Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1269300 Malus domestica HOM05D000094 ORTHO05D030077 6.1e-99 364.4 215 100.0
Dinv34939 Davidia involucrata HOM05D000094 ORTHO05D002350 7.1e-15 85.1 51 76.5
ECA232G4620 Erigeron canadensis HOM05D000094 ORTHO05D002350 1.9e-12 77.0 46 73.9
Lsat_1_v5_gn_3_97520 Lactuca sativa HOM05D000094 ORTHO05D002350 2.5e-12 76.6 47 72.3
HPP92_000903 Vanilla planifolia HOM05D000094 ORTHO05D002350 1.3e-11 74.3 47 72.3
EL10Ac6g15008 Beta vulgaris HOM05D000094 ORTHO05D002350 6.2e-11 72.0 43 76.7
Haze_14427 Corylus avellana HOM05D000094 ORTHO05D002350 1.4e-10 70.9 48 64.6
RcHm_v2.0_Chr2g0165821 Rosa chinensis HOM05D000094 ORTHO05D002350 1.4e-10 70.9 46 69.6
Lsat_1_v5_gn_3_53840 Lactuca sativa HOM05D000094 ORTHO05D002350 5.3e-10 68.9 45 66.7
Lsat_1_v5_gn_4_171740 Lactuca sativa HOM05D000094 ORTHO05D002350 1.5e-09 67.4 37 78.4
Nitab4.5_0003583g0010 Nicotiana tabacum HOM05D000094 ORTHO05D002350 2.6e-09 66.6 51 62.7
BcaC09g47686 Brassica carinata HOM05D003455 ORTHO05D002350 5.8e-09 65.5 38 78.9
QL02p067556 Quercus lobata HOM05D000094 ORTHO05D002350 7.6e-09 65.1 51 58.8
CiPaw.04G055400 Carya illinoinensis HOM05D000094 ORTHO05D002350 9.9e-09 64.7 36 80.6
Sabra16G0100000 Salix brachista HOM05D000094 ORTHO05D030077 1.3e-08 64.3 43 72.1
BNapus_Darmor_BZH_scaffold_113p00190 Brassica napus HOM05D003455 ORTHO05D002350 1.7e-08 63.9 46 65.2
BolC1t05918H Brassica oleracea HOM05D003455 ORTHO05D002350 1.7e-08 63.9 46 65.2
BraA01t04626Z Brassica rapa HOM05D003455 ORTHO05D002350 1.7e-08 63.9 46 65.2
SGA_v2.0_scaffold52G19138 Striga asiatica HOM05D000094 ORTHO05D002350 1.7e-08 63.9 38 76.3
THA.LOC104820995 Tarenaya hassleriana HOM05D000094 ORTHO05D002350 1.7e-08 63.9 39 76.9
AL2G28360 Arabidopsis lyrata HOM05D000094 ORTHO05D002350 2.2e-08 63.5 42 69.0
HanXRQChr17g0546061 Helianthus annuus HOM05D000094 ORTHO05D002350 2.2e-08 63.5 37 78.4
Manes.02G055300 Manihot esculenta HOM05D000094 ORTHO05D002350 2.2e-08 63.5 37 81.1
PSO017G6230 Papaver somniferum HOM05D000094 ORTHO05D002350 2.2e-08 63.5 40 72.5
AT1G69270 Arabidopsis thaliana HOM05D000094 ORTHO05D002350 2.9e-08 63.2 42 69.0
Thecc.02G329900 Theobroma cacao HOM05D000094 ORTHO05D002350 2.9e-08 63.2 37 78.4
BcaC03g15065 Brassica carinata HOM05D000094 ORTHO05D002350 3.8e-08 62.8 36 72.2
C02p26220 Brassica napus HOM05D000094 ORTHO05D002350 3.8e-08 62.8 36 72.2
BolC2t08688H Brassica oleracea HOM05D000094 ORTHO05D002350 3.8e-08 62.8 36 72.2
PSO478G3855 Papaver somniferum HOM05D000094 ORTHO05D002350 4.9e-08 62.4 40 70.0
BraA02t06638Z Brassica rapa HOM05D000094 ORTHO05D002350 6.4e-08 62.0 37 70.3
Gohir.A09G009300 Gossypium hirsutum HOM05D000094 ORTHO05D002350 6.4e-08 62.0 38 76.3
Gohir.D09G008400 Gossypium hirsutum HOM05D000094 ORTHO05D002350 6.4e-08 62.0 38 76.3
Gorai.006G010100 Gossypium raimondii HOM05D000094 ORTHO05D002350 6.4e-08 62.0 38 76.3
HanXRQChr12g0375211 Helianthus annuus HOM05D000094 ORTHO05D002350 8.4e-08 61.6 40 65.0
A02p15770 Brassica napus HOM05D000094 ORTHO05D002350 1.1e-07 61.2 36 72.2
Peaxi162Scf00667g00064 Petunia axillaris HOM05D000094 ORTHO05D002350 1.4e-07 60.8 51 54.9
BcaB03g15886 Brassica carinata HOM05D000094 ORTHO05D002350 2.4e-07 60.1 40 65.0
BcaB05g24436 Brassica carinata HOM05D000094 ORTHO05D002350 3.2e-07 59.7 36 66.7
Nitab4.5_0000014g0400 Nicotiana tabacum HOM05D000094 ORTHO05D002350 4.2e-07 59.3 40 62.5
Mapoly0122s0002 Marchantia polymorpha HOM05D009562 ORTHO05D010783 5.5e-07 58.9 52 55.8
Duzib147G1339 Durio zibethinus HOM05D000094 ORTHO05D002350 1.6e-06 57.4 35 77.1
Solyc04g005390.3 Solanum lycopersicum HOM05D000094 ORTHO05D002350 1.6e-06 57.4 41 61.0
Sopen04g001380 Solanum pennellii HOM05D000094 ORTHO05D002350 2.7e-06 56.6 41 61.0
Migut.L01186 Erythranthe guttata HOM05D000094 ORTHO05D002350 4.6e-06 55.8 51 52.9
Os03g0756200 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D002350 4.6e-06 55.8 46 60.9
CARHR062140 Cardamine hirsuta HOM05D000094 ORTHO05D002350 6.0e-06 55.5 42 61.9


User provided reference genes

Program Settings