Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 8.3e-102 373.6 179 100.0
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 2.8e-33 146.0 115 68.7
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 2.8e-33 146.0 115 69.6
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 5.0e-30 135.2 115 64.3
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 1.2e-28 130.6 115 60.0
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.2e-28 130.6 115 60.0
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.2e-28 130.6 115 60.0
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.6e-28 130.2 115 60.0
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 8.0e-28 127.9 115 60.0
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 7.4e-26 121.3 115 57.4
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.8e-25 118.6 109 58.7
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 1.8e-24 116.7 115 58.3
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 5.3e-24 115.2 115 55.7
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 7.0e-24 114.8 136 46.3
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 9.1e-24 114.4 136 46.3
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 1.2e-23 114.0 119 53.8
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 1.6e-23 113.6 118 55.9
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 1.6e-23 113.6 115 58.3
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 3.5e-23 112.5 115 51.3
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 4.5e-23 112.1 115 57.4
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 7.7e-23 111.3 113 54.9
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 7.7e-23 111.3 118 54.2
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.0e-22 110.9 115 52.2
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.3e-22 110.5 115 55.7
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 1.3e-22 110.5 113 54.0
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 1.7e-22 110.2 115 55.7
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 1.7e-22 110.2 115 53.9
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 2.2e-22 109.8 116 56.0
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 3.8e-22 109.0 113 55.8
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 3.8e-22 109.0 114 53.5
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 5.0e-22 108.6 113 55.8
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 5.0e-22 108.6 112 56.2
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 5.0e-22 108.6 112 56.2
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 5.0e-22 108.6 123 47.2
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 8.5e-22 107.8 123 46.3
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 8.5e-22 107.8 136 44.1
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 1.5e-21 107.1 115 54.8
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 1.9e-21 106.7 123 48.8
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 3.2e-21 105.9 135 43.7
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 3.2e-21 105.9 115 53.9
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 7.2e-21 104.8 123 44.7
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 7.2e-21 104.8 123 44.7
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 7.2e-21 104.8 123 44.7
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 7.2e-21 104.8 123 44.7
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 7.2e-21 104.8 115 47.8
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 7.2e-21 104.8 112 51.8
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 7.2e-21 104.8 113 55.8
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 9.4e-21 104.4 123 44.7
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 2.7e-20 102.8 123 43.9
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 2.7e-20 102.8 113 54.9
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 3.6e-20 102.4 111 52.3
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 3.6e-20 102.4 118 50.0
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 4.7e-20 102.1 111 52.3
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 8.0e-20 101.3 111 51.4
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 8.0e-20 101.3 115 50.4
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 8.0e-20 101.3 115 50.4
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 8.0e-20 101.3 115 50.4
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 1.4e-19 100.5 112 50.9
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 1.8e-19 100.1 121 51.2
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 1.8e-19 100.1 115 56.5
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 1.8e-19 100.1 131 43.5
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 2.3e-19 99.8 113 48.7
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 2.3e-19 99.8 111 53.2
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 1.5e-18 97.1 111 52.3
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 1.5e-18 97.1 115 50.4
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 2.6e-18 96.3 115 47.8
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 3.4e-18 95.9 115 46.1
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 7.5e-18 94.7 123 47.2
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 9.8e-18 94.4 115 52.2
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 1.7e-17 93.6 149 40.9
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 3.7e-17 92.4 111 45.9
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 3.7e-17 92.4 111 48.6
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 3.7e-17 92.4 111 51.4
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 4.8e-17 92.0 115 49.6
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 6.3e-17 91.7 154 39.6
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 6.3e-17 91.7 108 50.0
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 1.1e-16 90.9 111 47.7
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 7.0e-16 88.2 118 43.2
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 7.0e-16 88.2 112 44.6
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 1.2e-15 87.4 117 44.4
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 1.2e-15 87.4 112 43.8
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 7.7e-15 84.7 133 39.8
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 3.8e-14 82.4 113 38.9
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 5.5e-13 78.6 89 51.7
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 1.2e-12 77.4 101 44.6
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 4.7e-12 75.5 101 42.6
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 1.3e-09 67.4 99 39.4
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 1.7e-09 67.0 126 36.5
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 2.8e-09 66.2 92 46.7
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 3.7e-09 65.9 48 66.7
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 3.7e-09 65.9 115 35.7
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 4.9e-09 65.5 92 44.6
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 8.3e-09 64.7 140 35.0
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 1.1e-08 64.3 88 46.6
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 1.4e-08 63.9 88 45.5
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 4.1e-08 62.4 48 54.2
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 4.1e-08 62.4 88 45.5
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 5.4e-08 62.0 37 81.1
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 1.6e-07 60.5 94 44.7
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 3.5e-07 59.3 81 44.4
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 7.7e-07 58.2 49 55.1


User provided reference genes

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