Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1140100 Malus domestica HOM05D005745 ORTHO05D006857 8.6e-50 199.9 93 100.0
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 1.0e-26 123.2 69 84.1
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 2.9e-21 105.1 64 78.1
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 1.1e-20 103.2 65 76.9
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 4.1e-20 101.3 65 75.4
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 7.1e-20 100.5 66 74.2
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 2.1e-19 99.0 65 73.8
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 7.8e-19 97.1 65 70.8
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 1.8e-15 85.9 62 69.4
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.2e-13 79.0 62 59.7
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 2.9e-13 78.6 61 59.0
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 2.9e-13 78.6 62 58.1
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 2.9e-13 78.6 62 58.1
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 2.4e-12 75.5 62 58.1
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 3.2e-12 75.1 62 58.1
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 4.2e-12 74.7 61 59.0
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 5.4e-12 74.3 62 54.8
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 5.4e-12 74.3 62 54.8
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 1.2e-11 73.2 62 58.1
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 1.6e-11 72.8 62 59.7
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.7e-11 72.0 62 56.5
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 2.7e-11 72.0 62 56.5
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 3.5e-11 71.6 62 54.8
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 4.6e-11 71.2 62 56.5
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 6.0e-11 70.9 65 50.8
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 3.0e-10 68.6 61 50.8
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 3.9e-10 68.2 64 53.1
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 5.1e-10 67.8 62 53.2
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 5.1e-10 67.8 62 53.2
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 8.7e-10 67.0 62 53.2
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 1.5e-09 66.2 61 52.5
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 1.5e-09 66.2 64 50.0
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 1.5e-09 66.2 61 52.5
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 1.9e-09 65.9 65 46.2
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 2.5e-09 65.5 62 50.0
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 4.3e-09 64.7 61 52.5
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 5.6e-09 64.3 64 48.4
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 9.6e-09 63.5 62 50.0
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 9.6e-09 63.5 64 50.0
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 1.6e-08 62.8 61 50.8
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 2.1e-08 62.4 61 49.2
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 3.6e-08 61.6 61 45.9
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 6.2e-08 60.8 53 50.9
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 1.1e-07 60.1 60 48.3
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 1.4e-07 59.7 62 51.6
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.4e-07 59.7 64 50.0
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.4e-07 59.7 64 50.0
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 1.4e-07 59.7 64 50.0
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 1.4e-07 59.7 61 47.5
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 1.4e-07 59.7 62 46.8
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 2.4e-07 58.9 62 46.8
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 2.4e-07 58.9 61 47.5
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 5.3e-07 57.8 61 47.5
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 9.0e-07 57.0 61 44.3
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 1.2e-06 56.6 62 46.8
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 1.2e-06 56.6 62 48.4
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 1.5e-06 56.2 61 50.8
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 2.6e-06 55.5 61 42.6
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 4.4e-06 54.7 64 48.4
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 5.8e-06 54.3 61 41.0
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 5.8e-06 54.3 61 47.5


User provided reference genes

Program Settings