Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.2e-68 263.1 133 100.0
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 1.3e-38 163.3 102 77.5
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 3.1e-37 158.7 100 78.0
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 4.1e-37 158.3 100 78.0
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.6e-36 156.4 99 77.8
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 1.6e-36 156.4 99 77.8
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.0e-35 151.4 101 82.2
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 8.5e-35 150.6 85 90.6
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.1e-34 150.2 99 74.7
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.5e-34 149.8 117 65.8
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 2.5e-34 149.1 99 74.7
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.5e-34 149.1 100 74.0
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 4.2e-34 148.3 99 73.7
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 7.2e-34 147.5 100 74.0
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 9.4e-34 147.1 100 72.0
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 9.4e-34 147.1 100 72.0
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.2e-33 146.7 94 77.7
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.2e-33 146.7 91 80.2
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.6e-33 146.4 83 86.7
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 2.1e-33 146.0 103 74.8
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 3.6e-33 145.2 99 77.8
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 3.6e-33 145.2 99 71.7
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 4.7e-33 144.8 99 72.7
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.4e-32 143.3 101 72.3
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 1.8e-32 142.9 101 71.3
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 1.8e-32 142.9 100 73.0
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.8e-32 142.9 107 74.8
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.8e-32 142.9 101 71.3
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 4.0e-32 141.7 102 71.6
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 5.2e-32 141.4 85 84.7
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 6.8e-32 141.0 101 70.3
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 8.8e-32 140.6 101 70.3
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 8.8e-32 140.6 98 81.6
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.2e-31 140.2 93 81.7
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.2e-31 140.2 93 81.7
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.2e-31 140.2 99 71.7
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.5e-31 139.8 101 71.3
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 2.6e-31 139.0 100 80.0
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 3.4e-31 138.7 100 79.0
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 3.4e-31 138.7 100 79.0
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 4.4e-31 138.3 108 68.5
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 7.5e-31 137.5 101 74.3
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 9.7e-31 137.1 100 71.0
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.3e-30 136.7 105 66.7
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 1.3e-30 136.7 94 78.7
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 1.3e-30 136.7 107 69.2
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.3e-30 136.7 84 76.2
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.7e-30 136.3 100 78.0
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.2e-30 136.0 104 68.3
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.8e-30 135.6 94 71.3
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 2.8e-30 135.6 94 71.3
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.7e-30 135.2 101 71.3
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 8.3e-30 134.0 94 71.3
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 1.8e-29 132.9 86 77.9
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.8e-29 132.9 100 74.0
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 3.1e-29 132.1 100 71.0
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 5.3e-29 131.3 93 79.6
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 5.3e-29 131.3 93 77.4
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 9.1e-29 130.6 100 71.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 9.1e-29 130.6 89 85.4
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.2e-28 130.2 100 69.0
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 1.6e-28 129.8 100 70.0
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 3.5e-28 128.6 95 77.9
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 4.5e-28 128.3 105 67.6
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 7.7e-28 127.5 102 70.6
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.0e-27 127.1 89 79.8
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.3e-27 126.7 99 69.7
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 1.7e-27 126.3 94 77.7
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 2.2e-27 125.9 110 63.6
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 2.9e-27 125.6 116 62.9
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.9e-26 122.9 106 63.2
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 2.5e-26 122.5 87 81.6
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 3.2e-26 122.1 109 67.9
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 4.2e-26 121.7 99 67.7
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 4.2e-26 121.7 103 68.9
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 7.2e-26 120.9 111 68.5
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 1.6e-25 119.8 90 76.7
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.1e-25 119.4 105 67.6
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 8.0e-25 117.5 97 72.2
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.0e-24 117.1 86 74.4
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 1.8e-24 116.3 89 74.2
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 3.0e-24 115.5 95 70.5
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 4.0e-24 115.2 90 70.0
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 6.8e-24 114.4 93 68.8
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 6.8e-24 114.4 101 67.3
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 6.8e-24 114.4 101 67.3
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 2.0e-23 112.8 89 70.8
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 2.6e-23 112.5 107 65.4
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 5.7e-23 111.3 97 70.1
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 7.5e-23 110.9 95 70.5
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 7.5e-23 110.9 95 70.5
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 9.8e-23 110.5 96 69.8
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 9.8e-23 110.5 100 62.0
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.3e-22 110.2 78 82.1
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 2.8e-22 109.0 109 60.6
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.8e-21 106.3 99 54.5
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 1.2e-20 103.6 101 64.4
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 2.0e-20 102.8 88 69.3
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 4.5e-20 101.7 89 69.7
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 4.5e-20 101.7 89 69.7
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 4.5e-20 101.7 104 59.6
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 7.7e-20 100.9 93 66.7
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.7e-19 99.8 57 80.7
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.1e-18 97.1 95 63.2
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 1.5e-18 96.7 112 56.2
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 3.3e-18 95.5 61 73.8
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 5.5e-18 94.7 61 68.9
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 1.2e-17 93.6 61 70.5
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.4e-16 90.1 102 54.9
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 5.2e-16 88.2 89 56.2
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 6.8e-16 87.8 86 62.8
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 8.3e-14 80.9 75 57.3
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 7.0e-13 77.8 62 64.5
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 1.7e-11 73.2 104 45.2
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 1.5e-10 70.1 102 49.0
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 3.3e-10 68.9 63 71.4
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 4.3e-10 68.6 67 61.2
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 3.6e-09 65.5 54 72.2
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 4.7e-09 65.1 58 62.1
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 8.0e-09 64.3 113 36.3


User provided reference genes

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