Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 9.3e-248 859.8 433 100.0
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 4.7e-207 724.5 429 85.5
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 5.0e-193 677.9 424 82.5
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 2.5e-192 675.6 425 83.3
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 2.0e-178 629.4 431 73.8
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.3e-177 626.7 461 74.0
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 4.7e-175 618.2 423 77.8
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 6.1e-175 617.8 420 73.6
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 1.2e-173 613.6 382 79.1
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.3e-172 610.1 418 73.7
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 1.1e-171 607.1 390 76.9
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.8e-171 606.3 388 77.8
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 2.4e-171 605.9 390 76.9
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.9e-169 598.6 423 75.4
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 6.6e-169 597.8 369 80.5
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.2e-167 593.6 431 71.5
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 2.8e-167 592.4 415 71.6
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 5.2e-166 588.2 394 73.4
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 2.0e-165 586.3 411 71.3
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 5.8e-165 584.7 408 73.0
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 7.5e-165 584.3 417 71.5
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 9.8e-165 583.9 411 70.6
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.3e-164 583.6 411 71.0
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.3e-164 583.6 419 71.4
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 2.2e-164 582.8 408 72.3
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 3.7e-164 582.0 387 74.7
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 1.4e-163 580.1 385 75.3
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.9e-163 579.7 370 76.8
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.9e-163 579.7 419 70.2
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 2.4e-163 579.3 404 72.8
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 2.7e-162 575.9 419 70.4
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.7e-162 575.9 389 71.5
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 4.6e-162 575.1 364 75.0
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.3e-161 573.5 418 67.2
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.7e-161 573.2 412 69.4
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 3.0e-161 572.4 368 76.6
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.1e-160 570.5 365 73.7
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.5e-160 570.1 405 69.6
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 1.5e-160 570.1 412 69.2
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.5e-160 570.1 365 73.7
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 2.5e-160 569.3 405 69.9
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 5.6e-160 568.2 371 73.3
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.1e-159 566.2 365 73.2
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 2.8e-159 565.8 371 73.9
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 6.2e-159 564.7 406 69.2
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 2.3e-158 562.8 405 68.4
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 8.9e-158 560.8 377 72.1
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.2e-157 560.5 371 72.8
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 7.5e-157 557.8 399 68.9
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.7e-156 556.6 368 74.2
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 6.4e-156 554.7 374 71.1
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 8.3e-156 554.3 372 71.8
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.4e-155 553.5 365 73.2
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.4e-155 552.7 374 71.4
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 3.2e-155 552.4 374 71.1
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 6.6e-153 544.7 370 71.4
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.1e-152 543.9 391 69.3
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 1.9e-152 543.1 390 68.5
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 3.3e-152 542.3 347 74.4
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 4.3e-152 542.0 378 68.8
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 7.3e-152 541.2 414 65.9
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 1.2e-151 540.4 346 76.9
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 3.6e-151 538.9 413 66.1
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 1.2e-149 533.9 382 68.8
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 2.6e-149 532.7 352 75.3
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 4.4e-149 531.9 414 67.4
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.4e-147 526.9 379 68.3
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 7.1e-147 524.6 365 69.9
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 6.6e-145 518.1 385 65.5
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 1.5e-144 516.9 372 69.1
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 2.5e-144 516.2 399 66.7
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 5.6e-144 515.0 381 66.7
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.8e-142 510.0 374 67.4
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 6.8e-142 508.1 351 71.5
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 3.4e-141 505.8 402 62.4
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 9.2e-139 497.7 375 65.1
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.1e-138 496.5 508 52.6
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 4.6e-138 495.4 376 66.2
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 7.8e-138 494.6 393 65.1
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.6e-133 479.6 355 67.9
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.0e-129 466.1 423 62.9
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 8.7e-129 464.5 367 60.5
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 2.5e-128 463.0 294 76.5
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.6e-117 426.4 374 54.8
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 1.0e-116 424.5 434 55.3
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.1e-115 421.0 361 57.6
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 1.2e-114 417.5 380 58.9
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 4.0e-110 402.5 358 54.5
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 4.5e-109 399.1 343 56.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.3e-103 380.9 244 74.6
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 1.3e-103 380.9 244 74.2
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 5.3e-102 375.6 370 55.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-94 350.1 332 52.4
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 8.5e-92 341.7 286 59.8
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.7e-82 310.1 327 50.2
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 7.5e-64 248.8 371 39.1
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.3e-63 248.1 361 44.3
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 2.0e-48 197.6 128 73.4
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 7.8e-45 185.7 130 68.5
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 4.3e-43 179.9 188 51.6
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 1.9e-38 164.5 130 64.6
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 3.3e-35 153.7 108 67.6
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 5.1e-28 129.8 112 58.0
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.1e-26 124.4 79 70.9
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.4e-25 121.7 125 52.0
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 2.0e-24 117.9 168 40.5
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 4.9e-23 113.2 122 53.3
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.7e-21 107.5 60 78.3
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.0e-20 105.5 72 70.8
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.1e-19 102.1 99 53.5
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.5e-19 101.7 376 27.1
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 2.1e-18 97.8 78 64.1
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 3.4e-16 90.5 179 35.2
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 1.2e-13 82.0 52 75.0
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.2e-13 82.0 350 26.0
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 2.7e-13 80.9 66 60.6
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 6.0e-13 79.7 343 24.8
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 3.3e-11 73.9 334 24.3
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 8.1e-10 69.3 64 51.6


User provided reference genes

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