Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1291600 Malus domestica HOM05D000122 ORTHO05D248446 8.5e-57 223.4 109 100.0
Prupe.2G312500 Prunus persica HOM05D000122 ORTHO05D000139 3.2e-11 72.0 102 45.1
MD07G1291200 Malus domestica HOM05D000122 ORTHO05D000139 5.4e-11 71.2 101 46.5
MD07G1291400 Malus domestica HOM05D000122 ORTHO05D000139 4.6e-10 68.2 101 46.5
MD15G1431600 Malus domestica HOM05D000122 ORTHO05D000139 4.6e-10 68.2 87 50.6
FAN10G2238 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.0e-09 67.0 52 67.3
FAN10G4165 Fragaria x ananassa HOM05D000122 ORTHO05D014632 1.0e-09 67.0 52 67.3
FvH4_7g31861 Fragaria vesca HOM05D000122 ORTHO05D000139 1.3e-09 66.6 52 67.3
FAN01G0198 Fragaria x ananassa HOM05D000122 ORTHO05D020669 1.3e-09 66.6 52 67.3
FAN06G3477 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.3e-09 66.6 52 67.3
MD07G1292500 Malus domestica HOM05D000122 ORTHO05D000139 2.3e-09 65.9 50 70.0
RcHm_v2.0_Chr1g0381091 Rosa chinensis HOM05D000122 ORTHO05D000139 3.0e-09 65.5 52 65.4
FAN03G1175 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.1e-08 63.5 52 65.4
RcHm_v2.0_Chr5g0017271 Rosa chinensis HOM05D000122 ORTHO05D019178 1.1e-08 63.5 42 73.8
RcHm_v2.0_Chr3g0486401 Rosa chinensis HOM05D000122 ORTHO05D019178 1.5e-08 63.2 52 63.5
RcHm_v2.0_Chr1g0324571 Rosa chinensis HOM05D000122 ORTHO05D000139 2.5e-08 62.4 42 71.4
RcHm_v2.0_Chr1g0381131 Rosa chinensis HOM05D000122 ORTHO05D000139 5.6e-08 61.2 52 63.5
RcHm_v2.0_Chr1g0381161 Rosa chinensis HOM05D000122 ORTHO05D014632 7.3e-08 60.8 89 38.2
FAN01G2802 Fragaria x ananassa HOM05D000122 ORTHO05D000139 9.5e-08 60.5 100 39.0
RcHm_v2.0_Chr3g0486311 Rosa chinensis HOM05D000122 ORTHO05D019178 1.6e-07 59.7 52 61.5
FAN06G4440 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.1e-07 59.3 96 38.5
FAN10G2120 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.8e-07 58.9 93 39.8
FAN21G3289 Fragaria x ananassa HOM05D000122 ORTHO05D019178 2.8e-07 58.9 42 69.0
RcHm_v2.0_Chr3g0486281 Rosa chinensis HOM05D000122 ORTHO05D019178 2.8e-07 58.9 51 58.8
FAN11G3488 Fragaria x ananassa HOM05D000122 ORTHO05D019178 4.7e-07 58.2 101 41.6
Prupe.1G162800 Prunus persica HOM05D000122 ORTHO05D000139 4.7e-07 58.2 51 58.8
FvH4_7g31850 Fragaria vesca HOM05D000122 ORTHO05D014632 8.0e-07 57.4 102 37.3
RcHm_v2.0_Chr1g0381211 Rosa chinensis HOM05D000122 ORTHO05D014632 8.0e-07 57.4 82 40.2
FAN06G4599 Fragaria x ananassa HOM05D000122 ORTHO05D014632 1.1e-06 57.0 102 37.3
FAN12G2212 Fragaria x ananassa HOM05D000122 ORTHO05D014632 1.1e-06 57.0 50 56.0
FvH4_7g31950 Fragaria vesca HOM05D000122 ORTHO05D014632 1.4e-06 56.6 98 36.7
FAN10G0191 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.4e-06 56.6 53 52.8
RcHm_v2.0_Chr1g0381141 Rosa chinensis HOM05D000122 ORTHO05D014632 1.4e-06 56.6 98 36.7
FvH4_7g31840 Fragaria vesca HOM05D000122 ORTHO05D014632 2.3e-06 55.8 100 35.0
FAN03G2113 Fragaria x ananassa HOM05D000122 ORTHO05D014632 3.1e-06 55.5 99 35.4
FAN03G2560 Fragaria x ananassa HOM05D000122 ORTHO05D014632 5.2e-06 54.7 99 35.4
MD01G1054600 Malus domestica HOM05D000122 ORTHO05D000139 8.9e-06 53.9 55 54.5


User provided reference genes

Program Settings