Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1197000 Malus domestica HOM05D000042 ORTHO05D001427 9.0e-38 159.8 85 100.0
MD08G1197300 Malus domestica HOM05D000042 ORTHO05D001427 5.1e-33 144.1 84 90.5
MD08G1196900 Malus domestica HOM05D000042 ORTHO05D001427 1.1e-30 136.3 84 88.1
MD15G1384600 Malus domestica HOM05D000042 ORTHO05D001427 3.1e-30 134.8 84 85.7
MD15G1384500 Malus domestica HOM05D000042 ORTHO05D001427 4.6e-26 120.9 84 76.2
Prupe.1G531100 Prunus persica HOM05D000042 ORTHO05D001427 3.3e-16 88.2 91 62.6
Prupe.1G531700 Prunus persica HOM05D000042 ORTHO05D001427 1.5e-13 79.3 92 56.5
Prupe.1G531600 Prunus persica HOM05D000042 ORTHO05D001427 1.3e-12 76.3 91 58.2
Prupe.1G531400 Prunus persica HOM05D000042 ORTHO05D001427 2.1e-10 68.9 94 55.3
FvH4_5g35400 Fragaria vesca HOM05D000042 ORTHO05D001427 1.0e-09 66.6 85 47.1
FAN04G2310 Fragaria x ananassa HOM05D000042 ORTHO05D001427 1.8e-09 65.9 85 47.1
FAN13G1912 Fragaria x ananassa HOM05D000042 ORTHO05D029509 2.3e-09 65.5 85 47.1
Rhsim07G0211700 Rhododendron simsii HOM05D000042 ORTHO05D001427 6.7e-09 63.9 91 54.9
RcHm_v2.0_Chr7g0236801 Rosa chinensis HOM05D000042 ORTHO05D001427 3.3e-08 61.6 85 47.1
RcHm_v2.0_Chr7g0236811 Rosa chinensis HOM05D000042 ORTHO05D001427 2.2e-07 58.9 89 52.8
CSS0008173 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D001427 2.8e-07 58.5 84 50.0
FAN22G0131 Fragaria x ananassa HOM05D000042 ORTHO05D001427 3.7e-07 58.2 86 44.2
FAN17G1230 Fragaria x ananassa HOM05D000042 ORTHO05D001427 4.8e-07 57.8 86 44.2
Thecc.08G070300 Theobroma cacao HOM05D000042 ORTHO05D001427 6.3e-07 57.4 83 51.8
CiPaw.07G166000 Carya illinoinensis HOM05D000042 ORTHO05D001427 1.1e-06 56.6 84 48.8
Potri.002G105600 Populus trichocarpa HOM05D000042 ORTHO05D001427 1.1e-06 56.6 84 48.8
Gorai.010G035000 Gossypium raimondii HOM05D000042 ORTHO05D001427 1.8e-06 55.8 83 45.8
GSVIVG01009171001 Vitis vinifera HOM05D000042 ORTHO05D001427 2.4e-06 55.5 84 45.2
Dinv42618 Davidia involucrata HOM05D000042 ORTHO05D001427 3.1e-06 55.1 86 46.5
COL.COLO4_35239 Corchorus olitorius HOM05D000042 ORTHO05D001427 5.3e-06 54.3 84 46.4
Manes.18G059200 Manihot esculenta HOM05D000042 ORTHO05D001427 5.3e-06 54.3 84 47.6
vmacro04655 Vaccinium macrocarpon HOM05D000042 ORTHO05D001427 5.3e-06 54.3 99 44.4
Atru.chr13.1018 Acer truncatum HOM05D000042 ORTHO05D001427 6.9e-06 53.9 89 46.1
Actinidia10277 Actinidia chinensis HOM05D000042 ORTHO05D001427 6.9e-06 53.9 89 47.2
CiPaw.08G055400 Carya illinoinensis HOM05D000042 ORTHO05D001427 6.9e-06 53.9 85 45.9
Duzib093G0029 Durio zibethinus HOM05D000042 ORTHO05D001427 6.9e-06 53.9 84 47.6
RcHm_v2.0_Chr7g0205061 Rosa chinensis HOM05D000042 ORTHO05D029509 6.9e-06 53.9 77 42.9
Gohir.A06G032600 Gossypium hirsutum HOM05D000042 ORTHO05D001427 9.1e-06 53.5 84 44.0


User provided reference genes

Program Settings