225 74.7
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.5e-88 330.1 233 69.5
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 1.6e-87 326.6 232 69.0
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 2.3e-86 322.8 253 69.2
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 5.2e-86 321.6 242 68.6
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.9e-86 320.9 225 73.3
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 2.0e-85 319.7 232 67.2
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 2.0e-85 319.7 225 71.1
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 2.6e-85 319.3 225 70.2
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 4.9e-84 315.1 248 67.3
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 8.3e-84 314.3 248 67.3
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 2.7e-82 309.3 205 78.0
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 4.3e-80 302.0 207 76.8
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 3.1e-78 295.8 168 85.7
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 8.9e-78 294.3 221 67.9
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 1.1e-75 287.3 207 74.9
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.8e-70 270.0 228 61.0
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 3.1e-70 269.2 257 60.7
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 4.6e-66 255.4 222 65.3
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 3.1e-62 242.7 136 84.6
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 1.3e-57 227.3 219 51.1
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 1.9e-56 223.4 140 83.6
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 1.1e-54 217.6 226 49.6
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.1e-54 216.1 171 70.2
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 3.8e-52 209.1 246 50.4
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 4.9e-52 208.8 159 69.2
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 1.2e-34 151.0 82 87.8
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 4.9e-28 129.0 216 34.3
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 9.7e-16 88.2 128 48.4
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 3.6e-10 69.7 57 59.6


User provided reference genes

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