Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 1.9e-177 625.9 359 100.0
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 7.9e-152 540.8 365 81.9
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 2.8e-141 505.8 359 74.9
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 2.0e-139 499.6 359 74.4
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 1.3e-138 496.9 359 74.1
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 7.2e-137 491.1 361 75.6
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 2.1e-136 489.6 359 76.0
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 2.6e-134 482.6 359 73.5
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 7.4e-134 481.1 351 73.5
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 1.1e-132 477.2 359 72.7
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.4e-132 476.9 359 70.2
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 4.1e-132 475.3 358 73.5
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.0e-131 473.0 359 73.5
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.0e-131 473.0 359 73.5
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 2.0e-131 473.0 359 72.1
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 2.6e-131 472.6 359 73.3
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 3.5e-131 472.2 360 73.9
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.9e-129 466.5 369 66.7
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 2.5e-129 466.1 359 66.6
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 2.5e-129 466.1 359 71.6
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.1e-128 463.0 359 71.9
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 3.6e-128 462.2 359 69.4
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 1.0e-127 460.7 359 71.9
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 1.4e-127 460.3 359 72.1
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 5.2e-127 458.4 337 74.2
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 6.7e-127 458.0 359 71.3
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 1.7e-125 453.4 359 66.9
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 2.8e-125 452.6 359 66.9
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 2.8e-125 452.6 360 66.4
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 2.8e-125 452.6 362 67.1
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 7.0e-124 448.0 359 67.1
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 7.0e-124 448.0 359 68.5
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 1.2e-123 447.2 361 67.9
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 1.6e-123 446.8 362 72.1
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.0e-122 444.1 360 65.3
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.7e-122 443.4 362 66.6
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 4.2e-121 438.7 359 71.0
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 5.5e-121 438.3 360 67.2
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 7.2e-121 438.0 359 66.6
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 1.6e-120 436.8 359 66.3
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 2.1e-120 436.4 359 65.5
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 2.7e-120 436.0 360 68.1
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.2e-118 430.6 359 64.9
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 2.0e-118 429.9 359 67.1
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 2.0e-118 429.9 359 64.9
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.3e-117 427.2 337 70.9
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 4.8e-117 425.2 360 63.6
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 8.3e-117 424.5 359 64.6
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 4.1e-116 422.2 360 67.8
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 5.3e-116 421.8 359 67.7
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 1.2e-115 420.6 363 62.8
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 3.5e-115 419.1 359 63.2
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 4.5e-115 418.7 369 65.9
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 5.9e-115 418.3 361 65.1
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 7.7e-115 417.9 360 65.0
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 3.8e-114 415.6 363 61.2
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 1.5e-113 413.7 359 66.6
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 1.9e-113 413.3 361 66.2
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 1.4e-111 407.1 369 62.6
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 1.8e-111 406.8 359 62.4
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 4.0e-111 405.6 341 63.9
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 1.5e-110 403.7 359 66.0
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 3.4e-110 402.5 359 60.7
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 6.3e-109 398.3 361 62.3
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 5.9e-107 391.7 369 58.8
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 1.7e-106 390.2 361 59.0
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 1.7e-106 390.2 371 59.6
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 2.9e-106 389.4 370 61.9
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 3.8e-106 389.0 364 58.8
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 5.5e-105 385.2 363 59.5
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 6.1e-104 381.7 369 57.5
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 7.5e-102 374.8 361 66.2
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 2.8e-101 372.9 337 61.1
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 3.7e-101 372.5 361 60.1
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 1.8e-100 370.2 376 56.1
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 3.1e-100 369.4 373 55.8
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 7.0e-100 368.2 372 56.5
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 9.2e-100 367.9 384 55.5
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 2.0e-99 366.7 372 58.6
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 2.7e-99 366.3 370 58.9
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 6.6e-98 361.7 369 57.7
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.0e-95 354.4 370 57.6
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.4e-95 354.0 372 57.5
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 1.8e-95 353.6 368 57.9
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 2.6e-94 349.7 359 61.3
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 4.4e-94 349.0 337 62.6
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 5.8e-94 348.6 369 57.7
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 7.5e-94 348.2 344 58.4
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 2.9e-93 346.3 344 57.3
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.4e-92 344.0 363 56.7
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 9.2e-92 341.3 371 57.7
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 9.2e-92 341.3 371 57.7
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.1e-87 327.8 361 57.6
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 1.1e-87 327.8 267 61.8
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 3.6e-80 302.8 372 48.7
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 4.0e-79 299.3 199 72.4
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 4.6e-75 285.8 358 49.2
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 4.3e-73 279.3 302 54.6
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 3.6e-72 276.2 370 47.0
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.0e-66 258.1 362 46.4
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 8.7e-66 255.0 373 41.3
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 4.3e-65 252.7 363 46.0
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 2.3e-42 177.2 194 53.1
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 8.7e-42 175.3 363 38.6
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.0e-30 137.5 339 34.8
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 9.4e-20 102.1 331 29.9
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 2.8e-16 90.5 45 88.9
Cre07.g355700 Chlamydomonas reinhardtii HOM05D007019 ORTHO05D008398 7.4e-09 65.9 250 32.8
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 4.1e-07 60.1 65 44.6
MD02G1012700 Malus domestica HOM05D004574 ORTHO05D005612 7.0e-07 59.3 65 40.0
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 9.1e-07 58.9 53 49.1
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 9.1e-07 58.9 49 53.1
SEGI_33529 Sequoiadendron giganteum HOM05D004574 ORTHO05D005612 9.1e-07 58.9 60 45.0
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 1.2e-06 58.5 130 32.3
Lalb_Chr07g0179541 Lupinus albus HOM05D004574 ORTHO05D005612 1.2e-06 58.5 46 54.3
MBI14_g15649_MAGBIO Magnolia biondii HOM05D004574 ORTHO05D005612 1.2e-06 58.5 67 41.8
DCAR_017762 Daucus carota HOM05D004574 ORTHO05D005612 1.6e-06 58.2 53 47.2
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 1.6e-06 58.2 57 45.6
Nitab4.5_0001151g0100 Nicotiana tabacum HOM05D004574 ORTHO05D005612 2.6e-06 57.4 54 48.1
Nitab4.5_0001671g0130 Nicotiana tabacum HOM05D004574 ORTHO05D005612 2.6e-06 57.4 54 48.1
DCAR_014931 Daucus carota HOM05D004574 ORTHO05D005612 3.5e-06 57.0 53 47.2
PGR102G2914 Punica granatum HOM05D004574 ORTHO05D005612 3.5e-06 57.0 89 39.3
EL10Ac8g18810 Beta vulgaris HOM05D004574 ORTHO05D005612 4.5e-06 56.6 61 44.3
Aqoxy7G03519 Aquilegia oxysepala HOM05D004574 ORTHO05D005612 5.9e-06 56.2 54 48.1
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 5.9e-06 56.2 50 52.0
HPP92_005314 Vanilla planifolia HOM05D004574 ORTHO05D005612 5.9e-06 56.2 69 37.7
HPP92_005340 Vanilla planifolia HOM05D004574 ORTHO05D005612 5.9e-06 56.2 69 37.7
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 7.7e-06 55.8 82 37.8
CiPaw.16G117400 Carya illinoinensis HOM05D004574 ORTHO05D005612 7.7e-06 55.8 52 50.0
Manes.14G139500 Manihot esculenta HOM05D004574 ORTHO05D005612 7.7e-06 55.8 46 52.2


User provided reference genes

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