Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1245300 Malus domestica HOM05D006085 ORTHO05D007559 1.4e-47 192.6 92 100.0
MD17G1236100 Malus domestica HOM05D006085 ORTHO05D007559 3.6e-40 167.9 86 91.9
Prupe.3G189400 Prunus persica HOM05D006085 ORTHO05D007559 1.0e-31 139.8 86 76.7
RcHm_v2.0_Chr2g0127641 Rosa chinensis HOM05D006085 ORTHO05D007559 5.2e-31 137.5 86 73.3
Prupe.3G139700 Prunus persica HOM05D006085 ORTHO05D007559 8.8e-31 136.7 86 74.4
FvH4_6g26520 Fragaria vesca HOM05D006085 ORTHO05D007559 1.7e-29 132.5 86 69.8
CiPaw.03G179300 Carya illinoinensis HOM05D006085 ORTHO05D007559 2.9e-26 121.7 78 69.2
Cpa.g.sc83.67 Carica papaya HOM05D006085 ORTHO05D007559 5.0e-26 120.9 85 64.7
Gohir.A13G055500 Gossypium hirsutum HOM05D006085 ORTHO05D007559 6.5e-26 120.6 83 63.9
Gorai.013G075800 Gossypium raimondii HOM05D006085 ORTHO05D007559 6.5e-26 120.6 83 63.9
Thecc.02G182800 Theobroma cacao HOM05D006085 ORTHO05D007559 8.5e-26 120.2 85 62.4
CANSAT64G0553 Cannabis sativa HOM05D006085 ORTHO05D007559 1.5e-25 119.4 86 62.8
AL3G53720 Arabidopsis lyrata HOM05D006085 ORTHO05D007559 5.5e-25 117.5 82 62.2
Gohir.D13G066600 Gossypium hirsutum HOM05D006085 ORTHO05D007559 5.5e-25 117.5 83 62.7
Thhalv10001957m.g Eutrema salsugineum HOM05D006085 ORTHO05D007559 9.4e-25 116.7 80 65.0
CARHR111290 Cardamine hirsuta HOM05D006085 ORTHO05D007559 3.6e-24 114.8 80 63.8
QL08p039688 Quercus lobata HOM05D006085 ORTHO05D007559 3.6e-24 114.8 75 70.7
Duzib052G1056 Durio zibethinus HOM05D006085 ORTHO05D007559 6.1e-24 114.0 85 60.0
Carub.0003s3516 Capsella rubella HOM05D006085 ORTHO05D007559 4.0e-23 111.3 83 60.2
AT2G20635 Arabidopsis thaliana HOM05D006085 ORTHO05D007559 6.8e-23 110.5 82 59.8
Ciclev10014891m.g Citrus clementina HOM05D006085 ORTHO05D007559 1.2e-22 109.8 86 60.5
C08p42090 Brassica napus HOM05D006085 ORTHO05D007559 1.5e-22 109.4 83 60.2
BolC8t51769H Brassica oleracea HOM05D006085 ORTHO05D007559 1.5e-22 109.4 83 60.2
BcaB08g34934 Brassica carinata HOM05D006085 ORTHO05D007559 2.6e-22 108.6 83 59.0
A09p58770 Brassica napus HOM05D006085 ORTHO05D007559 2.6e-22 108.6 83 59.0
BraA09t41263Z Brassica rapa HOM05D006085 ORTHO05D007559 2.6e-22 108.6 83 59.0
Haze_13204 Corylus avellana HOM05D006085 ORTHO05D007559 2.6e-22 108.6 75 65.3
THA.LOC104804055 Tarenaya hassleriana HOM05D006085 ORTHO05D007559 4.4e-22 107.8 83 56.6
COL.COLO4_05950 Corchorus olitorius HOM05D006085 ORTHO05D007559 1.7e-21 105.9 85 56.5
Atru.chr6.2894 Acer truncatum HOM05D006085 ORTHO05D007559 2.2e-21 105.5 86 58.1
CsaV3_7G005870 Cucumis sativus L. HOM05D006085 ORTHO05D007559 2.2e-21 105.5 86 57.0
GSVIVG01020577001 Vitis vinifera HOM05D006085 ORTHO05D007559 2.8e-21 105.1 86 59.3
Aa31LG8G17530 Aethionema arabicum HOM05D006085 ORTHO05D007559 4.8e-21 104.4 83 55.4
ClCG07G002490 Citrullus lanatus HOM05D006085 ORTHO05D007559 1.1e-20 103.2 86 57.0
Sp3g33890 Schrenkiella parvula HOM05D006085 ORTHO05D007559 1.1e-20 103.2 83 59.0
Sed0017729 Sechium edule HOM05D006085 ORTHO05D007559 1.4e-20 102.8 86 58.1
TWI59G1154 Tripterygium wilfordii HOM05D006085 ORTHO05D007559 3.1e-20 101.7 86 58.1
TAR626G0071 Trochodendron aralioides HOM05D006085 ORTHO05D007559 4.1e-20 101.3 86 58.1
Actinidia30466 Actinidia chinensis HOM05D006085 ORTHO05D007559 5.4e-20 100.9 86 54.7
Hma1.2p1_0002F.1_g002100 Hydrangea macrophylla HOM05D006085 ORTHO05D007559 2.0e-19 99.0 84 52.4
Glyma.06G290500 Glycine max HOM05D006085 ORTHO05D007559 1.0e-18 96.7 76 56.6
Psat7g168600 Pisum sativum HOM05D006085 ORTHO05D007559 1.0e-18 96.7 85 57.6
CSS0044112 Camellia sinensis var. sinensis HOM05D006085 ORTHO05D007559 1.3e-18 96.3 85 52.9
Lalb_Chr19g0135161 Lupinus albus HOM05D006085 ORTHO05D007559 8.5e-18 93.6 76 56.6
TPR.G29620 Trifolium pratense HOM05D006085 ORTHO05D007559 1.9e-17 92.4 77 55.8
TPR.G31028 Trifolium pratense HOM05D006085 ORTHO05D007559 1.9e-17 92.4 77 55.8
CAN.G209.32 Capsicum annuum HOM05D006085 ORTHO05D007559 2.5e-17 92.0 75 56.0
Cc05_g07490 Coffea canephora HOM05D006085 ORTHO05D007559 2.5e-17 92.0 76 55.3
Rhsim06G0139100 Rhododendron simsii HOM05D006085 ORTHO05D007559 2.5e-17 92.0 98 48.0
BcaC07g41200 Brassica carinata HOM05D006085 ORTHO05D007559 3.2e-17 91.7 62 64.5
Solyc07g053820.3 Solanum lycopersicum HOM05D006085 ORTHO05D007559 3.2e-17 91.7 74 56.8
Nitab4.5_0000638g0100 Nicotiana tabacum HOM05D006085 ORTHO05D007559 4.2e-17 91.3 76 56.6
Medtr4g078555 Medicago truncatula HOM05D006085 ORTHO05D007559 5.5e-17 90.9 86 54.7
arahy.Tifrunner.gnm1.ann1.RY71RI Arachis hypogaea HOM05D006085 ORTHO05D007559 7.2e-17 90.5 75 53.3
PGSC0003DMG400032825 Solanum tuberosum HOM05D006085 ORTHO05D007559 9.5e-17 90.1 74 55.4
Cc00_g12340 Coffea canephora HOM05D006085 ORTHO05D007559 1.6e-16 89.4 76 55.3
arahy.Tifrunner.gnm1.ann1.C4PCKW Arachis hypogaea HOM05D006085 ORTHO05D007559 2.1e-16 89.0 75 52.0
arahy.Tifrunner.gnm1.ann1.UWD03M Arachis hypogaea HOM05D006085 ORTHO05D007559 2.1e-16 89.0 75 52.0
MSTRG.15247 Avicennia marina HOM05D006085 ORTHO05D007559 2.1e-16 89.0 76 55.3
Phvul.011G125900 Phaseolus vulgaris HOM05D006085 ORTHO05D007559 2.1e-16 89.0 79 50.6
Potri.007G139000 Populus trichocarpa HOM05D006085 ORTHO05D007559 2.8e-16 88.6 73 57.5
Lj3g0015664 Lotus japonicus HOM05D006085 ORTHO05D007559 3.6e-16 88.2 79 50.6
VMungo1127G1010 Vigna mungo HOM05D006085 ORTHO05D007559 3.6e-16 88.2 75 52.0
Sopen07g027790 Solanum pennellii HOM05D006085 ORTHO05D007559 4.7e-16 87.8 74 54.1
Nitab4.5_0001752g0030 Nicotiana tabacum HOM05D006085 ORTHO05D007559 6.1e-16 87.4 76 55.3
DCAR_021253 Daucus carota HOM05D006085 ORTHO05D007559 8.0e-16 87.0 73 58.9
Hma1.2p1_0256F.1_g103290 Hydrangea macrophylla HOM05D006085 ORTHO05D007559 8.0e-16 87.0 84 47.6
Sabra07G0112000 Salix brachista HOM05D006085 ORTHO05D007559 8.0e-16 87.0 69 59.4
Hund01031 Selenicereus undatus HOM05D006085 ORTHO05D007559 1.0e-15 86.7 88 48.9
Oeu036070.3 Olea europaea HOM05D006085 ORTHO05D007559 1.4e-15 86.3 76 53.9
Manes.13G147400 Manihot esculenta HOM05D006085 ORTHO05D007559 1.8e-15 85.9 75 57.3
PSO541G4164 Papaver somniferum HOM05D006085 ORTHO05D007559 3.0e-15 85.1 76 52.6
PSO675G5281 Papaver somniferum HOM05D006085 ORTHO05D007559 3.0e-15 85.1 76 52.6
Peaxi162Scf00981g00430 Petunia axillaris HOM05D006085 ORTHO05D007559 5.2e-15 84.3 75 54.7
Migut.M00167 Erythranthe guttata HOM05D006085 ORTHO05D007559 8.8e-15 83.6 73 56.2
MELO3C018706.2 Cucumis melo HOM05D006085 ORTHO05D007559 1.2e-14 83.2 86 50.0
Nn1g04152 Nelumbo nucifera HOM05D006085 ORTHO05D007559 1.2e-14 83.2 76 52.6
Lsat_1_v5_gn_4_66841 Lactuca sativa HOM05D006085 ORTHO05D007559 2.6e-14 82.0 82 47.6
Sc12g0003150 Simmondsia chinensis HOM05D006085 ORTHO05D007559 2.6e-14 82.0 72 54.2
ATR0217G009 Amborella trichopoda HOM05D006085 ORTHO05D007559 4.4e-14 81.3 85 52.9
PGR042G2089 Punica granatum HOM05D006085 ORTHO05D007559 9.8e-14 80.1 85 45.9
SGA_v2.0_scaffold70G23511 Striga asiatica HOM05D006085 ORTHO05D007559 9.8e-14 80.1 69 55.1
unitig_21.g20425 Utricularia gibba HOM05D006085 ORTHO05D007559 1.7e-13 79.3 73 54.8
FAN02G2551 Fragaria x ananassa HOM05D006085 ORTHO05D007559 2.2e-13 79.0 47 74.5
FAN14G0301 Fragaria x ananassa HOM05D006085 ORTHO05D007559 2.2e-13 79.0 47 74.5
FAN05G3848 Fragaria x ananassa HOM05D006085 ORTHO05D007559 6.3e-13 77.4 47 74.5
MBI18_g34208_MAGBIO Magnolia biondii HOM05D006085 ORTHO05D007559 1.4e-12 76.3 85 43.5
vmacro12328 Vaccinium macrocarpon HOM05D006085 ORTHO05D007559 1.4e-12 76.3 65 52.3
ECA234G4181 Erigeron canadensis HOM05D006085 ORTHO05D007559 3.1e-12 75.1 82 46.3
HanXRQChr10g0284071 Helianthus annuus HOM05D006085 ORTHO05D007559 7.0e-12 73.9 82 48.8
Aqoxy1G02363 Aquilegia oxysepala HOM05D006085 ORTHO05D007559 1.6e-11 72.8 68 48.5
Ah.01g015320 Amaranthus hybridus HOM05D006085 ORTHO05D007559 2.7e-11 72.0 88 40.9
Manes.13G145916 Manihot esculenta HOM05D006085 ORTHO05D007559 5.9e-11 70.9 64 53.1
AUR62038975 Chenopodium quinoa HOM05D006085 ORTHO05D007559 1.7e-10 69.3 80 47.5
AUR62038885 Chenopodium quinoa HOM05D006085 ORTHO05D007559 2.3e-10 68.9 80 48.8
HPP92_014185 Vanilla planifolia HOM05D006085 ORTHO05D007559 2.9e-10 68.6 87 46.0
FAN09G4168 Fragaria x ananassa HOM05D001433 ORTHO05D005172 1.9e-09 65.9 42 71.4
Duzib132G0978 Durio zibethinus HOM05D006085 ORTHO05D007559 5.6e-09 64.3 46 58.7
SEGI_18400 Sequoiadendron giganteum HOM05D004939 ORTHO05D005843 4.7e-08 61.2 78 44.9
DCAR_023017 Daucus carota HOM05D004939 ORTHO05D005843 6.1e-08 60.8 83 39.8
Zm00001eb236510 Zea mays HOM05D004939 ORTHO05D005843 8.0e-08 60.5 73 38.4
Eucgr.F03614 Eucalyptus grandis HOM05D004939 ORTHO05D005843 1.0e-07 60.1 83 39.8
Aqoxy6G03042 Aquilegia oxysepala HOM05D004939 ORTHO05D005843 1.4e-07 59.7 83 38.6
AagrBONN_evm.TU.Sc2ySwM_228.5262 Anthoceros agrestis HOM05D004939 ORTHO05D005843 2.3e-07 58.9 76 40.8
AagrBONN_evm.TU.Sc2ySwM_228.5265 Anthoceros agrestis HOM05D004939 ORTHO05D005843 2.3e-07 58.9 76 40.8
TPR.G22378 Trifolium pratense HOM05D004939 ORTHO05D005843 2.3e-07 58.9 82 41.5
Glyma.20G006600 Glycine max HOM05D004939 ORTHO05D005843 3.0e-07 58.5 82 39.0
Manes.05G129700 Manihot esculenta HOM05D004939 ORTHO05D005843 3.0e-07 58.5 83 37.3
QL02p016036 Quercus lobata HOM05D004939 ORTHO05D005843 3.0e-07 58.5 85 36.5
VMungo1215G1457 Vigna mungo HOM05D004939 ORTHO05D005843 3.0e-07 58.5 82 40.2
arahy.Tifrunner.gnm1.ann1.6I9FYE Arachis hypogaea HOM05D004939 ORTHO05D005843 4.0e-07 58.2 74 39.2
arahy.Tifrunner.gnm1.ann1.V9NZM2 Arachis hypogaea HOM05D004939 ORTHO05D005843 4.0e-07 58.2 74 39.2
CANSAT11G2529 Cannabis sativa HOM05D004939 ORTHO05D005843 4.0e-07 58.2 85 36.5
Nn5g31070 Nelumbo nucifera HOM05D004939 ORTHO05D005843 5.2e-07 57.8 83 36.1
TAR381G1514 Trochodendron aralioides HOM05D000924 ORTHO05D001209 5.2e-07 57.8 83 38.6
CSS0014437 Camellia sinensis var. sinensis HOM05D004939 ORTHO05D005843 6.8e-07 57.4 83 34.9
Potri.005G258300 Populus trichocarpa HOM05D004939 ORTHO05D005843 6.8e-07 57.4 85 35.3
Phvul.003G009000 Phaseolus vulgaris HOM05D004939 ORTHO05D005843 8.9e-07 57.0 82 39.0
HPP92_020523 Vanilla planifolia HOM05D004939 ORTHO05D005843 8.9e-07 57.0 85 34.1
Lalb_Chr17g0338141 Lupinus albus HOM05D004939 ORTHO05D005843 1.2e-06 56.6 83 38.6
Psat6g131960 Pisum sativum HOM05D004939 ORTHO05D005843 1.2e-06 56.6 82 39.0
Sabra05G0200000 Salix brachista HOM05D004939 ORTHO05D005843 1.2e-06 56.6 85 35.3
CiPaw.07G131300 Carya illinoinensis HOM05D004939 ORTHO05D005843 1.5e-06 56.2 85 36.5
FvH4_5g26460 Fragaria vesca HOM05D004939 ORTHO05D005843 1.5e-06 56.2 83 37.3
Lj2g0017318 Lotus japonicus HOM05D004939 ORTHO05D005843 1.5e-06 56.2 83 38.6
Lalb_Chr10g0095291 Lupinus albus HOM05D004939 ORTHO05D005843 1.5e-06 56.2 83 38.6
MBI04_g18018_MAGBIO Magnolia biondii HOM05D004939 ORTHO05D005843 1.5e-06 56.2 83 36.1
Medtr1g035090 Medicago truncatula HOM05D004939 ORTHO05D005843 1.5e-06 56.2 82 39.0
Potri.002G002900 Populus trichocarpa HOM05D004939 ORTHO05D005843 1.5e-06 56.2 85 35.3
Glyma.07G159700 Glycine max HOM05D004939 ORTHO05D005843 2.0e-06 55.8 82 37.8
RcHm_v2.0_Chr7g0217371 Rosa chinensis HOM05D004939 ORTHO05D005843 2.0e-06 55.8 83 37.3
CAN.G1330.25 Capsicum annuum HOM05D004939 ORTHO05D005843 2.6e-06 55.5 83 34.9
FAN04G1628 Fragaria x ananassa HOM05D004939 ORTHO05D005843 2.6e-06 55.5 83 36.1
Os02g0193600 Oryza sativa ssp. japonica HOM05D004939 ORTHO05D005843 2.6e-06 55.5 83 34.9
PSO017G2996 Papaver somniferum HOM05D004939 ORTHO05D005843 2.6e-06 55.5 83 34.9
PSO170G6093 Papaver somniferum HOM05D004939 ORTHO05D005843 2.6e-06 55.5 83 34.9
Prupe.5G002900 Prunus persica HOM05D004939 ORTHO05D005843 2.6e-06 55.5 83 34.9
Ca_12499_v3 Cicer arietinum L. HOM05D004939 ORTHO05D005843 3.4e-06 55.1 82 39.0
Gohir.D05G283800 Gossypium hirsutum HOM05D004939 ORTHO05D005843 3.4e-06 55.1 83 36.1
Gohir.D05G283802 Gossypium hirsutum HOM05D004939 ORTHO05D005843 3.4e-06 55.1 83 36.1
Gorai.009G298300 Gossypium raimondii HOM05D004939 ORTHO05D005843 3.4e-06 55.1 83 36.1
Sed0003879 Sechium edule HOM05D004939 ORTHO05D005843 3.4e-06 55.1 82 36.6
Sc02g0009340 Simmondsia chinensis HOM05D004939 ORTHO05D005843 3.4e-06 55.1 83 37.3
ATR0605G152 Amborella trichopoda HOM05D004939 ORTHO05D005843 4.4e-06 54.7 83 32.5
HanXRQChr14g0427951 Helianthus annuus HOM05D004939 ORTHO05D005843 4.4e-06 54.7 73 37.0
SEGI_14150 Sequoiadendron giganteum HOM05D004939 ORTHO05D005843 4.4e-06 54.7 83 39.8
PGSC0003DMG400010009 Solanum tuberosum HOM05D004939 ORTHO05D005843 4.4e-06 54.7 83 34.9
Lsat_1_v5_gn_2_3201 Lactuca sativa HOM05D004939 ORTHO05D005843 5.7e-06 54.3 73 35.6
Oeu035772.5 Olea europaea HOM05D004939 ORTHO05D005843 5.7e-06 54.3 83 34.9
Actinidia37902 Actinidia chinensis HOM05D004939 ORTHO05D005843 7.5e-06 53.9 83 33.7
Cfa014153 Carpinus fangiana HOM05D004939 ORTHO05D005843 7.5e-06 53.9 83 34.9
Lj4A813T64 Lonicera japonica HOM05D004939 ORTHO05D005843 7.5e-06 53.9 83 36.1
MD07G1225400 Malus domestica HOM05D006912 ORTHO05D008686 7.5e-06 53.9 72 33.3
Os12g0125300 Oryza sativa ssp. japonica HOM05D006912 ORTHO05D008686 7.5e-06 53.9 72 33.3
Gohir.A05G282600 Gossypium hirsutum HOM05D004939 ORTHO05D005843 9.8e-06 53.5 83 34.9
Thecc.10G149200 Theobroma cacao HOM05D004939 ORTHO05D005843 9.8e-06 53.5 83 34.9


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