Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1084700 Malus domestica HOM05D006849 ORTHO05D003348 1.0e-145 520.0 251 100.0
MD11G1203900 Malus domestica HOM05D007856 ORTHO05D003348 9.7e-64 247.7 125 96.8
MD14G1125700 Malus domestica HOM05D006849 ORTHO05D003348 1.2e-58 230.7 233 52.4
MD08G1229500 Malus domestica HOM05D006849 ORTHO05D003348 5.5e-51 205.3 235 47.2
MD14G1159700 Malus domestica HOM05D006849 ORTHO05D003348 8.5e-44 181.4 180 52.8
MD05G1328800 Malus domestica HOM05D007856 ORTHO05D003348 2.7e-42 176.4 84 100.0
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 8.5e-36 154.8 229 34.9
MD13G1161500 Malus domestica HOM05D007856 ORTHO05D003348 8.0e-34 148.3 218 40.8
RcHm_v2.0_Chr1g0371171 Rosa chinensis HOM05D006849 ORTHO05D003348 7.5e-32 141.7 239 32.6
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 6.3e-31 138.7 230 34.3
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 9.1e-30 134.8 231 32.5
RcHm_v2.0_Chr5g0066571 Rosa chinensis HOM05D006849 ORTHO05D003348 8.5e-28 128.3 241 30.7
FvH4_3g02850 Fragaria vesca HOM05D000096 ORTHO05D000045 2.5e-27 126.7 225 33.3
FAN01G0657 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.2e-27 125.9 225 33.8
FAN01G3000 Fragaria x ananassa HOM05D007856 ORTHO05D003348 4.2e-27 125.9 225 33.8
RcHm_v2.0_Chr3g0491361 Rosa chinensis HOM05D006849 ORTHO05D003348 5.5e-27 125.6 176 34.1
MD02G1253200 Malus domestica HOM05D037583 ORTHO05D003348 9.4e-27 124.8 108 57.4
MD02G1254000 Malus domestica HOM05D037583 ORTHO05D003348 9.4e-27 124.8 108 57.4
FvH4_6g08820 Fragaria vesca HOM05D007856 ORTHO05D003348 1.6e-26 124.0 227 33.5
FAN26G2587 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.3e-25 120.2 227 33.0
Potri.019G061550 Populus trichocarpa HOM05D006849 ORTHO05D003348 4.0e-25 119.4 231 32.9
FvH4_1g07041 Fragaria vesca HOM05D007856 ORTHO05D003348 9.8e-24 114.8 225 32.0
FAN06G0436 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.7e-23 112.8 243 26.3
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 3.7e-23 112.8 222 30.2
FAN20G3088 Fragaria x ananassa HOM05D007856 ORTHO05D003348 6.3e-23 112.1 238 31.9
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 5.4e-22 109.0 226 27.0
FvH4_5g19920 Fragaria vesca HOM05D006849 ORTHO05D003348 4.5e-21 105.9 236 28.0
FAN23G1437 Fragaria x ananassa HOM05D000005 ORTHO05D003348 7.7e-21 105.1 241 30.3
MD05G1167800 Malus domestica HOM05D006849 ORTHO05D003348 1.0e-20 104.8 181 35.9
FAN23G2888 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.3e-20 104.4 234 27.4
MD07G1020000 Malus domestica HOM05D006849 ORTHO05D003348 2.3e-20 103.6 69 60.9
FAN21G2011 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.8e-20 102.8 237 28.3
FAN14G2538 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.6e-20 102.1 241 27.4
FvH4_2g08146 Fragaria vesca HOM05D007856 ORTHO05D003348 8.6e-20 101.7 204 31.4
FAN24G0953 Fragaria x ananassa HOM05D007856 ORTHO05D003348 2.8e-18 96.7 204 29.9
FvH4_5g21501 Fragaria vesca HOM05D006849 ORTHO05D003348 6.1e-18 95.5 232 26.3
Potri.001G165480 Populus trichocarpa HOM05D018388 ORTHO05D003348 1.4e-17 94.4 185 32.4
FvH4_2g06412 Fragaria vesca HOM05D006849 ORTHO05D003348 1.8e-17 94.0 182 29.1
MD05G1093200 Malus domestica HOM05D007856 ORTHO05D003348 3.0e-17 93.2 73 61.6
FAN16G1806 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.0e-17 92.8 180 29.4
TWI60G0328 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 4.0e-17 92.8 251 27.5
TWI73G0686 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.2e-16 91.3 251 27.9
FAN15G3621 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.4e-16 89.7 177 27.1
TWI39G0063 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.4e-16 89.4 250 26.0
Potri.003G004401 Populus trichocarpa HOM05D006849 ORTHO05D003348 5.7e-16 89.0 142 37.3
RcHm_v2.0_Chr5g0035621 Rosa chinensis HOM05D006849 ORTHO05D003348 1.3e-15 87.8 143 29.4
TWI36G0416 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 2.9e-15 86.7 200 28.0
FvH4_3g10141 Fragaria vesca HOM05D007856 ORTHO05D003348 3.7e-15 86.3 146 32.2
FvH4_7g08311 Fragaria vesca HOM05D007856 ORTHO05D003348 3.7e-15 86.3 146 32.2
FvH4_7g18891 Fragaria vesca HOM05D007856 ORTHO05D003348 3.7e-15 86.3 146 32.2
RcHm_v2.0_Chr5g0053321 Rosa chinensis HOM05D006849 ORTHO05D003348 4.9e-15 85.9 159 33.3
TWI56G0628 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.4e-15 85.5 250 25.6
FAN21G0042 Fragaria x ananassa HOM05D007856 ORTHO05D003348 8.3e-15 85.1 126 38.9
RcHm_v2.0_Chr6g0262741 Rosa chinensis HOM05D006849 ORTHO05D003348 1.4e-14 84.3 143 28.7
TWI38G0982 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.4e-14 84.3 250 25.6
RcHm_v2.0_Chr1g0320331 Rosa chinensis HOM05D006849 ORTHO05D003348 1.8e-14 84.0 132 29.5
RcHm_v2.0_Chr5g0063301 Rosa chinensis HOM05D006849 ORTHO05D003348 3.2e-14 83.2 132 29.5
TWI32G0194 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.2e-13 81.3 250 25.2
FAN17G1070 Fragaria x ananassa HOM05D007856 ORTHO05D003348 1.6e-13 80.9 172 29.1
FvH4_4g22470 Fragaria vesca HOM05D006849 ORTHO05D003348 2.0e-13 80.5 185 29.2
TWI63G1000 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.7e-12 77.4 222 25.7
RcHm_v2.0_Chr2g0133331 Rosa chinensis HOM05D006849 ORTHO05D003348 3.0e-12 76.6 132 31.1
TWI31G0819 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 3.0e-12 76.6 290 23.1
FvH4_5g26612 Fragaria vesca HOM05D007856 ORTHO05D003348 3.9e-12 76.3 117 35.0
FAN14G0390 Fragaria x ananassa HOM05D006849 ORTHO05D003348 8.6e-12 75.1 89 34.8
FAN19G3137 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.1e-11 74.7 146 28.1
TWI63G0188 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.1e-11 74.7 203 27.1
RcHm_v2.0_Chr4g0413141 Rosa chinensis HOM05D006849 ORTHO05D003348 1.5e-11 74.3 110 36.4
TWI38G1001 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.5e-11 74.3 239 25.9
MD03G1164900 Malus domestica HOM05D007856 ORTHO05D003348 1.9e-11 73.9 53 62.3
TWI53G0769 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 1.9e-11 73.9 241 25.3
FvH4_2g22171 Fragaria vesca HOM05D006849 ORTHO05D003348 2.5e-11 73.6 169 30.2
RcHm_v2.0_Chr2g0174211 Rosa chinensis HOM05D006849 ORTHO05D003348 2.5e-11 73.6 206 26.2
MD17G1261900 Malus domestica HOM05D007856 ORTHO05D003348 3.3e-11 73.2 63 52.4
RcHm_v2.0_Chr7g0212031 Rosa chinensis HOM05D006849 ORTHO05D003348 5.6e-11 72.4 96 33.3
Lsat_1_v5_gn_1_127421 Lactuca sativa HOM05D052696 ORTHO05D010547 7.3e-11 72.0 162 27.2
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 9.5e-11 71.6 214 27.1
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 9.5e-11 71.6 207 24.2
RcHm_v2.0_Chr2g0122381 Rosa chinensis HOM05D006849 ORTHO05D003348 2.8e-10 70.1 134 29.1
Thecc.06G012500 Theobroma cacao HOM05D007876 ORTHO05D007430 3.6e-10 69.7 249 25.7
TWI77G0313 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.2e-10 68.9 207 23.7
FAN22G1474 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.0e-09 68.2 202 26.2
RcHm_v2.0_Chr5g0050871 Rosa chinensis HOM05D006849 ORTHO05D003348 1.0e-09 68.2 90 33.3
RcHm_v2.0_Chr7g0230621 Rosa chinensis HOM05D006849 ORTHO05D003348 1.4e-09 67.8 111 33.3
TWI53G0762 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.4e-09 67.8 233 22.7
RcHm_v2.0_Chr5g0067561 Rosa chinensis HOM05D006849 ORTHO05D003348 1.8e-09 67.4 111 33.3
MD17G1252600 Malus domestica HOM05D006849 ORTHO05D003348 2.3e-09 67.0 136 27.2
FAN16G1404 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.2e-08 64.7 128 26.6
RcHm_v2.0_Chr2g0133271 Rosa chinensis HOM05D006849 ORTHO05D003348 2.0e-08 63.9 109 31.2
PSO832G3413 Papaver somniferum HOM05D002907 ORTHO05D013727 2.6e-08 63.5 213 27.7
FAN08G3534 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.4e-08 63.2 132 32.6
Potri.001G320601 Populus trichocarpa HOM05D018388 ORTHO05D003348 7.5e-08 62.0 179 26.3
FAN09G1384 Fragaria x ananassa HOM05D000053 ORTHO05D000448 9.8e-08 61.6 172 32.0
FAN07G1000 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.3e-07 61.2 135 30.4
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 1.3e-07 61.2 223 22.9
MD04G1002000 Malus domestica HOM05D029265 ORTHO05D003348 1.7e-07 60.8 69 44.9
TWI53G1742 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 2.9e-07 60.1 202 23.8
FAN16G3654 Fragaria x ananassa HOM05D007856 ORTHO05D003348 3.7e-07 59.7 77 42.9
MD14G1159800 Malus domestica HOM05D007856 ORTHO05D003348 3.7e-07 59.7 38 71.1
BcaC01g00622 Brassica carinata HOM05D000305 ORTHO05D000065 1.4e-06 57.8 223 23.8
BcaC05g28034 Brassica carinata HOM05D000305 ORTHO05D000065 1.9e-06 57.4 195 24.6
TPR.G2021 Trifolium pratense HOM05D000824 ORTHO05D003555 3.2e-06 56.6 226 23.5
Ca_21770_v3 Cicer arietinum L. HOM05D000824 ORTHO05D003555 4.1e-06 56.2 227 22.5
FAN24G3491 Fragaria x ananassa HOM05D006849 ORTHO05D003348 5.4e-06 55.8 77 29.9
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 5.4e-06 55.8 144 27.1
FAN04G0160 Fragaria x ananassa HOM05D006849 ORTHO05D003348 9.2e-06 55.1 111 27.9
FAN10G4353 Fragaria x ananassa HOM05D006849 ORTHO05D003348 9.2e-06 55.1 127 27.6


User provided reference genes

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