Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1271900 Malus domestica HOM05D002352 ORTHO05D003724 1.2e-283 979.2 490 100.0
MD07G1304000 Malus domestica HOM05D002352 ORTHO05D003724 4.0e-154 548.9 623 56.3
MD01G1232200 Malus domestica HOM05D002352 ORTHO05D003724 1.3e-149 533.9 623 55.2
Prupe.1G083500 Prunus persica HOM05D002352 ORTHO05D003724 4.9e-136 488.8 624 51.8
RcHm_v2.0_Chr1g0383361 Rosa chinensis HOM05D002352 ORTHO05D003724 2.3e-133 479.9 620 50.5
FAN03G0871 Fragaria x ananassa HOM05D002352 ORTHO05D003724 2.9e-128 463.0 622 49.4
FAN01G0441 Fragaria x ananassa HOM05D002352 ORTHO05D003724 5.4e-127 458.8 622 48.9
FAN10G0813 Fragaria x ananassa HOM05D002352 ORTHO05D003724 1.2e-126 457.6 622 48.9
FAN10G3833 Fragaria x ananassa HOM05D002352 ORTHO05D003724 1.2e-126 457.6 622 48.9
FvH4_7g33390 Fragaria vesca HOM05D002352 ORTHO05D003724 2.3e-125 453.4 622 48.6
QL05p065250 Quercus lobata HOM05D002352 ORTHO05D003724 8.6e-125 451.4 626 47.4
Cfa000747 Carpinus fangiana HOM05D002352 ORTHO05D003724 1.9e-124 450.3 627 46.6
CiPaw.07G217200 Carya illinoinensis HOM05D002352 ORTHO05D003724 1.2e-123 447.6 626 46.8
Cpa.g.sc192.7 Carica papaya HOM05D002352 ORTHO05D003724 5.2e-122 442.2 638 45.6
Duzib160G0039 Durio zibethinus HOM05D002352 ORTHO05D003724 5.2e-122 442.2 626 46.2
COL.COLO4_22862 Corchorus olitorius HOM05D002352 ORTHO05D003724 8.9e-122 441.4 626 45.5
CiPaw.08G016100 Carya illinoinensis HOM05D002352 ORTHO05D003724 3.4e-121 439.5 626 45.4
Thecc.06G016700 Theobroma cacao HOM05D002352 ORTHO05D003724 4.4e-121 439.1 625 45.9
Dinv07525 Davidia involucrata HOM05D002352 ORTHO05D003724 5.8e-121 438.7 635 44.7
Lj1C1209G5 Lonicera japonica HOM05D002352 ORTHO05D003724 1.7e-120 437.2 607 45.5
Gohir.A05G113200 Gossypium hirsutum HOM05D002352 ORTHO05D003724 2.2e-120 436.8 625 45.8
Haze_05987 Corylus avellana HOM05D002352 ORTHO05D003724 4.9e-120 435.6 613 46.3
Gohir.D05G113700 Gossypium hirsutum HOM05D002352 ORTHO05D003724 8.3e-120 434.9 625 45.4
Gorai.009G117700 Gossypium raimondii HOM05D002352 ORTHO05D003724 1.9e-119 433.7 625 45.4
Manes.16G062100 Manihot esculenta HOM05D002352 ORTHO05D003724 9.2e-119 431.4 627 44.8
CANSAT21G2414 Cannabis sativa HOM05D002352 ORTHO05D003724 1.2e-118 431.0 625 45.4
Lj5g0002534 Lotus japonicus HOM05D002352 ORTHO05D003724 3.5e-118 429.5 635 43.8
Lalb_Chr02g0152081 Lupinus albus HOM05D002352 ORTHO05D003724 3.5e-118 429.5 634 44.0
Lalb_Chr21g0313661 Lupinus albus HOM05D002352 ORTHO05D003724 1.0e-117 427.9 626 44.2
Actinidia07573 Actinidia chinensis HOM05D002352 ORTHO05D003724 1.3e-117 427.6 636 44.0
Ca_10540_v3 Cicer arietinum L. HOM05D002352 ORTHO05D003724 1.3e-117 427.6 623 44.3
Potri.001G443200 Populus trichocarpa HOM05D002352 ORTHO05D003724 1.7e-117 427.2 626 44.6
Dinv40531 Davidia involucrata HOM05D002352 ORTHO05D003724 5.1e-117 425.6 689 42.1
Rhsim02G0123500 Rhododendron simsii HOM05D002352 ORTHO05D003724 6.6e-117 425.2 629 43.9
Phvul.007G099200 Phaseolus vulgaris HOM05D002352 ORTHO05D003724 8.6e-117 424.9 632 43.5
Atru.chr10.646 Acer truncatum HOM05D002352 ORTHO05D003724 2.5e-116 423.3 619 43.9
Psat6g181080 Pisum sativum HOM05D002352 ORTHO05D003724 4.3e-116 422.5 634 43.8
Ciclev10014013m.g Citrus clementina HOM05D002352 ORTHO05D003724 1.2e-115 421.0 618 45.1
Glyma.10G207500 Glycine max HOM05D002352 ORTHO05D003724 2.8e-115 419.9 632 43.4
Glyma.20G183400 Glycine max HOM05D002352 ORTHO05D003724 2.8e-115 419.9 624 43.8
Medtr1g094165 Medicago truncatula HOM05D002352 ORTHO05D003724 2.8e-115 419.9 635 43.1
TPR.G10297 Trifolium pratense HOM05D002352 ORTHO05D003724 4.7e-115 419.1 634 43.2
arahy.Tifrunner.gnm1.ann1.XI7UL2 Arachis hypogaea HOM05D002352 ORTHO05D003724 6.2e-115 418.7 625 43.8
vmacro15889 Vaccinium macrocarpon HOM05D002352 ORTHO05D003724 6.2e-115 418.7 629 42.9
Medtr8g023010 Medicago truncatula HOM05D002352 ORTHO05D003724 1.1e-114 417.9 619 43.0
Eucgr.D00655 Eucalyptus grandis HOM05D002352 ORTHO05D003724 3.1e-114 416.4 651 43.0
TWI60G0805 Tripterygium wilfordii HOM05D002352 ORTHO05D003724 5.2e-114 415.6 644 42.7
Sabra16G0301500 Salix brachista HOM05D002352 ORTHO05D003724 1.5e-113 414.1 663 42.1
Sabra16G0299900 Salix brachista HOM05D002352 ORTHO05D003724 2.6e-113 413.3 663 42.1
CSS0019100 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D003724 4.4e-113 412.5 634 44.0
arahy.Tifrunner.gnm1.ann1.Q9T26T Arachis hypogaea HOM05D002352 ORTHO05D003724 7.6e-113 411.8 643 42.9
Carub.0004s1734 Capsella rubella HOM05D002352 ORTHO05D003724 9.9e-113 411.4 618 43.0
Potri.011G153700 Populus trichocarpa HOM05D002352 ORTHO05D003724 1.7e-112 410.6 630 43.0
AL4G31700 Arabidopsis lyrata HOM05D002352 ORTHO05D003724 2.2e-112 410.2 618 43.4
PGR004G1771 Punica granatum HOM05D002352 ORTHO05D003724 2.2e-112 410.2 650 42.2
AT2G35630 Arabidopsis thaliana HOM05D002352 ORTHO05D003724 3.7e-112 409.5 618 42.9
THA.LOC104798541 Tarenaya hassleriana HOM05D002352 ORTHO05D003724 4.9e-112 409.1 649 42.1
Lj2C285G5 Lonicera japonica HOM05D002352 ORTHO05D003724 1.4e-111 407.5 625 42.2
SGA_v2.0_scaffold100G29641 Striga asiatica HOM05D002352 ORTHO05D003724 1.4e-111 407.5 604 43.0
Sabra11G0146000 Salix brachista HOM05D002352 ORTHO05D003724 3.2e-111 406.4 626 42.5
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 3.2e-111 406.4 630 43.5
Thhalv10016124m.g Eutrema salsugineum HOM05D002352 ORTHO05D003724 7.1e-111 405.2 619 42.2
Nn012s41459 Nelumbo nucifera HOM05D002352 ORTHO05D003724 7.1e-111 405.2 632 43.0
Nn1g06636 Nelumbo nucifera HOM05D002352 ORTHO05D003724 7.1e-111 405.2 632 43.0
Aqoxy1G02582 Aquilegia oxysepala HOM05D002352 ORTHO05D003724 9.2e-111 404.8 630 43.0
Aa31LG9G15920 Aethionema arabicum HOM05D002352 ORTHO05D003724 2.1e-110 403.7 620 42.9
Sp4g17870 Schrenkiella parvula HOM05D002352 ORTHO05D003724 2.7e-110 403.3 620 42.7
TWI32G1048 Tripterygium wilfordii HOM05D002352 ORTHO05D003724 7.8e-110 401.7 626 42.7
Cc02_g12860 Coffea canephora HOM05D002352 ORTHO05D003724 1.3e-109 401.0 629 41.5
Peaxi162Scf00524g00056 Petunia axillaris HOM05D002352 ORTHO05D003724 1.3e-109 401.0 626 42.8
CARHR129850 Cardamine hirsuta HOM05D002352 ORTHO05D003724 1.7e-109 400.6 620 42.7
BraA03t11214Z Brassica rapa HOM05D002352 ORTHO05D003724 3.9e-109 399.4 620 42.4
Solyc02g078640.3 Solanum lycopersicum HOM05D002352 ORTHO05D003724 3.9e-109 399.4 628 41.7
Sopen02g023500 Solanum pennellii HOM05D002352 ORTHO05D003724 3.9e-109 399.4 628 41.7
C03p22870 Brassica napus HOM05D002352 ORTHO05D003724 5.1e-109 399.1 620 42.4
BolC3t14686H Brassica oleracea HOM05D002352 ORTHO05D003724 5.1e-109 399.1 619 42.2
CAN.G1627.24 Capsicum annuum HOM05D002352 ORTHO05D003724 5.1e-109 399.1 628 42.2
HanXRQChr04g0123991 Helianthus annuus HOM05D002352 ORTHO05D003724 5.1e-109 399.1 630 41.7
Hund21252 Selenicereus undatus HOM05D002352 ORTHO05D003724 5.1e-109 399.1 630 41.9
A03p19610 Brassica napus HOM05D002352 ORTHO05D003724 6.6e-109 398.7 620 42.3
CsaV3_6G052730 Cucumis sativus L. HOM05D002352 ORTHO05D003724 8.6e-109 398.3 627 42.7
SalBow8G3229 Salvia bowleyana HOM05D002352 ORTHO05D003724 1.1e-108 397.9 633 41.5
Sed0013080 Sechium edule HOM05D002352 ORTHO05D003724 1.9e-108 397.1 627 43.5
Sc17g0006350 Simmondsia chinensis HOM05D002352 ORTHO05D003724 4.3e-108 396.0 630 41.6
Lalb_Chr21g0313501 Lupinus albus HOM05D002352 ORTHO05D003724 5.6e-108 395.6 588 45.1
MBI19_g16739_MAGBIO Magnolia biondii HOM05D002352 ORTHO05D003724 5.6e-108 395.6 629 42.3
SGA_v2.0_scaffold22G09771 Striga asiatica HOM05D002352 ORTHO05D003724 7.3e-108 395.2 632 41.0
ClCG01G025480 Citrullus lanatus HOM05D002352 ORTHO05D003724 9.6e-108 394.8 615 43.4
MSTRG.7313 Avicennia marina HOM05D002352 ORTHO05D003724 2.1e-107 393.7 633 41.9
BcaB02g09406 Brassica carinata HOM05D002352 ORTHO05D003724 2.8e-107 393.3 620 41.8
Lsat_1_v5_gn_7_19361 Lactuca sativa HOM05D002352 ORTHO05D003724 3.6e-107 392.9 623 41.9
BcaC02g11684 Brassica carinata HOM05D002352 ORTHO05D003724 4.7e-107 392.5 620 41.8
C04p12410 Brassica napus HOM05D002352 ORTHO05D003724 4.7e-107 392.5 629 41.2
BolC4t22889H Brassica oleracea HOM05D002352 ORTHO05D003724 4.7e-107 392.5 620 41.8
BraA05t19946Z Brassica rapa HOM05D002352 ORTHO05D003724 4.7e-107 392.5 620 41.8
PSO541G4457 Papaver somniferum HOM05D002352 ORTHO05D003724 6.2e-107 392.1 628 41.2
A05p10050 Brassica napus HOM05D002352 ORTHO05D003724 1.8e-106 390.6 630 41.1
CDE05G3196 Ceratophyllum demersum HOM05D002352 ORTHO05D003724 1.8e-106 390.6 591 42.1
BcaB01g03895 Brassica carinata HOM05D002352 ORTHO05D003724 2.6e-105 386.7 647 40.8
DCAR_004114 Daucus carota HOM05D002352 ORTHO05D003724 1.1e-103 381.3 633 39.3
Ah.14g089230 Amaranthus hybridus HOM05D002352 ORTHO05D003724 2.4e-103 380.2 639 40.7
AUR62014778 Chenopodium quinoa HOM05D002352 ORTHO05D003724 4.2e-103 379.4 630 40.6
AUR62016965 Chenopodium quinoa HOM05D002352 ORTHO05D003724 4.2e-103 379.4 630 40.8
Nitab4.5_0009488g0020 Nicotiana tabacum HOM05D002352 ORTHO05D003724 1.6e-102 377.5 571 42.7
MELO3C007036.2 Cucumis melo HOM05D002352 ORTHO05D003724 2.1e-102 377.1 620 41.5
Migut.M01176 Erythranthe guttata HOM05D002352 ORTHO05D003724 2.1e-102 377.1 628 40.4
MBI19_g04166_MAGBIO Magnolia biondii HOM05D002352 ORTHO05D003724 2.1e-102 377.1 635 41.4
ECA236G2885 Erigeron canadensis HOM05D002352 ORTHO05D003724 4.6e-102 375.9 631 40.7
HPP92_018014 Vanilla planifolia HOM05D002352 ORTHO05D003724 1.3e-101 374.4 625 41.4
EL10Ac8g20329 Beta vulgaris HOM05D002352 ORTHO05D003724 5.1e-101 372.5 630 39.7
Ah.09g235790 Amaranthus hybridus HOM05D002352 ORTHO05D003724 1.1e-100 371.3 632 40.5
HPP92_026673 Vanilla planifolia HOM05D002352 ORTHO05D003724 3.6e-99 366.3 619 40.9
unitig_46.g18629 Utricularia gibba HOM05D002352 ORTHO05D003724 4.4e-97 359.4 618 37.9
Zm00001eb369050 Zea mays HOM05D002352 ORTHO05D003724 2.9e-96 356.7 628 39.3
Os01g0816400 Oryza sativa ssp. japonica HOM05D002352 ORTHO05D003724 3.8e-96 356.3 628 39.6
ATR1127G018 Amborella trichopoda HOM05D002352 ORTHO05D003724 4.9e-96 355.9 628 38.7
SEGI_02636 Sequoiadendron giganteum HOM05D002352 ORTHO05D003724 9.3e-95 351.7 631 38.2
Zm00001eb149800 Zea mays HOM05D002352 ORTHO05D003724 3.3e-92 343.2 627 38.8
CDE05G2722 Ceratophyllum demersum HOM05D002352 ORTHO05D003724 4.8e-91 339.3 603 38.8
SEGI_16535 Sequoiadendron giganteum HOM05D002352 ORTHO05D003724 2.4e-87 327.0 627 37.0
Lsat_1_v5_gn_7_48800 Lactuca sativa HOM05D002352 ORTHO05D003724 9.6e-84 315.1 599 37.7
SMO230G0112 Selaginella moellendorffii HOM05D002352 ORTHO05D003724 4.2e-79 299.7 622 34.1
AagrBONN_evm.TU.Sc2ySwM_228.3370 Anthoceros agrestis HOM05D002352 ORTHO05D003724 2.8e-75 287.0 637 33.3
Nitab4.5_0003063g0010 Nicotiana tabacum HOM05D002352 ORTHO05D003724 2.3e-69 267.3 535 38.7
TAR626G1549 Trochodendron aralioides HOM05D002352 ORTHO05D003724 8.7e-69 265.4 511 41.1
Pp3c15_23870 Physcomitrium patens HOM05D002352 ORTHO05D003724 1.6e-67 261.2 627 31.9
Pp3c9_24390 Physcomitrium patens HOM05D002352 ORTHO05D003724 2.0e-65 254.2 627 31.7
Mapoly0009s0135 Marchantia polymorpha HOM05D002352 ORTHO05D003724 2.2e-64 250.8 617 30.5
unitig_37.g12343 Utricularia gibba HOM05D002352 ORTHO05D003724 1.3e-59 235.0 554 33.0
GSVIVG01006792001 Vitis vinifera HOM05D002352 ORTHO05D003724 8.2e-59 232.3 324 45.7
CBR_g39205 Chara braunii HOM05D002352 ORTHO05D003724 2.2e-56 224.2 628 27.9
SHI23474 Sapria himalayana HOM05D002352 ORTHO05D003724 8.5e-56 222.2 179 62.6
Oeu043712.2 Olea europaea HOM05D002352 ORTHO05D003724 3.9e-53 213.4 347 40.3
RhsimUnG0043500 Rhododendron simsii HOM05D002352 ORTHO05D003724 1.4e-50 204.9 349 41.5
Rhsim07G0137600 Rhododendron simsii HOM05D002352 ORTHO05D003724 3.5e-41 173.7 177 52.0
HPP92_018074 Vanilla planifolia HOM05D002352 ORTHO05D003724 7.0e-34 149.4 169 50.3
SHI23480 Sapria himalayana HOM05D002352 ORTHO05D016619 2.9e-32 144.1 275 36.7
Lj6g0005213 Lotus japonicus HOM05D002352 ORTHO05D003724 3.8e-32 143.7 178 47.2
HanXRQChr13g0393551 Helianthus annuus HOM05D002352 ORTHO05D003724 1.3e-27 128.6 191 42.9
CSS0022382 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D015016 2.0e-25 121.3 170 44.1
Actinidia39445 Actinidia chinensis HOM05D002352 ORTHO05D003724 3.5e-25 120.6 112 56.2
GSVIVG01002244001 Vitis vinifera HOM05D002352 ORTHO05D003724 4.5e-25 120.2 200 43.0
arahy.Tifrunner.gnm1.ann1.TCII1L Arachis hypogaea HOM05D002352 ORTHO05D000332 2.1e-22 111.3 72 75.0
TPR.G28588 Trifolium pratense HOM05D002352 ORTHO05D014906 5.2e-21 106.7 67 76.1
CSS0011152 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D015016 6.8e-21 106.3 118 50.8
Zm00001eb214370 Zea mays HOM05D002352 ORTHO05D016619 9.8e-20 102.4 182 40.1
arahy.Tifrunner.gnm1.ann1.52CC3C Arachis hypogaea HOM05D002352 ORTHO05D014906 1.7e-19 101.7 86 62.8
MD07G1271400 Malus domestica HOM05D002352 ORTHO05D016619 3.2e-18 97.4 78 66.7
TPR.G28591 Trifolium pratense HOM05D002352 ORTHO05D014906 1.3e-16 92.0 55 78.2
MCO15G118 Micromonas commoda HOM05D002352 ORTHO05D003724 8.6e-16 89.4 106 42.5
Cre03.g149800 Chlamydomonas reinhardtii HOM05D002352 ORTHO05D003724 1.1e-15 89.0 111 36.9
arahy.Tifrunner.gnm1.ann1.KL0F8I Arachis hypogaea HOM05D002352 ORTHO05D014906 1.5e-15 88.6 53 75.5
Hma1.2p1_1294F.1_g273870 Hydrangea macrophylla HOM05D002352 ORTHO05D015016 5.6e-15 86.7 189 38.1
Hma1.2p1_1431F.1_g282990 Hydrangea macrophylla HOM05D002352 ORTHO05D015016 2.1e-14 84.7 187 38.0
Zm00001eb083320 Zea mays HOM05D002352 ORTHO05D016619 7.5e-12 76.3 147 44.2
Lsat_1_v5_gn_1_35900 Lactuca sativa HOM05D002352 ORTHO05D015016 1.3e-11 75.5 96 44.8
AL8G20640 Arabidopsis lyrata HOM05D002352 ORTHO05D003724 2.9e-11 74.3 67 58.2
TPR.G38072 Trifolium pratense HOM05D002352 ORTHO05D014906 2.9e-11 74.3 112 40.2
HanXRQChr11g0324561 Helianthus annuus HOM05D002352 ORTHO05D015016 1.4e-10 72.0 97 46.4
Lsat_1_v5_gn_3_55481 Lactuca sativa HOM05D002352 ORTHO05D011576 3.2e-10 70.9 46 71.7
TPR.G18787 Trifolium pratense HOM05D002352 ORTHO05D014906 1.6e-09 68.6 179 29.1
Hma1.2p1_0356F.1_g134010 Hydrangea macrophylla HOM05D002352 ORTHO05D015016 6.0e-09 66.6 138 39.9
MD07G1271500 Malus domestica HOM05D002352 ORTHO05D014906 2.3e-08 64.7 32 93.8
Psat3g070400 Pisum sativum HOM05D002352 ORTHO05D015016 2.3e-08 64.7 60 55.0
CSS0036155 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D015016 3.0e-08 64.3 118 40.7
arahy.Tifrunner.gnm1.ann1.14M6HG Arachis hypogaea HOM05D002352 ORTHO05D000032 1.1e-07 62.4 46 67.4
TPR.G13263 Trifolium pratense HOM05D002352 ORTHO05D014906 1.9e-07 61.6 37 75.7
PRCOL_00006063 Prasinoderma coloniale HOM05D002352 ORTHO05D003724 5.6e-07 60.1 107 31.8
CSS0012113 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.8e-06 57.8 44 61.4
CSS0029081 Camellia sinensis var. sinensis HOM05D005037 ORTHO05D006274 2.8e-06 57.8 44 61.4
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 2.8e-06 57.8 45 57.8
MD13G1265400 Malus domestica HOM05D002352 ORTHO05D247321 2.8e-06 57.8 49 73.5
Lsat_1_v5_gn_7_13280 Lactuca sativa HOM05D002352 ORTHO05D000385 4.7e-06 57.0 34 73.5
CSS0043147 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D015016 6.2e-06 56.6 118 39.0


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