Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1213900 Malus domestica HOM05D000972 ORTHO05D007902 2.3e-63 245.4 118 100.0
MD15G1397200 Malus domestica HOM05D000972 ORTHO05D007902 6.6e-39 164.1 121 71.9
RcHm_v2.0_Chr7g0231591 Rosa chinensis HOM05D000972 ORTHO05D007902 2.8e-37 158.7 121 69.4
FvH4_5g33210 Fragaria vesca HOM05D000972 ORTHO05D007902 1.4e-36 156.4 121 68.6
FAN18G3413 Fragaria x ananassa HOM05D000972 ORTHO05D007902 1.4e-36 156.4 121 68.6
CiPaw.03G016500 Carya illinoinensis HOM05D000972 ORTHO05D007902 8.9e-36 153.7 120 67.5
Dinv09399 Davidia involucrata HOM05D000972 ORTHO05D007902 9.9e-35 150.2 110 70.9
TAR381G0923 Trochodendron aralioides HOM05D000972 ORTHO05D007902 1.3e-34 149.8 120 65.8
CANSAT25G3161 Cannabis sativa HOM05D000972 ORTHO05D007902 3.8e-34 148.3 120 65.0
Hma1.2p1_0442F.1_g153990 Hydrangea macrophylla HOM05D000972 ORTHO05D007902 4.9e-34 147.9 120 65.8
Cfa008100 Carpinus fangiana HOM05D000972 ORTHO05D007902 8.4e-34 147.1 110 70.0
HanXRQChr11g0326371 Helianthus annuus HOM05D000972 ORTHO05D007902 1.4e-33 146.4 120 64.2
PGR042G1357 Punica granatum HOM05D000972 ORTHO05D007902 1.9e-33 146.0 120 65.0
Haze_13936 Corylus avellana HOM05D000972 ORTHO05D007902 2.4e-33 145.6 110 69.1
PSO017G6211 Papaver somniferum HOM05D000972 ORTHO05D007902 2.4e-33 145.6 120 63.3
Aqoxy5G00848 Aquilegia oxysepala HOM05D000972 ORTHO05D007902 3.2e-33 145.2 120 63.3
QL09p003678 Quercus lobata HOM05D000972 ORTHO05D007902 4.1e-33 144.8 120 63.3
MELO3C008085.2 Cucumis melo HOM05D000972 ORTHO05D007902 5.4e-33 144.4 120 62.5
CsaV3_2G033140 Cucumis sativus L. HOM05D000972 ORTHO05D007902 5.4e-33 144.4 120 62.5
ClCG11G008910 Citrullus lanatus HOM05D000972 ORTHO05D007902 7.1e-33 144.1 120 62.5
GSVIVG01036396001 Vitis vinifera HOM05D000972 ORTHO05D007902 7.1e-33 144.1 120 63.3
ECA232G4303 Erigeron canadensis HOM05D000972 ORTHO05D007902 9.2e-33 143.7 120 62.5
Lalb_Chr05g0211421 Lupinus albus HOM05D000972 ORTHO05D007902 9.2e-33 143.7 110 68.2
PSO170G0001 Papaver somniferum HOM05D000972 ORTHO05D007902 9.2e-33 143.7 120 63.3
Zm00001eb145490 Zea mays HOM05D000972 ORTHO05D007902 9.2e-33 143.7 119 63.0
Eucgr.F02972 Eucalyptus grandis HOM05D000972 ORTHO05D007902 1.6e-32 142.9 110 68.2
Os01g0885600 Oryza sativa ssp. japonica HOM05D000972 ORTHO05D007902 1.6e-32 142.9 119 63.0
Duzib177G0312 Durio zibethinus HOM05D000972 ORTHO05D007902 2.1e-32 142.5 120 61.7
Glyma.01G231600 Glycine max HOM05D000972 ORTHO05D007902 2.1e-32 142.5 110 66.4
Atru.chr13.2464 Acer truncatum HOM05D000972 ORTHO05D007902 2.7e-32 142.1 120 63.3
arahy.Tifrunner.gnm1.ann1.ARI0Y2 Arachis hypogaea HOM05D000972 ORTHO05D007902 2.7e-32 142.1 111 65.8
arahy.Tifrunner.gnm1.ann1.T9SADQ Arachis hypogaea HOM05D000972 ORTHO05D007902 2.7e-32 142.1 111 65.8
Thecc.08G174600 Theobroma cacao HOM05D000972 ORTHO05D007902 2.7e-32 142.1 120 61.7
Glyma.11G014500 Glycine max HOM05D000972 ORTHO05D007902 3.5e-32 141.7 110 67.3
Gohir.A13G116900 Gossypium hirsutum HOM05D000972 ORTHO05D007902 3.5e-32 141.7 120 60.8
Psat2g186760 Pisum sativum HOM05D000972 ORTHO05D007902 3.5e-32 141.7 111 65.8
A03p28830 Brassica napus HOM05D000972 ORTHO05D007902 4.6e-32 141.4 110 67.3
BcaC01g04694 Brassica carinata HOM05D000972 ORTHO05D007902 6.0e-32 141.0 110 67.3
C03p34850 Brassica napus HOM05D000972 ORTHO05D007902 6.0e-32 141.0 110 67.3
BolC3t15797H Brassica oleracea HOM05D000972 ORTHO05D007902 6.0e-32 141.0 110 67.3
BraA03t12081Z Brassica rapa HOM05D000972 ORTHO05D007902 6.0e-32 141.0 110 67.3
Thhalv10028731m.g Eutrema salsugineum HOM05D000972 ORTHO05D007902 6.0e-32 141.0 110 67.3
Sp6g07390 Schrenkiella parvula HOM05D000972 ORTHO05D007902 6.0e-32 141.0 110 67.3
Actinidia03520 Actinidia chinensis HOM05D000972 ORTHO05D007902 7.8e-32 140.6 120 60.8
ATR1089G075 Amborella trichopoda HOM05D000972 ORTHO05D007902 7.8e-32 140.6 120 62.5
Migut.C01362 Erythranthe guttata HOM05D000972 ORTHO05D007902 7.8e-32 140.6 120 61.7
MBI06_g15296_MAGBIO Magnolia biondii HOM05D000972 ORTHO05D007902 7.8e-32 140.6 120 61.7
Nitab4.5_0002654g0090 Nicotiana tabacum HOM05D000972 ORTHO05D007902 7.8e-32 140.6 120 61.7
Nitab4.5_0003510g0110 Nicotiana tabacum HOM05D000972 ORTHO05D007902 7.8e-32 140.6 120 61.7
Gorai.013G134500 Gossypium raimondii HOM05D000972 ORTHO05D007902 1.0e-31 140.2 120 60.8
Manes.02G207800 Manihot esculenta HOM05D000972 ORTHO05D007902 1.0e-31 140.2 120 61.7
Potri.019G074600 Populus trichocarpa HOM05D000972 ORTHO05D007902 1.0e-31 140.2 120 62.5
SalBow7G1915 Salvia bowleyana HOM05D000972 ORTHO05D007902 1.0e-31 140.2 120 61.7
BcaB01g02768 Brassica carinata HOM05D000972 ORTHO05D007902 1.3e-31 139.8 110 66.4
Carub.0006s2858 Capsella rubella HOM05D000972 ORTHO05D007902 1.3e-31 139.8 110 66.4
CDE07G1949 Ceratophyllum demersum HOM05D000972 ORTHO05D007902 1.3e-31 139.8 120 61.7
Cc10_g09070 Coffea canephora HOM05D000972 ORTHO05D007902 1.3e-31 139.8 120 60.8
Gohir.D13G120200 Gossypium hirsutum HOM05D000972 ORTHO05D007902 1.7e-31 139.4 120 60.8
Phvul.002G035500 Phaseolus vulgaris HOM05D000972 ORTHO05D007902 1.7e-31 139.4 110 66.4
DCAR_014005 Daucus carota HOM05D000972 ORTHO05D007902 2.3e-31 139.0 120 62.5
VMungo1309G3099 Vigna mungo HOM05D000972 ORTHO05D007902 2.3e-31 139.0 110 66.4
BcaC03g16432 Brassica carinata HOM05D000972 ORTHO05D007902 3.0e-31 138.7 117 62.4
C02p42570 Brassica napus HOM05D000972 ORTHO05D007902 3.0e-31 138.7 117 62.4
LjContig00222g0015412 Lotus japonicus HOM05D000972 ORTHO05D007902 3.0e-31 138.7 110 64.5
Pp3c9_110 Physcomitrium patens HOM05D000972 ORTHO05D007902 3.0e-31 138.7 120 60.0
unitig_37.g13083 Utricularia gibba HOM05D000972 ORTHO05D007902 3.0e-31 138.7 105 67.6
AT4G10030 Arabidopsis thaliana HOM05D000972 ORTHO05D007902 3.9e-31 138.3 110 65.5
Ca_24478_v3 Cicer arietinum L. HOM05D000972 ORTHO05D007902 3.9e-31 138.3 121 60.3
Ciclev10020574m.g Citrus clementina HOM05D000972 ORTHO05D007902 5.1e-31 137.9 119 61.3
CAN.G1199.5 Capsicum annuum HOM05D000972 ORTHO05D007902 6.6e-31 137.5 120 60.8
THA.LOC104815868 Tarenaya hassleriana HOM05D000972 ORTHO05D007902 6.6e-31 137.5 120 60.8
A02p26770 Brassica napus HOM05D000972 ORTHO05D007902 8.6e-31 137.1 110 65.5
BraA02t07681Z Brassica rapa HOM05D000972 ORTHO05D007902 8.6e-31 137.1 110 65.5
MSTRG.25494 Avicennia marina HOM05D000972 ORTHO05D007902 1.1e-30 136.7 120 60.8
Oeu013903.1 Olea europaea HOM05D000972 ORTHO05D007902 1.1e-30 136.7 120 60.0
CSS0002465 Camellia sinensis var. sinensis HOM05D000972 ORTHO05D007902 2.5e-30 135.6 120 59.2
Solyc06g064640.3 Solanum lycopersicum HOM05D000972 ORTHO05D007902 2.5e-30 135.6 120 60.0
Sopen06g023120 Solanum pennellii HOM05D000972 ORTHO05D007902 2.5e-30 135.6 120 60.0
TWI18G0505 Tripterygium wilfordii HOM05D000972 ORTHO05D007902 2.5e-30 135.6 120 60.0
AL6G43750 Arabidopsis lyrata HOM05D000972 ORTHO05D007902 3.3e-30 135.2 110 64.5
Actinidia29393 Actinidia chinensis HOM05D000972 ORTHO05D007902 7.3e-30 134.0 106 64.2
Rhsim02G0173700 Rhododendron simsii HOM05D000972 ORTHO05D007902 7.3e-30 134.0 115 63.5
HPP92_012703 Vanilla planifolia HOM05D000972 ORTHO05D007902 7.3e-30 134.0 120 60.0
Aa31LG9G11960 Aethionema arabicum HOM05D000972 ORTHO05D007902 9.6e-30 133.7 110 64.5
AagrBONN_evm.TU.Sc2ySwM_228.2032 Anthoceros agrestis HOM05D000972 ORTHO05D007902 9.6e-30 133.7 120 58.3
CARHR261030 Cardamine hirsuta HOM05D000972 ORTHO05D007902 9.6e-30 133.7 110 63.6
HPP92_012684 Vanilla planifolia HOM05D000972 ORTHO05D007902 9.6e-30 133.7 120 59.2
Hund02269 Selenicereus undatus HOM05D000972 ORTHO05D007902 4.7e-29 131.3 110 62.7
Mapoly0057s0050 Marchantia polymorpha HOM05D000972 ORTHO05D007902 5.2e-28 127.9 121 55.4
Sc10g0009040 Simmondsia chinensis HOM05D000972 ORTHO05D007902 1.5e-27 126.3 110 60.9
FvH4_5g32660 Fragaria vesca HOM05D000972 ORTHO05D007902 5.8e-27 124.4 99 66.7
CBR_g4880 Chara braunii HOM05D000972 ORTHO05D007902 7.6e-27 124.0 120 55.0
Prupe.1G546000 Prunus persica HOM05D000972 ORTHO05D007902 2.2e-26 122.5 95 69.5
AUR62022408 Chenopodium quinoa HOM05D000972 ORTHO05D007902 1.9e-25 119.4 110 58.2
SMO351G0469 Selaginella moellendorffii HOM05D000972 ORTHO05D007902 7.1e-25 117.5 119 54.6
Sed0026479 Sechium edule HOM05D000972 ORTHO05D007902 2.7e-24 115.5 102 57.8
MD08G1214300 Malus domestica HOM05D000972 ORTHO05D007902 6.0e-24 114.4 85 72.9
Sabra19G0085300 Salix brachista HOM05D000972 ORTHO05D007902 1.0e-23 113.6 88 67.0
EL10Ac1g01707 Beta vulgaris HOM05D000972 ORTHO05D007902 8.7e-23 110.5 159 42.1
vmacro11036 Vaccinium macrocarpon HOM05D000972 ORTHO05D007902 1.5e-22 109.8 96 61.5
Lsat_1_v5_gn_4_133140 Lactuca sativa HOM05D000972 ORTHO05D007902 6.2e-21 104.4 96 60.4
TPR.G37881 Trifolium pratense HOM05D000972 ORTHO05D007902 2.0e-19 99.4 84 63.1
Peaxi162Scf00961g00038 Petunia axillaris HOM05D000972 ORTHO05D007902 2.6e-19 99.0 135 45.2
Dinv01246 Davidia involucrata HOM05D000972 ORTHO05D007902 7.6e-19 97.4 92 58.7
AUR62042166 Chenopodium quinoa HOM05D000972 ORTHO05D007902 1.1e-17 93.6 92 56.5
Lj9A699G51 Lonicera japonica HOM05D000972 ORTHO05D007902 1.9e-17 92.8 102 52.9
Cre08.g384600 Chlamydomonas reinhardtii HOM05D000972 ORTHO05D007902 7.1e-17 90.9 125 41.6
Sabra15G0089900 Salix brachista HOM05D000972 ORTHO05D007902 2.3e-15 85.9 48 83.3
FAN18G0128 Fragaria x ananassa HOM05D000972 ORTHO05D007902 5.1e-15 84.7 48 81.2
MCO10G240 Micromonas commoda HOM05D000972 ORTHO05D007902 2.5e-14 82.4 122 39.3
Cre08.g384800 Chlamydomonas reinhardtii HOM05D000972 ORTHO05D007902 5.6e-14 81.3 129 39.5
SEGI_17242 Sequoiadendron giganteum HOM05D000972 ORTHO05D007902 2.8e-13 79.0 45 82.2
Cpa.g.sc21.65 Carica papaya HOM05D000972 ORTHO05D007902 2.6e-11 72.4 44 77.3
PRCOL_00003039 Prasinoderma coloniale HOM05D000972 ORTHO05D007902 2.2e-10 69.3 124 38.7
COL.COLO4_24587 Corchorus olitorius HOM05D000972 ORTHO05D007902 4.9e-10 68.2 44 72.7
FAN13G0779 Fragaria x ananassa HOM05D000972 ORTHO05D007902 7.9e-08 60.8 71 57.7
CSS0032096 Camellia sinensis var. sinensis HOM05D000972 ORTHO05D007902 3.9e-07 58.5 55 58.2
Mapoly0062s0062 Marchantia polymorpha HOM05D000972 ORTHO05D007713 8.7e-07 57.4 124 33.9
FAN04G1938 Fragaria x ananassa HOM05D000604 ORTHO05D000990 7.4e-06 54.3 45 66.7
Sabra15G0089800 Salix brachista HOM05D000972 ORTHO05D007902 7.4e-06 54.3 49 57.1


User provided reference genes

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