Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 3.1e-309 1064.3 537 100.0
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 1.4e-274 949.1 539 90.2
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 2.2e-246 855.5 544 81.1
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 2.9e-222 775.4 542 74.9
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 1.3e-219 766.5 543 74.2
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 2.1e-217 759.2 542 73.4
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 1.3e-211 740.0 561 70.8
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 2.4e-205 719.2 542 69.6
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 1.5e-199 699.9 548 68.8
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 3.2e-197 692.2 559 66.5
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 3.5e-196 688.7 553 68.4
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 3.5e-196 688.7 543 67.4
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 1.0e-195 687.2 551 66.8
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 6.6e-195 684.5 546 67.9
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 1.1e-194 683.7 542 68.3
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 3.8e-190 668.7 555 66.3
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 5.4e-189 664.8 543 67.8
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 2.3e-187 659.4 539 65.1
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 3.3e-186 655.6 551 65.5
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 4.0e-184 648.7 544 63.1
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 9.0e-184 647.5 544 63.8
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 9.9e-183 644.0 550 64.4
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 9.9e-183 644.0 543 62.4
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 4.9e-182 641.7 544 62.7
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 9.3e-181 637.5 548 62.8
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 1.6e-180 636.7 546 63.2
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 2.7e-180 636.0 547 62.9
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 6.0e-180 634.8 553 62.0
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 1.4e-176 623.6 557 62.7
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 3.4e-175 619.0 540 61.7
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 2.4e-173 612.8 547 60.7
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 3.5e-172 609.0 553 59.5
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 6.0e-172 608.2 553 58.8
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 7.9e-172 607.8 541 60.8
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 7.9e-172 607.8 562 60.1
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 1.3e-171 607.1 544 61.8
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 1.8e-171 606.7 563 58.4
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 1.8e-171 606.7 551 58.4
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 1.8e-171 606.7 539 60.3
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 3.0e-171 605.9 553 58.4
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 3.0e-171 605.9 550 59.3
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 3.9e-171 605.5 539 60.1
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 1.1e-170 604.0 547 61.1
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 4.3e-170 602.1 556 59.9
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 9.6e-170 600.9 555 58.7
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 1.3e-169 600.5 537 58.8
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 1.6e-169 600.1 554 57.8
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 2.8e-169 599.4 550 60.5
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 4.8e-169 598.6 550 58.7
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 8.1e-169 597.8 554 57.6
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 8.1e-169 597.8 515 61.7
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 1.8e-168 596.7 549 57.2
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 3.1e-168 595.9 550 57.1
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 3.1e-168 595.9 546 59.5
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 4.0e-168 595.5 553 58.0
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 4.5e-167 592.0 549 61.0
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 1.3e-166 590.5 544 59.7
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 2.2e-166 589.7 549 58.7
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 2.2e-166 589.7 549 59.9
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 3.8e-166 589.0 555 58.4
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 6.5e-166 588.2 542 59.2
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 8.4e-166 587.8 534 59.7
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 1.9e-165 586.6 539 60.7
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 3.2e-165 585.9 560 57.1
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 4.2e-165 585.5 548 56.8
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 5.5e-165 585.1 535 60.6
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 5.5e-165 585.1 540 59.1
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 9.3e-165 584.3 539 60.3
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 1.8e-163 580.1 560 56.8
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 3.0e-163 579.3 542 60.1
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 5.1e-163 578.6 557 55.5
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 5.1e-163 578.6 545 58.0
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 1.1e-162 577.4 538 59.9
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 3.3e-162 575.9 560 57.1
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 4.3e-162 575.5 554 59.2
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 1.3e-161 573.9 546 58.2
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 1.4e-160 570.5 555 57.7
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 5.3e-160 568.5 563 54.9
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.5e-159 567.0 489 61.6
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 2.6e-159 566.2 544 57.0
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 1.7e-158 563.5 618 53.2
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 2.2e-158 563.1 551 57.2
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 3.8e-158 562.4 550 55.5
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 2.5e-157 559.7 557 55.1
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 4.2e-157 558.9 557 55.5
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 7.2e-157 558.1 493 60.2
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 6.1e-156 555.1 541 55.6
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 3.0e-155 552.7 610 52.5
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 5.1e-155 552.0 577 54.8
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 1.7e-150 537.0 516 57.2
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 8.5e-150 534.6 576 53.5
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 1.4e-149 533.9 553 54.1
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 1.9e-149 533.5 555 53.7
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 3.2e-149 532.7 497 55.7
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 5.5e-149 531.9 551 53.7
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 9.4e-149 531.2 490 58.2
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 2.3e-147 526.6 477 61.6
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 1.5e-146 523.9 467 60.0
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 5.7e-146 521.9 522 57.9
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 5.7e-146 521.9 500 57.0
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 4.1e-144 515.8 545 53.0
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 2.0e-143 513.5 575 49.6
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 5.0e-142 508.8 604 48.3
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 3.9e-139 499.2 467 56.1
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 8.8e-139 498.0 493 58.2
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 3.3e-138 496.1 458 62.2
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 1.3e-137 494.2 529 51.8
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 1.7e-137 493.8 532 51.5
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 6.3e-137 491.9 536 49.8
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 5.3e-136 488.8 518 51.7
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 2.0e-135 486.9 545 49.7
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 2.2e-134 483.4 489 51.9
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 1.8e-131 473.8 561 50.6
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 6.7e-131 471.9 559 48.1
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 1.1e-130 471.1 544 51.1
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 1.6e-119 434.1 547 45.7
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 3.5e-119 433.0 555 46.7
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 1.6e-116 424.1 445 53.7
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 2.0e-114 417.2 457 54.7
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 1.6e-111 407.5 499 49.9
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 3.3e-109 399.8 571 42.4
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 3.3e-109 399.8 571 42.4
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 3.3e-109 399.8 572 43.0
Haze_21911 Corylus avellana HOM05D004583 ORTHO05D005469 4.3e-109 399.4 324 66.7
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 9.8e-106 388.3 537 43.2
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 9.8e-106 388.3 496 44.0
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 4.9e-105 386.0 581 40.6
Atru.chr7.2059 Acer truncatum HOM05D004583 ORTHO05D005469 9.2e-104 381.7 329 62.9
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 1.9e-93 347.4 553 40.0
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 1.6e-92 344.4 467 47.5
CDE02G1982 Ceratophyllum demersum HOM05D004583 ORTHO05D001336 3.5e-87 326.6 357 50.4
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 4.3e-77 293.1 698 33.0
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 1.7e-73 281.2 448 41.5
Cpa.g.sc7.206 Carica papaya HOM05D004583 ORTHO05D005469 1.2e-71 275.0 168 75.0
MBI04_g32315_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 1.6e-71 274.6 181 69.1
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 3.0e-70 270.4 616 32.0
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 4.8e-68 263.1 604 32.9
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 8.1e-68 262.3 397 45.6
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 6.9e-51 206.1 186 62.4
Cpa.g.c37634 Carica papaya HOM05D004583 ORTHO05D005469 6.9e-51 206.1 258 50.8
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 1.0e-46 192.2 155 67.7
TPR.G9691 Trifolium pratense HOM05D004583 ORTHO05D005469 3.0e-46 190.7 193 49.2
Aqoxy6G01950 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 5.7e-45 186.4 276 45.3
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 6.5e-41 172.9 152 60.5
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 1.6e-36 158.3 167 53.9
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 5.3e-35 153.3 98 66.3
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 1.5e-34 151.8 147 60.5
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 2.2e-33 147.9 136 61.0
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 4.8e-28 130.2 153 48.4
Aqoxy6G01951 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 6.5e-25 119.8 94 63.8
PRCOL_00000859 Prasinoderma coloniale HOM05D004583 ORTHO05D005469 6.7e-22 109.8 180 33.9
MCO16G603 Micromonas commoda HOM05D004583 ORTHO05D005469 3.3e-21 107.5 170 33.5
HPP92_022972 Vanilla planifolia HOM05D004583 ORTHO05D005469 3.7e-20 104.0 100 57.0
TPR.G7872 Trifolium pratense HOM05D004583 ORTHO05D005469 1.3e-17 95.5 102 48.0
Duzib150G0365 Durio zibethinus HOM05D004583 ORTHO05D005469 1.0e-14 85.9 68 55.9
Cpa.g.c46051 Carica papaya HOM05D004583 ORTHO05D005469 1.6e-10 72.0 39 76.9
Cre13.g585651 Chlamydomonas reinhardtii HOM05D004583 ORTHO05D005469 1.0e-06 59.3 115 39.1


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