Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1237900 Malus domestica HOM05D000071 ORTHO05D000029 2.6e-56 222.2 150 100.0
MD08G1238300 Malus domestica HOM05D000071 ORTHO05D000029 5.5e-30 134.8 151 74.8
MD15G1415000 Malus domestica HOM05D000071 ORTHO05D000029 2.2e-15 86.3 134 64.9
FAN01G0389 Fragaria x ananassa HOM05D000071 ORTHO05D000029 3.8e-15 85.5 132 52.3
MD15G1427000 Malus domestica HOM05D000071 ORTHO05D000029 8.5e-15 84.3 146 61.0
MD15G1426700 Malus domestica HOM05D000071 ORTHO05D000029 1.0e-12 77.4 129 63.6
MD11G1217100 Malus domestica HOM05D000071 ORTHO05D000029 1.8e-12 76.6 129 62.8
MD15G1439600 Malus domestica HOM05D000071 ORTHO05D000029 2.5e-11 72.8 129 63.6
Dinv32122 Davidia involucrata HOM05D000071 ORTHO05D000029 5.7e-11 71.6 133 57.1
Duzib120G0004 Durio zibethinus HOM05D000071 ORTHO05D000029 9.7e-11 70.9 136 57.4
FvH4_7g26565 Fragaria vesca HOM05D000071 ORTHO05D000029 1.7e-10 70.1 128 60.2
FAN06G1668 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.7e-10 70.1 128 60.2
Dinv09261 Davidia involucrata HOM05D003254 ORTHO05D003713 2.2e-10 69.7 145 53.8
Dinv09282 Davidia involucrata HOM05D003254 ORTHO05D003713 2.2e-10 69.7 145 53.8
MD15G1429800 Malus domestica HOM05D000071 ORTHO05D000029 2.2e-10 69.7 69 52.2
Gorai.007G339200 Gossypium raimondii HOM05D000071 ORTHO05D000029 3.7e-10 68.9 125 48.8
MD04G1020400 Malus domestica HOM05D000071 ORTHO05D000029 8.2e-10 67.8 48 68.8
Prupe.2G270200 Prunus persica HOM05D000071 ORTHO05D000029 1.4e-09 67.0 147 53.1
FvH4_7g26566 Fragaria vesca HOM05D000071 ORTHO05D000029 3.1e-09 65.9 132 56.8
FAN03G1688 Fragaria x ananassa HOM05D000071 ORTHO05D000029 3.1e-09 65.9 132 57.6
CAN.G280.13 Capsicum annuum HOM05D000071 ORTHO05D000029 5.3e-09 65.1 130 35.4
Rhsim03G0185600 Rhododendron simsii HOM05D000071 ORTHO05D000029 6.9e-09 64.7 48 62.5
MD08G1238900 Malus domestica HOM05D000071 ORTHO05D000029 9.1e-09 64.3 152 53.9
Prupe.1G055200 Prunus persica HOM05D000071 ORTHO05D000029 9.1e-09 64.3 129 61.2
Rhsim03G0184700 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.2e-08 63.9 51 60.8
Rhsim03G0186100 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.2e-08 63.9 59 57.6
Dinv35215 Davidia involucrata HOM05D000071 ORTHO05D000029 1.5e-08 63.5 138 57.2
Prupe.1G575200 Prunus persica HOM05D000071 ORTHO05D000029 2.0e-08 63.2 128 60.9
FAN01G1144 Fragaria x ananassa HOM05D000071 ORTHO05D000029 4.5e-08 62.0 131 32.1
FAN03G0043 Fragaria x ananassa HOM05D000071 ORTHO05D000029 4.5e-08 62.0 128 58.6
Rhsim03G0185800 Rhododendron simsii HOM05D000071 ORTHO05D000029 4.5e-08 62.0 67 50.7
FvH4_7g26561 Fragaria vesca HOM05D000071 ORTHO05D000029 5.9e-08 61.6 133 42.1
FvH4_7g26564 Fragaria vesca HOM05D000071 ORTHO05D000029 5.9e-08 61.6 151 51.0
FAN06G3346 Fragaria x ananassa HOM05D000071 ORTHO05D000029 5.9e-08 61.6 151 51.0
MD01G1172100 Malus domestica HOM05D000071 ORTHO05D000029 5.9e-08 61.6 134 54.5
Prupe.1G575300 Prunus persica HOM05D000071 ORTHO05D000029 5.9e-08 61.6 129 58.1
ClCG01G010560 Citrullus lanatus HOM05D000071 ORTHO05D000029 7.7e-08 61.2 110 35.5
FvH4_7g26560 Fragaria vesca HOM05D000071 ORTHO05D000029 7.7e-08 61.2 138 54.3
Lsat_1_v5_gn_7_51101 Lactuca sativa HOM05D000071 ORTHO05D000029 7.7e-08 61.2 128 57.0
MD01G1174800 Malus domestica HOM05D000071 ORTHO05D000029 7.7e-08 61.2 129 56.6
Dinv35239 Davidia involucrata HOM05D000071 ORTHO05D000029 1.0e-07 60.8 136 55.9
FAN06G0683 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.3e-07 60.5 130 54.6
RcHm_v2.0_Chr1g0373231 Rosa chinensis HOM05D000071 ORTHO05D000029 1.3e-07 60.5 60 46.7
RcHm_v2.0_Chr1g0373241 Rosa chinensis HOM05D000071 ORTHO05D000029 1.3e-07 60.5 50 58.0
vmacro06851 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 1.3e-07 60.5 54 55.6
Ciclev10027808m.g Citrus clementina HOM05D000071 ORTHO05D000029 1.7e-07 60.1 129 34.1
FAN11G0350 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.7e-07 60.1 132 34.8
Rhsim03G0157000 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.7e-07 60.1 52 53.8
Rhsim03G0158600 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.7e-07 60.1 45 62.2
Dinv07788 Davidia involucrata HOM05D000071 ORTHO05D000029 2.2e-07 59.7 132 53.8
CSS0020490 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 2.9e-07 59.3 128 58.6
Dinv32117 Davidia involucrata HOM05D000071 ORTHO05D000029 2.9e-07 59.3 48 58.3
FAN10G4146 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.9e-07 59.3 132 53.0
Gohir.A11G293400 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.9e-07 59.3 138 46.4
Prupe.1G067000 Prunus persica HOM05D000071 ORTHO05D000029 2.9e-07 59.3 128 33.6
Prupe.1G575100 Prunus persica HOM05D000071 ORTHO05D000029 2.9e-07 59.3 129 58.1
TAR636G2807 Trochodendron aralioides HOM05D000071 ORTHO05D000029 2.9e-07 59.3 141 53.9
FAN01G0842 Fragaria x ananassa HOM05D000071 ORTHO05D000029 5.0e-07 58.5 132 53.0
FvH4_7g26610 Fragaria vesca HOM05D000071 ORTHO05D000029 6.5e-07 58.2 67 46.3
Rhsim03G0157900 Rhododendron simsii HOM05D000071 ORTHO05D000029 6.5e-07 58.2 47 59.6
CSS0041175 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 8.5e-07 57.8 127 57.5
Nitab4.5_0000512g0130 Nicotiana tabacum HOM05D000071 ORTHO05D000029 8.5e-07 57.8 47 57.4
Dinv34533 Davidia involucrata HOM05D000071 ORTHO05D000029 1.1e-06 57.4 132 54.5
MD01G1172800 Malus domestica HOM05D000071 ORTHO05D000029 1.1e-06 57.4 47 55.3
MD01G1180500 Malus domestica HOM05D000071 ORTHO05D000029 1.1e-06 57.4 127 54.3
MD10G1222500 Malus domestica HOM05D000071 ORTHO05D000029 1.4e-06 57.0 50 60.0
Rhsim03G0157300 Rhododendron simsii HOM05D000071 ORTHO05D000029 1.4e-06 57.0 42 61.9
COL.COLO4_15968 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.9e-06 56.6 39 66.7
MBI02_g46469_MAGBIO Magnolia biondii HOM05D000071 ORTHO05D000029 1.9e-06 56.6 131 32.1
vmacro06850 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 1.9e-06 56.6 45 57.8
vmacro06853 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 2.5e-06 56.2 45 57.8
CSS0040382 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 3.2e-06 55.8 132 51.5
Dinv07783 Davidia involucrata HOM05D000071 ORTHO05D000029 3.2e-06 55.8 46 56.5
Hma1.2p1_0088F.1_g045200 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 3.2e-06 55.8 60 48.3
MD01G1178900 Malus domestica HOM05D000071 ORTHO05D000029 3.2e-06 55.8 127 53.5
QL06p046564 Quercus lobata HOM05D000071 ORTHO05D000029 3.2e-06 55.8 52 53.8
Sed0018293 Sechium edule HOM05D000071 ORTHO05D000029 3.2e-06 55.8 44 52.3
Sed0019536 Sechium edule HOM05D000071 ORTHO05D000029 3.2e-06 55.8 63 44.4
Ciclev10007334m.g Citrus clementina HOM05D000071 ORTHO05D000029 4.2e-06 55.5 128 52.3
Hma1.2p1_2569F.1_g324605 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 4.2e-06 55.5 152 51.3
CAN.G248.28 Capsicum annuum HOM05D000071 ORTHO05D000029 5.5e-06 55.1 47 55.3
DCAR_019692 Daucus carota HOM05D000053 ORTHO05D000035 5.5e-06 55.1 140 48.6
FAN28G2276 Fragaria x ananassa HOM05D000071 ORTHO05D000029 5.5e-06 55.1 120 35.0
QL09p052225 Quercus lobata HOM05D000071 ORTHO05D000029 5.5e-06 55.1 134 51.5
MD06G1026600 Malus domestica HOM05D000071 ORTHO05D000029 7.2e-06 54.7 128 52.3
TWI39G1075 Tripterygium wilfordii HOM05D000071 ORTHO05D000029 7.2e-06 54.7 134 53.7
Duzib106G0728 Durio zibethinus HOM05D000071 ORTHO05D000029 9.4e-06 54.3 132 52.3
Duzib106G2003 Durio zibethinus HOM05D000071 ORTHO05D000029 9.4e-06 54.3 132 52.3
SGA_v2.0_scaffold43G16339 Striga asiatica HOM05D000071 ORTHO05D000029 9.4e-06 54.3 46 52.2


User provided reference genes

Program Settings