Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1225400 Malus domestica HOM05D002759 ORTHO05D003290 4.6e-106 387.9 191 100.0
MD00G1111200 Malus domestica HOM05D002759 ORTHO05D003290 4.1e-99 364.8 191 95.3
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 8.4e-60 234.2 165 70.9
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 8.4e-52 207.6 165 64.2
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 7.4e-48 194.5 165 63.0
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 2.7e-42 176.0 160 56.9
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.3e-41 172.9 160 54.4
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 6.7e-41 171.4 160 54.4
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.1e-40 170.6 160 53.8
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 5.7e-40 168.3 160 53.1
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 1.2e-34 150.6 160 46.9
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 6.1e-34 148.3 159 46.5
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 3.9e-33 145.6 160 45.6
MD00G1111100 Malus domestica HOM05D002759 ORTHO05D003290 8.8e-33 144.4 75 93.3
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 2.0e-32 143.3 160 46.2
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 6.3e-31 138.3 160 47.5
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.1e-30 137.5 160 46.2
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 1.4e-30 137.1 159 46.5
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.4e-30 137.1 159 47.8
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 5.3e-30 135.2 162 43.2
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 5.3e-30 135.2 162 45.7
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 6.9e-30 134.8 162 43.2
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.6e-29 132.9 159 41.5
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 2.6e-29 132.9 159 44.7
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 4.5e-29 132.1 159 44.7
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 4.5e-29 132.1 165 42.4
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 2.9e-28 129.4 160 45.0
FAN08G3490 Fragaria x ananassa HOM05D002759 ORTHO05D003290 3.8e-28 129.0 100 58.0
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 5.0e-28 128.6 157 42.0
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 6.5e-28 128.3 157 42.7
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 1.4e-27 127.1 160 45.0
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 1.4e-27 127.1 160 45.0
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 1.4e-27 127.1 164 42.1
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 1.9e-27 126.7 160 43.1
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 2.5e-27 126.3 160 44.4
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 5.5e-27 125.2 160 45.0
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 5.5e-27 125.2 164 42.1
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 9.4e-27 124.4 167 40.7
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 2.7e-26 122.9 166 41.0
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 2.7e-26 122.9 185 38.9
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 6.1e-26 121.7 157 42.7
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 7.9e-26 121.3 160 39.4
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 1.4e-25 120.6 161 41.6
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 2.3e-25 119.8 160 38.8
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 3.0e-25 119.4 160 39.4
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 3.0e-25 119.4 161 38.5
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 3.0e-25 119.4 160 40.6
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 5.2e-25 118.6 159 38.4
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 5.2e-25 118.6 160 38.1
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 6.7e-25 118.2 158 43.7
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 1.1e-24 117.5 157 42.0
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 2.0e-24 116.7 162 38.3
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 3.3e-24 115.9 162 36.4
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 4.4e-24 115.5 157 37.6
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 5.7e-24 115.2 157 38.9
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 7.4e-24 114.8 159 37.7
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 9.7e-24 114.4 160 39.4
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 9.7e-24 114.4 157 42.0
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 9.7e-24 114.4 157 42.0
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 9.7e-24 114.4 157 42.0
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 9.7e-24 114.4 157 42.0
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 9.7e-24 114.4 159 37.7
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 4.8e-23 112.1 159 38.4
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 8.2e-23 111.3 164 36.6
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 4.1e-22 109.0 155 36.8
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 5.3e-22 108.6 159 31.4
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 9.1e-22 107.8 165 35.2
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 1.6e-21 107.1 104 46.2
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 2.6e-21 106.3 157 39.5
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 3.5e-21 105.9 160 35.0
AL7G28920 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.7e-20 103.6 155 34.8
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 1.7e-20 103.6 159 36.5
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 3.8e-20 102.4 159 35.8
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 6.5e-20 101.7 159 35.8
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 8.5e-20 101.3 159 35.8
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 1.1e-19 100.9 159 34.6
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 1.9e-19 100.1 159 35.8
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 3.2e-19 99.4 175 32.6
AT5G28550 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 4.2e-19 99.0 174 33.3
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 7.2e-19 98.2 159 35.2
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 7.2e-19 98.2 159 35.2
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 1.2e-18 97.4 164 34.8
CARHR284400 Cardamine hirsuta HOM05D002759 ORTHO05D003290 3.6e-18 95.9 98 48.0
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 1.0e-17 94.4 163 34.4
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 4.0e-17 92.4 159 34.0
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 4.0e-17 92.4 160 34.4
ATR0661G443 Amborella trichopoda HOM05D002759 ORTHO05D003290 6.7e-17 91.7 173 30.6
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 6.7e-17 91.7 164 32.3
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 3.3e-16 89.4 159 34.0
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 4.4e-16 89.0 160 33.1
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 4.4e-16 89.0 160 33.8
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 5.7e-16 88.6 159 31.4
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 7.5e-16 88.2 78 47.4
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 8.2e-15 84.7 159 32.1
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 1.8e-14 83.6 160 35.0
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 7.0e-14 81.6 104 34.6
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 7.0e-14 81.6 154 31.2
C04p13030 Brassica napus HOM05D002759 ORTHO05D003290 7.0e-14 81.6 154 31.2
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 7.0e-14 81.6 165 30.3
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 1.2e-13 80.9 155 31.6
BolC4t22942H Brassica oleracea HOM05D002759 ORTHO05D003290 3.5e-13 79.3 154 30.5
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 3.5e-13 79.3 164 30.5
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.3e-12 77.4 159 32.1
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 2.2e-12 76.6 99 34.3
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 2.2e-12 76.6 167 27.5
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 8.5e-12 74.7 159 29.6
BcaB02g09105 Brassica carinata HOM05D002759 ORTHO05D003290 1.5e-11 73.9 154 31.2
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 3.2e-11 72.8 163 29.4
MD08G1226100 Malus domestica HOM05D002759 ORTHO05D003290 4.7e-10 68.9 56 62.5
SHI26605 Sapria himalayana HOM05D002759 ORTHO05D003290 8.0e-10 68.2 112 32.1
Atru.chr12.1442 Acer truncatum HOM05D002759 ORTHO05D003290 7.5e-08 61.6 169 27.8
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 1.3e-07 60.8 161 28.0
arahy.Tifrunner.gnm1.ann1.HX0PY9 Arachis hypogaea HOM05D002759 ORTHO05D003290 1.7e-07 60.5 163 25.8
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 2.2e-07 60.1 100 31.0


User provided reference genes

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