Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 3.4e-206 721.5 377 100.0
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 9.1e-183 643.7 377 86.2
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 1.7e-181 639.4 371 89.5
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.8e-178 629.4 377 84.9
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 5.9e-174 614.4 377 83.3
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 8.5e-173 610.5 389 79.7
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.3e-165 586.6 380 79.2
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.6e-163 579.7 377 79.8
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 1.8e-162 576.2 378 78.0
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.0e-162 575.5 410 73.4
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 8.8e-162 573.9 322 91.9
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 2.6e-161 572.4 379 76.3
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 1.4e-159 566.6 379 76.0
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 4.5e-158 561.6 377 74.8
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.0e-157 560.5 379 74.1
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 4.3e-156 555.1 379 75.2
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 5.6e-156 554.7 377 78.0
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 2.8e-155 552.4 380 73.7
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 6.1e-155 551.2 380 74.7
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 6.1e-155 551.2 383 72.8
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.0e-154 550.4 379 73.9
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 1.4e-154 550.1 380 73.4
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 1.4e-154 550.1 379 72.8
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 1.8e-154 549.7 399 71.9
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 3.0e-154 548.9 379 73.6
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 5.2e-154 548.1 380 73.9
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 1.2e-153 547.0 379 73.1
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.5e-153 546.6 389 74.3
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.5e-153 546.6 377 74.0
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 5.7e-153 544.7 379 73.6
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 9.8e-153 543.9 383 73.1
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 1.7e-152 543.1 379 72.8
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.7e-152 543.1 379 72.0
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.2e-152 542.7 379 73.6
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 6.4e-152 541.2 378 73.5
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.8e-151 539.7 379 71.5
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 2.4e-151 539.3 385 71.2
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 3.2e-151 538.9 380 71.6
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 4.1e-151 538.5 381 71.4
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 4.1e-151 538.5 380 72.9
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 7.0e-151 537.7 403 69.0
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 9.2e-151 537.3 379 72.0
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 2.0e-150 536.2 379 72.0
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 2.7e-150 535.8 380 73.2
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 4.6e-150 535.0 379 72.3
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 5.9e-150 534.6 380 72.4
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.0e-149 533.9 407 68.6
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 1.7e-149 533.1 409 68.0
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 1.7e-149 533.1 380 71.1
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 3.9e-149 531.9 380 72.1
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 6.6e-149 531.2 379 72.0
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 4.3e-148 528.5 379 71.5
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 4.3e-148 528.5 380 72.4
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.6e-147 526.6 377 71.4
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.6e-147 526.6 379 71.0
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 6.2e-147 524.6 380 71.3
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 8.0e-147 524.2 379 68.9
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.4e-146 523.5 379 71.2
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 1.4e-146 523.5 379 71.5
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 2.3e-146 522.7 379 70.7
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 3.1e-146 522.3 380 71.1
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 6.8e-146 521.2 383 69.2
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 8.9e-146 520.8 384 68.8
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 1.2e-145 520.4 379 70.2
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 1.2e-145 520.4 379 70.7
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 4.4e-145 518.5 375 71.2
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 1.7e-144 516.5 380 70.3
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 2.9e-144 515.8 380 70.0
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 2.9e-144 515.8 380 70.0
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 3.7e-144 515.4 377 68.2
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 3.7e-144 515.4 430 63.5
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 6.4e-144 514.6 379 68.1
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 8.3e-144 514.2 434 63.1
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 1.4e-143 513.5 432 63.4
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 1.9e-143 513.1 380 70.3
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.9e-143 513.1 379 68.3
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 7.0e-143 511.1 378 68.0
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 1.6e-142 510.0 380 67.4
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.7e-142 509.2 377 70.3
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 6.0e-142 508.1 379 66.5
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.3e-141 506.9 362 71.8
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.3e-141 506.9 377 68.2
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 6.6e-141 504.6 379 66.8
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 4.3e-140 501.9 379 67.0
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 2.8e-139 499.2 387 65.9
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 4.7e-139 498.4 403 64.0
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 6.8e-138 494.6 396 65.7
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 6.8e-138 494.6 356 71.6
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 6.8e-138 494.6 388 67.8
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 8.9e-138 494.2 381 65.9
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.6e-137 492.7 379 66.0
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 2.1e-131 473.0 380 62.6
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 8.1e-131 471.1 458 55.7
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 1.4e-130 470.3 388 63.4
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.5e-129 466.8 377 62.6
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 6.6e-125 451.4 331 67.4
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 2.5e-124 449.5 381 62.5
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 4.9e-120 435.3 382 59.7
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 1.5e-116 423.7 410 57.8
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.3e-115 420.6 279 77.4
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 6.2e-115 418.3 276 78.6
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 5.3e-114 415.2 382 58.6
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 1.5e-113 413.7 387 57.6
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 7.6e-113 411.4 382 57.3
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 3.2e-103 379.4 386 54.1
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 5.1e-77 292.4 245 62.4
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 6.7e-69 265.4 420 40.5
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 5.9e-65 252.3 158 79.7
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.5e-63 247.7 158 79.1
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.6e-62 244.2 161 77.0
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 1.8e-58 230.7 456 34.0
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 8.8e-53 211.8 350 39.4
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.5e-52 208.8 161 68.3
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.7e-48 197.6 147 70.1
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 9.5e-47 191.8 163 58.3
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 5.9e-41 172.6 129 65.9
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.1e-38 164.1 126 67.5
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.8e-29 134.4 124 57.3
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 2.6e-28 130.6 86 76.7
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 1.7e-27 127.9 102 56.9
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.0e-25 120.9 95 66.3
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 1.7e-24 117.9 103 53.4
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 9.2e-10 68.9 39 87.2
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 2.1e-09 67.8 39 84.6
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.3e-08 65.1 160 28.8
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 1.6e-06 58.2 116 35.3


User provided reference genes

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