Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1129600 Malus domestica HOM05D001461 ORTHO05D005534 1.1e-50 203.0 98 100.0
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 8.0e-14 80.5 100 54.0
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.2e-11 72.4 103 45.6
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 4.8e-11 71.2 103 45.6
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 8.3e-11 70.5 100 47.0
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 1.1e-10 70.1 98 50.0
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 1.8e-10 69.3 100 49.0
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.4e-10 68.9 104 44.2
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 2.4e-10 68.9 98 44.9
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 3.1e-10 68.6 98 44.9
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.1e-10 68.6 98 44.9
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 4.1e-10 68.2 98 44.9
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 4.1e-10 68.2 98 44.9
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 5.4e-10 67.8 100 48.0
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 5.4e-10 67.8 98 44.9
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 1.2e-09 66.6 99 48.5
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 1.6e-09 66.2 98 43.9
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.0e-09 65.9 98 43.9
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 2.0e-09 65.9 98 45.9
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 2.0e-09 65.9 98 45.9
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 2.0e-09 65.9 98 45.9
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 3.5e-09 65.1 100 46.0
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 4.5e-09 64.7 100 45.0
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 4.5e-09 64.7 103 43.7
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 5.9e-09 64.3 100 46.0
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 7.7e-09 63.9 105 44.8
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 1.0e-08 63.5 97 44.3
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 1.0e-08 63.5 100 46.0
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 1.0e-08 63.5 103 42.7
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 1.3e-08 63.2 100 45.0
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 1.3e-08 63.2 99 46.5
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 1.7e-08 62.8 98 40.8
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 1.7e-08 62.8 100 43.0
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 2.2e-08 62.4 103 43.7
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 2.2e-08 62.4 101 43.6
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 2.9e-08 62.0 98 42.9
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 2.9e-08 62.0 98 42.9
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 3.8e-08 61.6 103 42.7
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 3.8e-08 61.6 98 41.8
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 3.8e-08 61.6 103 41.7
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 5.0e-08 61.2 98 40.8
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 5.0e-08 61.2 98 41.8
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 5.0e-08 61.2 101 46.5
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 5.0e-08 61.2 100 43.0
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 5.0e-08 61.2 101 45.5
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 5.0e-08 61.2 98 39.8
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 5.0e-08 61.2 99 44.4
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 6.5e-08 60.8 103 43.7
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 6.5e-08 60.8 98 42.9
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 6.5e-08 60.8 98 41.8
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 6.5e-08 60.8 100 46.0
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 8.5e-08 60.5 103 42.7
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 1.1e-07 60.1 103 41.7
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 1.1e-07 60.1 100 43.0
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 1.1e-07 60.1 101 44.6
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 1.1e-07 60.1 98 41.8
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 1.1e-07 60.1 100 45.0
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 1.1e-07 60.1 96 43.8
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 1.5e-07 59.7 100 44.0
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 1.5e-07 59.7 101 45.5
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 1.5e-07 59.7 101 45.5
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 1.9e-07 59.3 99 42.4
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.9e-07 59.3 96 43.8
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.9e-07 59.3 96 43.8
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 1.9e-07 59.3 100 43.0
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 2.5e-07 58.9 100 44.0
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 2.5e-07 58.9 100 42.0
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 3.2e-07 58.5 97 42.3
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 3.2e-07 58.5 99 43.4
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 41.0
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 4.2e-07 58.2 100 43.0
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 5.5e-07 57.8 99 39.4
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 5.5e-07 57.8 99 39.4
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 5.5e-07 57.8 96 37.5
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 7.2e-07 57.4 100 43.0
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 7.2e-07 57.4 96 46.9
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 7.2e-07 57.4 102 41.2
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 7.2e-07 57.4 100 42.0
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 9.4e-07 57.0 102 43.1
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 9.4e-07 57.0 100 42.0
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 1.6e-06 56.2 99 44.4
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 1.6e-06 56.2 99 44.4
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 1.6e-06 56.2 99 44.4
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 1.6e-06 56.2 100 40.0
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 1.6e-06 56.2 100 41.0
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 1.6e-06 56.2 97 38.1
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 2.7e-06 55.5 96 42.7
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 3.6e-06 55.1 96 41.7
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 3.6e-06 55.1 100 40.0
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 4.7e-06 54.7 98 42.9
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 4.7e-06 54.7 98 40.8
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 4.7e-06 54.7 98 40.8
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 4.7e-06 54.7 98 40.8
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 6.1e-06 54.3 100 41.0
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 6.1e-06 54.3 96 37.5
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 6.1e-06 54.3 100 40.0
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 8.0e-06 53.9 96 40.6
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 8.0e-06 53.9 100 42.0


User provided reference genes

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