Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 4.0e-126 454.9 250 100.0
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 1.3e-68 263.8 197 70.1
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 6.9e-62 241.5 194 64.4
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.2e-60 236.5 193 65.8
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.4e-59 233.8 195 64.6
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 3.2e-59 232.6 187 66.3
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.1e-58 229.9 195 64.6
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 1.6e-55 220.3 196 58.2
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 8.2e-55 218.0 188 58.5
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 5.3e-54 215.3 184 59.2
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 2.2e-52 209.9 159 64.2
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 8.5e-52 208.0 198 54.0
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 1.4e-51 207.2 199 56.8
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 3.2e-51 206.1 199 55.8
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 4.2e-51 205.7 191 57.1
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 5.5e-51 205.3 195 55.4
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 5.5e-51 205.3 197 52.8
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 7.2e-51 204.9 202 54.0
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 9.3e-51 204.5 199 53.8
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 1.2e-50 204.1 199 53.3
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 1.2e-50 204.1 195 54.9
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 1.6e-50 203.8 198 52.5
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 2.1e-50 203.4 199 53.3
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.7e-50 203.0 198 52.0
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 6.1e-50 201.8 202 53.0
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 7.9e-50 201.4 198 51.5
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 1.8e-49 200.3 195 55.4
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 5.1e-49 198.7 198 54.0
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 8.7e-49 198.0 194 55.2
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 1.1e-48 197.6 198 50.0
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 1.9e-48 196.8 192 54.2
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 2.5e-48 196.4 194 56.7
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 3.3e-48 196.1 198 52.0
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 4.3e-48 195.7 189 52.9
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 5.7e-48 195.3 203 51.2
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 7.4e-48 194.9 195 53.8
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 2.8e-47 193.0 194 52.6
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 4.8e-47 192.2 204 51.5
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 6.3e-47 191.8 172 57.6
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 6.3e-47 191.8 172 57.6
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 6.3e-47 191.8 194 52.1
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 2.4e-46 189.9 192 51.0
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 2.4e-46 189.9 181 51.9
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 4.1e-46 189.1 188 52.1
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 4.1e-46 189.1 194 51.0
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 1.2e-45 187.6 155 60.6
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 2.0e-45 186.8 199 49.7
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 2.6e-45 186.4 164 56.7
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 2.6e-45 186.4 199 49.2
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 3.4e-45 186.0 193 51.8
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 5.9e-45 185.3 200 50.5
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 6.5e-44 181.8 179 52.0
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 6.5e-44 181.8 186 52.7
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 2.5e-43 179.9 198 49.0
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 1.2e-42 177.6 192 50.5
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 1.6e-42 177.2 193 48.7
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 4.6e-42 175.6 196 46.4
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.0e-41 174.5 156 57.7
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 6.7e-41 171.8 193 48.2
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 2.0e-40 170.2 172 52.9
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 7.4e-40 168.3 143 57.3
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 7.4e-40 168.3 190 50.5
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 9.7e-40 167.9 214 45.8
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 1.3e-39 167.5 166 51.8
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.4e-38 164.1 137 60.6
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 3.1e-38 162.9 151 55.6
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 9.1e-38 161.4 141 60.3
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 9.1e-38 161.4 193 44.0
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 1.7e-36 157.1 175 46.9
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 1.6e-34 150.6 181 48.1
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 1.4e-33 147.5 200 43.0
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 1.8e-33 147.1 185 47.6
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 5.2e-33 145.6 200 42.5
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 2.6e-32 143.3 205 39.5
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 2.6e-32 143.3 137 54.7
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 1.7e-31 140.6 195 40.0
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 1.7e-31 140.6 196 40.8
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 1.7e-31 140.6 196 40.8
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 2.2e-31 140.2 201 39.3
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 2.8e-31 139.8 196 42.3
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 3.7e-31 139.4 209 38.8
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 8.2e-31 138.3 198 38.4
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 3.1e-30 136.3 117 59.0
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 3.1e-30 136.3 198 37.9
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 7.0e-30 135.2 205 40.0
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 1.2e-29 134.4 195 43.6
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 2.6e-29 133.3 143 50.3
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 3.5e-29 132.9 196 39.3
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 3.5e-29 132.9 149 42.3
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 3.5e-29 132.9 178 45.5
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 5.9e-29 132.1 135 49.6
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 4.2e-27 125.9 160 41.9
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 1.8e-25 120.6 199 37.7
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 7.5e-24 115.2 203 35.0
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 4.2e-19 99.4 159 33.3
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 2.1e-18 97.1 77 57.1
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 6.1e-18 95.5 148 36.5
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 3.4e-16 89.7 121 42.1
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 2.4e-14 83.6 119 39.5
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 1.2e-13 81.3 193 26.4
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 8.0e-10 68.6 179 30.2
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 1.0e-09 68.2 179 30.2


User provided reference genes

Program Settings