Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1229300 Malus domestica HOM05D003347 ORTHO05D003821 6.6e-39 164.5 153 100.0
Prupe.1G568600 Prunus persica HOM05D003347 ORTHO05D003821 1.4e-25 120.2 142 85.9
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 1.1e-20 104.0 143 63.6
Duzib248G0125 Durio zibethinus HOM05D003347 ORTHO05D003821 4.0e-20 102.1 143 65.7
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 1.3e-18 97.1 143 63.6
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.3e-18 97.1 143 60.8
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.3e-18 97.1 143 63.6
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 5.4e-17 91.7 157 47.1
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 2.7e-16 89.4 143 60.8
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 4.6e-16 88.6 143 60.8
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 3.9e-15 85.5 143 64.3
FAN25G2408 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.1e-14 84.0 146 77.4
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 5.6e-14 81.6 143 57.3
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 8.1e-13 77.8 143 61.5
Glyma.08G186200 Glycine max HOM05D003347 ORTHO05D003821 1.8e-12 76.6 151 58.3
Glyma.15G046600 Glycine max HOM05D003347 ORTHO05D003821 1.8e-12 76.6 139 64.7
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 8.9e-12 74.3 139 59.7
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 1.5e-11 73.6 137 56.9
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.5e-11 73.6 148 58.1
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 1.5e-11 73.6 140 57.9
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.6e-11 72.8 139 59.7
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.7e-10 70.1 157 66.9
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 1.7e-10 70.1 61 72.1
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 2.2e-10 69.7 144 61.1
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.2e-10 69.7 143 54.5
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 2.2e-10 69.7 143 54.5
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 2.9e-10 69.3 55 74.5
Potri.001G211000 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.1e-09 67.4 143 56.6
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 2.4e-09 66.2 145 52.4
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 3.2e-09 65.9 141 56.0
vmacro12779 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 3.2e-09 65.9 139 56.1
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 7.1e-09 64.7 146 54.8
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 1.6e-08 63.5 55 72.7
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.7e-08 62.8 144 55.6
FAN21G3803 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.5e-08 62.4 38 92.1
FvH4_3g26951 Fragaria vesca HOM05D003347 ORTHO05D003821 4.6e-08 62.0 148 68.2
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 1.0e-07 60.8 44 79.5
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 2.3e-07 59.7 44 79.5
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 3.9e-07 58.9 42 81.0
RcHm_v2.0_Chr5g0049401 Rosa chinensis HOM05D003347 ORTHO05D003821 8.6e-07 57.8 38 81.6
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.1e-06 57.4 145 51.0
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 4.3e-06 55.5 143 50.3
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 5.6e-06 55.1 61 62.3
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 9.6e-06 54.3 142 52.8


User provided reference genes

Program Settings