Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1163400 Malus domestica HOM05D000555 ORTHO05D001906 1.8e-196 689.1 352 100.0
MD08G1163700 Malus domestica HOM05D000555 ORTHO05D001906 1.2e-144 516.9 286 93.7
MD15G1350300 Malus domestica HOM05D000555 ORTHO05D001906 2.8e-125 452.6 369 68.8
Prupe.1G499400 Prunus persica HOM05D000555 ORTHO05D001906 5.6e-110 401.7 381 61.4
QL09p034959 Quercus lobata HOM05D000555 ORTHO05D001906 4.8e-53 212.6 428 35.0
RcHm_v2.0_Chr6g0295681 Rosa chinensis HOM05D000555 ORTHO05D001906 4.5e-51 206.1 340 45.3
FAN20G1220 Fragaria x ananassa HOM05D000555 ORTHO05D001906 9.4e-49 198.4 342 44.4
FvH4_2g26820 Fragaria vesca HOM05D000555 ORTHO05D001906 3.6e-48 196.4 342 43.9
FAN24G2587 Fragaria x ananassa HOM05D000555 ORTHO05D001906 1.8e-47 194.1 342 43.3
FAN15G2287 Fragaria x ananassa HOM05D000555 ORTHO05D001906 2.0e-46 190.7 339 43.4
FAN27G2775 Fragaria x ananassa HOM05D000555 ORTHO05D001906 2.6e-46 190.3 339 43.4
Cfa016012 Carpinus fangiana HOM05D000555 ORTHO05D001906 3.1e-44 183.3 401 37.4
CANSAT11G2461 Cannabis sativa HOM05D000555 ORTHO05D001906 1.0e-42 178.3 324 38.3
CiPaw.05G222400 Carya illinoinensis HOM05D000555 ORTHO05D001906 2.2e-42 177.2 280 41.8
Haze_00450 Corylus avellana HOM05D000555 ORTHO05D001906 8.0e-40 168.7 281 42.0
Dinv07225 Davidia involucrata HOM05D000555 ORTHO05D001906 1.4e-36 157.9 344 36.6
TAR381G0759 Trochodendron aralioides HOM05D000555 ORTHO05D001906 1.2e-35 154.8 347 35.2
GSVIVG01008876001 Vitis vinifera HOM05D000555 ORTHO05D001906 1.2e-35 154.8 345 37.7
Atru.chr13.1457 Acer truncatum HOM05D000555 ORTHO05D001906 4.5e-35 152.9 357 34.7
Atru.chr13.1479 Acer truncatum HOM05D000555 ORTHO05D001906 4.5e-35 152.9 357 34.7
Dinv27321 Davidia involucrata HOM05D000555 ORTHO05D001906 1.3e-34 151.4 345 35.7
Thecc.08G124600 Theobroma cacao HOM05D000555 ORTHO05D001906 1.0e-31 141.7 327 35.5
Duzib093G1130 Durio zibethinus HOM05D000555 ORTHO05D001906 2.0e-30 137.5 327 33.6
Nn5g28268 Nelumbo nucifera HOM05D000555 ORTHO05D001906 2.0e-30 137.5 341 32.0
Manes.18G076700 Manihot esculenta HOM05D000555 ORTHO05D001906 1.3e-29 134.8 318 34.9
TWI56G0829 Tripterygium wilfordii HOM05D000555 ORTHO05D001906 3.2e-28 130.2 354 33.3
Actinidia21320 Actinidia chinensis HOM05D000555 ORTHO05D001906 1.7e-26 124.4 341 32.0
MBI09_g12164_MAGBIO Magnolia biondii HOM05D000555 ORTHO05D001906 2.5e-25 120.6 329 33.7
Aqoxy6G00208 Aquilegia oxysepala HOM05D000555 ORTHO05D001906 3.1e-23 113.6 341 29.0
VMungo0647G1307 Vigna mungo HOM05D000555 ORTHO05D001906 1.5e-22 111.3 360 29.2
Lj1g0015636 Lotus japonicus HOM05D000555 ORTHO05D001906 2.0e-22 110.9 391 30.4
Duzib116G0370 Durio zibethinus HOM05D000555 ORTHO05D001906 5.8e-22 109.4 300 32.0
Potri.002G084300 Populus trichocarpa HOM05D000555 ORTHO05D001906 1.7e-21 107.8 406 30.8
Peaxi162Scf00051g00732 Petunia axillaris HOM05D000555 ORTHO05D001906 1.1e-20 105.1 330 27.9
Gohir.D01G180700 Gossypium hirsutum HOM05D000555 ORTHO05D001906 2.4e-20 104.0 326 30.4
Gohir.A01G188800 Gossypium hirsutum HOM05D000555 ORTHO05D001906 3.2e-20 103.6 397 28.0
Gorai.002G221900 Gossypium raimondii HOM05D000555 ORTHO05D001906 7.0e-20 102.4 326 30.1
Sp5g32750 Schrenkiella parvula HOM05D000555 ORTHO05D001906 1.6e-19 101.3 326 29.1
CSS0047814 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 7.8e-19 99.0 326 29.8
Thhalv10018009m.g Eutrema salsugineum HOM05D000555 ORTHO05D001906 7.8e-19 99.0 314 29.0
Carub.0002s2449 Capsella rubella HOM05D000555 ORTHO05D001906 5.0e-18 96.3 316 29.1
Lalb_Chr10g0101751 Lupinus albus HOM05D000555 ORTHO05D001906 8.6e-18 95.5 373 30.0
CARHR071110 Cardamine hirsuta HOM05D000555 ORTHO05D001906 1.1e-17 95.1 314 30.6
AL2G37810 Arabidopsis lyrata HOM05D000555 ORTHO05D001906 1.5e-17 94.7 312 30.4
arahy.Tifrunner.gnm1.ann1.HRB127 Arachis hypogaea HOM05D000555 ORTHO05D001906 2.5e-17 94.0 284 31.3
Aa31LG4G7710 Aethionema arabicum HOM05D000555 ORTHO05D001906 4.3e-17 93.2 304 28.9
Psat6g099000 Pisum sativum HOM05D000555 ORTHO05D001906 1.2e-16 91.7 297 31.6
Rhsim06G0104100 Rhododendron simsii HOM05D000555 ORTHO05D001906 1.2e-16 91.7 329 29.5
Phvul.008G163350 Phaseolus vulgaris HOM05D000555 ORTHO05D001906 1.6e-16 91.3 369 28.5
AT1G77600 Arabidopsis thaliana HOM05D000555 ORTHO05D001906 2.1e-16 90.9 313 28.8
Glyma.13G080300 Glycine max HOM05D000555 ORTHO05D001906 2.1e-16 90.9 295 32.9
arahy.Tifrunner.gnm1.ann1.028SBR Arachis hypogaea HOM05D000555 ORTHO05D001906 2.8e-16 90.5 282 30.5
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 6.2e-16 89.4 276 29.3
Eucgr.F03787 Eucalyptus grandis HOM05D000555 ORTHO05D001906 1.1e-15 88.6 305 28.2
A02p21430 Brassica napus HOM05D000555 ORTHO05D001906 5.2e-15 86.3 317 29.3
BcaC03g15748 Brassica carinata HOM05D000555 ORTHO05D001906 8.9e-15 85.5 317 29.3
Ca_14563_v3 Cicer arietinum L. HOM05D000555 ORTHO05D001906 8.9e-15 85.5 376 26.3
COL.COLO4_35931 Corchorus olitorius HOM05D000555 ORTHO05D001906 8.9e-15 85.5 316 28.5
BcaB05g25062 Brassica carinata HOM05D000555 ORTHO05D001906 2.0e-14 84.3 315 28.6
Sed0006597 Sechium edule HOM05D000555 ORTHO05D001906 5.8e-14 82.8 115 41.7
Cpa.g.sc36.62 Carica papaya HOM05D000555 ORTHO05D001906 2.2e-13 80.9 344 27.0
Nitab4.5_0004882g0040 Nicotiana tabacum HOM05D000555 ORTHO05D001906 2.9e-13 80.5 325 26.5
BraA02t07153Z Brassica rapa HOM05D000555 ORTHO05D001906 6.4e-13 79.3 304 29.6
C02p34810 Brassica napus HOM05D000555 ORTHO05D001906 1.1e-12 78.6 303 28.7
EL10Ac1g01004 Beta vulgaris HOM05D000555 ORTHO05D001906 2.4e-12 77.4 378 29.4
BolC2t09500H Brassica oleracea HOM05D000555 ORTHO05D001906 2.4e-12 77.4 304 29.3
Medtr1g037280 Medicago truncatula HOM05D000555 ORTHO05D001906 5.4e-12 76.3 296 28.4
MELO3C010481.2 Cucumis melo HOM05D000555 ORTHO05D001906 9.2e-12 75.5 146 34.9
PSO528G0268 Papaver somniferum HOM05D000555 ORTHO05D001906 2.1e-11 74.3 358 27.7
SGA_v2.0_scaffold52G18968 Striga asiatica HOM05D000555 ORTHO05D001906 2.7e-11 73.9 339 26.3
Nitab4.5_0000633g0190 Nicotiana tabacum HOM05D000555 ORTHO05D001906 1.0e-10 72.0 316 25.3
ATR0584G256 Amborella trichopoda HOM05D000555 ORTHO05D001906 1.7e-10 71.2 335 26.3
Sabra02G0065900 Salix brachista HOM05D000555 ORTHO05D001906 2.5e-09 67.4 282 29.4
CsaV3_4G028210 Cucumis sativus L. HOM05D000555 ORTHO05D001906 3.3e-09 67.0 248 27.0
TPR.G8250 Trifolium pratense HOM05D000555 ORTHO05D001906 3.3e-09 67.0 292 27.1
Solyc06g060380.3 Solanum lycopersicum HOM05D000555 ORTHO05D001906 5.6e-09 66.2 96 38.5
AUR62019084 Chenopodium quinoa HOM05D000555 ORTHO05D001906 9.5e-09 65.5 377 27.3
Hund17289 Selenicereus undatus HOM05D000555 ORTHO05D001906 9.5e-09 65.5 374 26.2
PGR042G0600 Punica granatum HOM05D000555 ORTHO05D001906 1.6e-08 64.7 313 24.9
PSO170G2163 Papaver somniferum HOM05D000555 ORTHO05D001906 4.7e-08 63.2 357 25.8
Psat0s6006g0080 Pisum sativum HOM05D000555 ORTHO05D001906 8.1e-08 62.4 98 37.8
Sc02g0006040 Simmondsia chinensis HOM05D000555 ORTHO05D001906 8.1e-08 62.4 362 26.2
Lj4A624T17 Lonicera japonica HOM05D000555 ORTHO05D029891 1.1e-07 62.0 188 32.4
Sopen06g020520 Solanum pennellii HOM05D000555 ORTHO05D001906 1.4e-07 61.6 350 23.7
Migut.C01134 Erythranthe guttata HOM05D000555 ORTHO05D001906 2.3e-07 60.8 166 28.3
Ah.05g171140 Amaranthus hybridus HOM05D000555 ORTHO05D001906 2.6e-06 57.4 102 38.2


User provided reference genes

Program Settings