Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1307500 Malus domestica HOM05D003872 ORTHO05D004592 3.1e-40 167.9 81 100.0
MD07G1308100 Malus domestica HOM05D003872 ORTHO05D004592 1.2e-26 122.9 62 98.4
MD01G1235300 Malus domestica HOM05D003872 ORTHO05D004592 4.0e-19 97.8 62 82.3
Prupe.6G242100 Prunus persica HOM05D003872 ORTHO05D004592 2.0e-18 95.5 58 81.0
Prupe.2G325300 Prunus persica HOM05D003872 ORTHO05D004592 5.4e-16 87.4 68 67.6
QL09p024519 Quercus lobata HOM05D003872 ORTHO05D004592 1.1e-11 73.2 63 55.6
Cfa015874 Carpinus fangiana HOM05D003872 ORTHO05D004592 5.2e-11 70.9 63 55.6
FAN10G4058 Fragaria x ananassa HOM05D003872 ORTHO05D004592 6.8e-11 70.5 68 60.3
FAN03G3493 Fragaria x ananassa HOM05D003872 ORTHO05D004592 8.9e-11 70.1 68 60.3
FvH4_7g33880 Fragaria vesca HOM05D003872 ORTHO05D004592 1.2e-10 69.7 68 60.3
Haze_00615 Corylus avellana HOM05D003872 ORTHO05D004592 1.5e-10 69.3 57 59.6
FAN01G2295 Fragaria x ananassa HOM05D003872 ORTHO05D004592 1.5e-10 69.3 68 60.3
Manes.09G124700 Manihot esculenta HOM05D003872 ORTHO05D004592 6.4e-09 63.9 65 56.9
GSVIVG01024416001 Vitis vinifera HOM05D003872 ORTHO05D004592 1.1e-08 63.2 57 56.1
CiPaw.06G019100 Carya illinoinensis HOM05D003872 ORTHO05D004592 2.4e-08 62.0 63 47.6
Manes.08G162800 Manihot esculenta HOM05D003872 ORTHO05D004592 3.2e-08 61.6 64 53.1
TAR374G1229 Trochodendron aralioides HOM05D003872 ORTHO05D004592 4.1e-08 61.2 56 55.4
Hma1.2p1_0758F.1_g213660 Hydrangea macrophylla HOM05D003872 ORTHO05D004592 7.1e-08 60.5 66 48.5
Potri.013G088400 Populus trichocarpa HOM05D003872 ORTHO05D004592 9.2e-08 60.1 64 51.6
Potri.019G051500 Populus trichocarpa HOM05D003872 ORTHO05D004592 9.2e-08 60.1 63 54.0
TWI34G1659 Tripterygium wilfordii HOM05D003872 ORTHO05D004592 1.2e-07 59.7 54 57.4
Cpa.g.sc39.64 Carica papaya HOM05D003872 ORTHO05D004592 1.6e-07 59.3 58 56.9
COL.COLO4_25305 Corchorus olitorius HOM05D003872 ORTHO05D004592 2.7e-07 58.5 64 51.6
Medtr5g007710 Medicago truncatula HOM05D003872 ORTHO05D004592 6.0e-07 57.4 53 58.5
arahy.Tifrunner.gnm1.ann1.7I89AX Arachis hypogaea HOM05D003872 ORTHO05D004592 1.0e-06 56.6 54 53.7
arahy.Tifrunner.gnm1.ann1.88Y1ZI Arachis hypogaea HOM05D003872 ORTHO05D004592 1.0e-06 56.6 54 53.7
Sabra19G0057100 Salix brachista HOM05D003872 ORTHO05D004592 1.0e-06 56.6 63 49.2
Phvul.002G039400 Phaseolus vulgaris HOM05D003872 ORTHO05D004592 1.7e-06 55.8 62 46.8
RcHm_v2.0_Chr1g0384051 Rosa chinensis HOM05D003872 ORTHO05D004592 3.0e-06 55.1 64 51.6
RcHm_v2.0_Chr1g0384071 Rosa chinensis HOM05D003872 ORTHO05D004592 3.0e-06 55.1 64 51.6
Duzib170G1103 Durio zibethinus HOM05D003872 ORTHO05D004592 5.1e-06 54.3 65 47.7
Ca_24443_v3 Cicer arietinum L. HOM05D003872 ORTHO05D004592 8.6e-06 53.5 53 54.7


User provided reference genes

Program Settings