Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 7.4e-83 310.5 153 100.0
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.7e-58 229.6 148 80.4
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.0e-47 193.7 146 69.2
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 7.2e-46 187.6 148 68.2
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 7.2e-46 187.6 147 68.7
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 3.6e-45 185.3 147 67.3
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 3.4e-43 178.7 145 66.9
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 2.2e-42 176.0 148 65.5
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 1.8e-41 172.9 146 64.4
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 4.1e-41 171.8 154 60.4
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 7.0e-41 171.0 147 64.6
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 9.2e-41 170.6 147 63.9
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 9.2e-41 170.6 146 63.0
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 9.2e-41 170.6 143 64.3
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 1.2e-40 170.2 152 59.2
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 1.6e-40 169.9 146 65.1
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 1.6e-40 169.9 159 61.0
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 4.5e-40 168.3 114 75.4
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 4.5e-40 168.3 147 63.9
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 7.7e-40 167.5 144 63.9
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.3e-39 166.8 146 60.3
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 1.3e-39 166.8 147 62.6
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 6.6e-39 164.5 95 81.1
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 6.6e-39 164.5 143 60.1
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 8.6e-39 164.1 149 62.4
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 8.6e-39 164.1 143 57.3
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 1.1e-38 163.7 148 62.8
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 1.1e-38 163.7 148 61.5
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 1.5e-38 163.3 155 58.7
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 3.3e-38 162.2 149 61.1
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 3.3e-38 162.2 103 77.7
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 3.3e-38 162.2 106 74.5
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 4.3e-38 161.8 105 76.2
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 4.3e-38 161.8 110 71.8
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 7.3e-38 161.0 95 77.9
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 7.3e-38 161.0 95 77.9
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 7.3e-38 161.0 95 78.9
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.1e-37 159.5 95 76.8
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 3.6e-37 158.7 106 72.6
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 4.7e-37 158.3 141 59.6
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 4.7e-37 158.3 103 73.8
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 6.1e-37 157.9 159 54.7
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 1.0e-36 157.1 144 56.9
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.0e-36 157.1 113 69.9
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.0e-36 157.1 121 67.8
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.4e-36 156.8 100 74.0
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 1.8e-36 156.4 95 75.8
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 2.3e-36 156.0 103 72.8
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 4.0e-36 155.2 108 68.5
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 6.8e-36 154.5 103 73.8
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.5e-35 153.3 146 58.9
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.0e-35 152.9 94 77.7
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 2.6e-35 152.5 95 73.7
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 5.7e-35 151.4 150 58.7
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 7.5e-35 151.0 142 59.2
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 7.5e-35 151.0 149 57.7
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 7.5e-35 151.0 144 53.5
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 1.3e-34 150.2 145 57.2
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 9.2e-33 144.1 96 72.9
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 1.2e-32 143.7 147 55.1
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.6e-32 143.3 128 60.2
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 2.0e-32 142.9 108 63.9
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 2.0e-32 142.9 155 48.4
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 4.6e-32 141.7 95 68.4
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.7e-31 139.8 101 67.3
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 1.7e-31 139.8 105 61.9
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 1.7e-31 139.8 172 53.5
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.7e-31 139.8 147 54.4
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 2.3e-31 139.4 144 52.8
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 2.3e-31 139.4 147 53.1
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 2.3e-31 139.4 95 67.4
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 3.0e-31 139.0 149 51.0
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 3.0e-31 139.0 149 51.0
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 3.0e-31 139.0 95 66.3
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 3.0e-31 139.0 147 56.5
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 3.9e-31 138.7 140 55.7
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 5.0e-31 138.3 105 61.9
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 5.0e-31 138.3 128 57.8
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 6.6e-31 137.9 105 61.9
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.1e-30 137.1 101 65.3
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.1e-30 137.1 114 57.9
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 1.5e-30 136.7 141 53.9
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 1.9e-30 136.3 117 58.1
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 2.5e-30 136.0 114 56.1
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 4.3e-30 135.2 96 68.8
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 5.6e-30 134.8 96 66.7
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 7.3e-30 134.4 139 54.7
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 1.6e-29 133.3 92 67.4
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 1.6e-29 133.3 92 67.4
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 2.1e-29 132.9 96 68.8
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 2.1e-29 132.9 95 65.3
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 2.1e-29 132.9 92 67.4
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 2.1e-29 132.9 106 62.3
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 2.8e-29 132.5 92 66.3
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 2.8e-29 132.5 95 65.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 3.6e-29 132.1 120 62.5
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 6.2e-29 131.3 110 54.5
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.0e-28 130.6 95 61.1
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.4e-28 130.2 93 67.7
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 2.3e-28 129.4 95 64.2
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 3.1e-28 129.0 92 65.2
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 4.0e-28 128.6 147 49.0
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 4.4e-27 125.2 91 63.7
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 7.5e-27 124.4 163 44.2
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 8.3e-26 120.9 92 66.3
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 1.3e-23 113.6 72 75.0
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 2.1e-21 106.3 107 59.8
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 4.7e-21 105.1 134 44.8
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.4e-20 103.6 180 36.7
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 6.8e-20 101.3 91 57.1
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 1.2e-19 100.5 95 56.8
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 1.2e-19 100.5 60 75.0
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 4.4e-19 98.6 55 81.8
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 1.3e-18 97.1 104 48.1
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 2.4e-17 92.8 133 38.3
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.2e-16 90.5 98 58.2
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 2.3e-15 86.3 110 38.2
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 6.6e-15 84.7 96 43.8
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.2e-11 73.9 46 71.7
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 6.4e-10 68.2 101 39.6
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.9e-09 66.6 121 37.2
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 3.0e-07 59.3 95 35.8


User provided reference genes

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