Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 5.3e-51 204.1 109 100.0
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 2.6e-42 175.3 109 86.2
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 9.4e-40 166.8 109 84.4
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 5.2e-38 161.0 109 73.4
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 2.6e-37 158.7 105 77.1
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 2.6e-37 158.7 109 78.0
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 9.7e-37 156.8 108 76.9
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 4.8e-36 154.5 106 75.5
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 1.1e-35 153.3 108 75.0
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 1.4e-35 152.9 106 74.5
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 4.1e-35 151.4 108 75.0
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 7.0e-35 150.6 110 73.6
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 1.6e-34 149.4 106 72.6
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 2.0e-34 149.1 109 72.5
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 2.7e-34 148.7 109 73.4
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 2.7e-34 148.7 106 72.6
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 3.5e-34 148.3 105 72.4
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 4.5e-34 147.9 110 73.6
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 4.5e-34 147.9 100 75.0
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 5.9e-34 147.5 109 74.3
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 2.2e-33 145.6 113 70.8
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 2.9e-33 145.2 109 68.8
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 3.8e-33 144.8 112 70.5
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 5.0e-33 144.4 101 75.2
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 6.5e-33 144.1 109 69.7
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 1.1e-32 143.3 106 73.6
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 1.1e-32 143.3 106 73.6
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 3.2e-32 141.7 109 70.6
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 3.2e-32 141.7 101 75.2
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 3.2e-32 141.7 109 69.7
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 3.2e-32 141.7 109 69.7
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 4.2e-32 141.4 109 69.7
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 5.5e-32 141.0 110 68.2
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 1.2e-31 139.8 109 68.8
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 1.6e-31 139.4 109 70.6
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 1.6e-31 139.4 109 68.8
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 2.1e-31 139.0 108 70.4
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 4.7e-31 137.9 106 70.8
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 6.1e-31 137.5 109 67.0
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 6.1e-31 137.5 110 66.4
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 1.4e-30 136.3 106 64.2
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 1.8e-30 136.0 109 68.8
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 2.3e-30 135.6 103 66.0
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 3.0e-30 135.2 109 64.2
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 6.8e-30 134.0 106 63.2
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 6.8e-30 134.0 109 64.2
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 8.8e-30 133.7 108 65.7
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 2.0e-29 132.5 110 66.4
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 2.0e-29 132.5 108 67.6
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 4.4e-29 131.3 105 67.6
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 4.4e-29 131.3 106 67.9
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 5.7e-29 131.0 102 66.7
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 5.7e-29 131.0 102 65.7
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 7.5e-29 130.6 108 63.9
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 1.3e-28 129.8 108 63.9
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 2.8e-28 128.6 103 65.0
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 2.8e-28 128.6 103 63.1
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 6.3e-28 127.5 106 66.0
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 1.1e-27 126.7 112 63.4
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 1.4e-27 126.3 104 66.3
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 1.8e-27 125.9 109 63.3
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 2.4e-27 125.6 109 58.7
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 3.1e-27 125.2 108 63.9
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 5.4e-27 124.4 108 62.0
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 3.5e-26 121.7 102 62.7
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 4.5e-26 121.3 104 64.4
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 4.5e-26 121.3 109 61.5
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 7.7e-26 120.6 109 62.4
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 2.3e-25 119.0 91 64.8
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 3.8e-25 118.2 101 56.4
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 3.8e-25 118.2 101 56.4
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 3.8e-25 118.2 106 57.5
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 5.0e-25 117.9 93 64.5
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 1.9e-24 115.9 113 56.6
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 2.5e-24 115.5 80 72.5
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 2.5e-24 115.5 113 56.6
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 2.5e-24 115.5 86 65.1
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 2.5e-24 115.5 109 56.9
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 7.2e-24 114.0 113 55.8
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 9.5e-24 113.6 109 58.7
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 1.2e-23 113.2 109 56.9
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 1.6e-23 112.8 113 54.9
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 6.1e-23 110.9 113 55.8
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 1.8e-22 109.4 113 54.0
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 2.3e-22 109.0 86 59.3
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 4.0e-22 108.2 113 52.2
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 5.2e-22 107.8 109 56.0
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 6.8e-22 107.5 113 54.0
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 2.0e-21 105.9 113 53.1
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 2.0e-21 105.9 113 53.1
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 2.0e-21 105.9 113 53.1
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 2.0e-21 105.9 113 53.1
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 2.0e-21 105.9 113 53.1
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 2.0e-21 105.9 113 53.1
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 5.7e-21 104.4 113 53.1
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 6.3e-20 100.9 88 56.8
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 8.3e-20 100.5 86 58.1
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 1.1e-19 100.1 108 50.9
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 2.4e-19 99.0 109 49.5
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 5.9e-18 94.4 93 52.7
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 4.9e-12 74.7 84 42.9
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 1.9e-11 72.8 71 53.5
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 1.9e-11 72.8 71 53.5
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 5.4e-11 71.2 87 46.0
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 2.7e-10 68.9 89 39.3
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 1.0e-09 67.0 53 62.3


User provided reference genes

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