Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 1.3e-123 446.4 237 100.0
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 5.6e-114 414.5 237 91.6
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 1.8e-99 366.3 239 83.3
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 3.1e-88 328.9 237 76.8
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 3.4e-87 325.5 237 75.9
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 1.6e-76 290.0 224 67.0
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 2.3e-75 286.2 239 65.7
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 1.7e-73 280.0 249 61.0
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 8.2e-73 277.7 245 62.0
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 2.4e-72 276.2 246 61.4
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 2.9e-70 269.2 250 60.8
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 3.8e-70 268.9 236 65.7
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 3.8e-70 268.9 225 62.7
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 6.5e-70 268.1 229 64.6
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 6.5e-70 268.1 221 63.8
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 1.5e-69 266.9 217 64.1
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 1.5e-69 266.9 240 62.5
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 1.9e-69 266.5 233 62.2
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 4.2e-69 265.4 236 62.3
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 4.2e-69 265.4 226 62.4
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 7.2e-69 264.6 190 70.5
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 9.4e-69 264.2 236 61.9
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 9.4e-69 264.2 225 62.2
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 1.2e-68 263.8 217 63.1
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 1.2e-68 263.8 230 62.2
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 1.6e-68 263.5 224 60.3
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 1.6e-68 263.5 223 63.7
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 3.6e-68 262.3 235 63.4
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 6.1e-68 261.5 245 60.8
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 1.4e-67 260.4 223 62.8
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 2.3e-67 259.6 232 62.1
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 3.0e-67 259.2 246 61.8
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 5.2e-67 258.5 223 60.1
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 3.7e-65 252.3 226 58.8
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 1.8e-64 250.0 230 60.4
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 1.8e-64 250.0 230 59.1
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 2.4e-64 249.6 223 58.3
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 5.3e-64 248.4 242 59.1
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 5.9e-63 245.0 230 61.3
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 7.7e-63 244.6 229 59.4
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 1.0e-62 244.2 237 61.6
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 1.3e-62 243.8 230 60.0
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 1.7e-62 243.4 235 57.0
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.7e-62 243.4 238 60.1
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 2.9e-62 242.7 218 60.1
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 5.0e-62 241.9 235 56.2
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 6.5e-62 241.5 222 58.6
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 4.2e-61 238.8 210 63.3
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 7.2e-61 238.0 202 64.4
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.6e-60 236.9 211 57.8
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 3.6e-60 235.7 214 58.4
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 3.6e-60 235.7 227 56.8
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.1e-60 235.0 237 60.8
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 6.1e-60 235.0 233 57.5
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 3.0e-59 232.6 197 61.9
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 8.8e-59 231.1 230 56.5
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.2e-58 230.7 212 60.8
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 2.6e-58 229.6 191 63.4
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 3.4e-58 229.2 238 58.0
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 7.5e-58 228.0 193 62.7
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.2e-57 226.5 228 54.4
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 2.8e-57 226.1 192 61.5
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 3.7e-57 225.7 213 60.1
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 4.8e-57 225.3 190 61.1
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 4.8e-57 225.3 216 56.9
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 6.3e-57 224.9 228 57.0
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 8.3e-57 224.6 190 60.5
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 1.1e-56 224.2 214 56.1
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.4e-56 223.8 198 59.6
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 1.8e-56 223.4 228 56.6
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 3.1e-56 222.6 191 61.3
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 4.1e-56 222.2 158 69.6
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 7.0e-56 221.5 191 60.2
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 7.0e-56 221.5 191 60.2
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 9.1e-56 221.1 191 61.3
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 9.1e-56 221.1 163 68.1
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 2.0e-55 219.9 232 53.9
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.3e-54 217.2 233 54.5
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 2.3e-54 216.5 182 60.4
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 2.9e-54 216.1 191 59.2
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 4.7e-52 208.8 270 50.0
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 9.8e-50 201.1 193 58.5
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 4.9e-49 198.7 177 58.2
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 1.2e-47 194.1 222 51.4
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 8.0e-44 181.4 124 69.4
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.2e-42 177.6 203 46.8
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 4.4e-42 175.6 226 44.2
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 4.9e-41 172.2 222 46.8
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 1.4e-40 170.6 194 54.1
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.4e-40 170.6 223 45.7
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 2.7e-39 166.4 149 59.7
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 3.3e-37 159.5 194 44.3
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 1.8e-35 153.7 211 46.4
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 2.3e-35 153.3 191 46.1
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 9.8e-34 147.9 89 82.0
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 1.4e-32 144.1 168 42.9
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 6.0e-31 138.7 96 70.8
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 9.5e-29 131.3 91 71.4
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 4.7e-28 129.0 134 51.5
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.1e-27 127.9 97 68.0
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 1.1e-27 127.9 188 41.5
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 1.2e-20 104.4 109 53.2
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 2.8e-20 103.2 236 31.8
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 3.1e-19 99.8 131 47.3
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.5e-13 80.9 54 72.2
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 1.2e-07 61.2 95 44.2
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 6.0e-07 58.9 45 60.0
Ah.05g167420 Amaranthus hybridus HOM05D007221 ORTHO05D009204 3.9e-06 56.2 42 57.1


User provided reference genes

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