Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1055400 Malus domestica HOM05D003771 ORTHO05D004396 1.2e-14 82.0 42 100.0
Ca_17443_v3 Cicer arietinum L. HOM05D003771 ORTHO05D004396 2.6e-14 80.9 41 97.6
Glyma.05G220300 Glycine max HOM05D003771 ORTHO05D004396 2.6e-14 80.9 41 97.6
Glyma.08G026700 Glycine max HOM05D003771 ORTHO05D004396 2.6e-14 80.9 41 97.6
Lj4g0002190 Lotus japonicus HOM05D003771 ORTHO05D004396 2.6e-14 80.9 41 97.6
Psat7g020760 Pisum sativum HOM05D003771 ORTHO05D004396 2.6e-14 80.9 41 97.6
Potri.018G149400 Populus trichocarpa HOM05D003771 ORTHO05D004396 2.6e-14 80.9 41 97.6
Prupe.7G042600 Prunus persica HOM05D003771 ORTHO05D004396 2.6e-14 80.9 41 97.6
TPR.G25458 Trifolium pratense HOM05D003771 ORTHO05D004396 2.6e-14 80.9 41 97.6
FvH4_4g00210 Fragaria vesca HOM05D003771 ORTHO05D004396 3.4e-14 80.5 41 97.6
FAN12G2055 Fragaria x ananassa HOM05D003771 ORTHO05D004396 3.4e-14 80.5 41 97.6
FAN22G1465 Fragaria x ananassa HOM05D003771 ORTHO05D004396 3.4e-14 80.5 41 97.6
GSVIVG01022289001 Vitis vinifera HOM05D003771 ORTHO05D004396 3.4e-14 80.5 41 95.1
CANSAT64G2070 Cannabis sativa HOM05D003771 ORTHO05D004396 4.5e-14 80.1 41 95.1
COL.COLO4_37655 Corchorus olitorius HOM05D003771 ORTHO05D004396 4.5e-14 80.1 41 97.6
MD15G1427900 Malus domestica HOM05D003771 ORTHO05D004396 4.5e-14 80.1 41 97.6
Phvul.002G302000 Phaseolus vulgaris HOM05D003771 ORTHO05D004396 4.5e-14 80.1 41 97.6
arahy.Tifrunner.gnm1.ann1.TH49EC Arachis hypogaea HOM05D003771 ORTHO05D004396 5.8e-14 79.7 41 95.1
arahy.Tifrunner.gnm1.ann1.XKPK2Z Arachis hypogaea HOM05D003771 ORTHO05D004396 5.8e-14 79.7 41 95.1
EL10Ac4g08749 Beta vulgaris HOM05D003771 ORTHO05D004396 5.8e-14 79.7 41 97.6
AUR62014286 Chenopodium quinoa HOM05D003771 ORTHO05D004396 5.8e-14 79.7 41 97.6
AUR62034148 Chenopodium quinoa HOM05D003771 ORTHO05D004396 5.8e-14 79.7 41 97.6
Medtr8g100105 Medicago truncatula HOM05D003771 ORTHO05D004396 5.8e-14 79.7 41 95.1
RcHm_v2.0_Chr4g0384941 Rosa chinensis HOM05D003771 ORTHO05D004396 5.8e-14 79.7 41 95.1
Sc06g0002410 Simmondsia chinensis HOM05D003771 ORTHO05D004396 7.6e-14 79.3 41 95.1
TWI34G0561 Tripterygium wilfordii HOM05D003771 ORTHO05D004396 7.6e-14 79.3 41 95.1
FAN17G2138 Fragaria x ananassa HOM05D003771 ORTHO05D004396 9.9e-14 79.0 41 95.1
SGA_v2.0_scaffold21G09599 Striga asiatica HOM05D003771 ORTHO05D004396 9.9e-14 79.0 41 92.7
VMungo0251G3699 Vigna mungo HOM05D003771 ORTHO05D004396 9.9e-14 79.0 41 95.1
Ah.04g162600 Amaranthus hybridus HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 95.1
Aqoxy3G02691 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 95.1
Aqoxy3G04250 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 95.1
CiPaw.15G162500 Carya illinoinensis HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 95.1
DCAR_020453 Daucus carota HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 95.1
Eucgr.E04317 Eucalyptus grandis HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 95.1
Lj5A798G49 Lonicera japonica HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 90.2
MD04G1002300 Malus domestica HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 95.1
Sabra18G0126200 Salix brachista HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 95.1
Hund03218 Selenicereus undatus HOM05D003771 ORTHO05D004396 1.3e-13 78.6 41 95.1
CSS0004980 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.7e-13 78.2 41 92.7
CSS0043776 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.7e-13 78.2 41 92.7
Dinv12623 Davidia involucrata HOM05D003771 ORTHO05D004396 1.7e-13 78.2 41 92.7
HanXRQChr02g0040541 Helianthus annuus HOM05D003771 ORTHO05D004396 1.7e-13 78.2 41 92.7
Lalb_Chr05g0223831 Lupinus albus HOM05D003771 ORTHO05D004396 1.7e-13 78.2 41 95.1
TAR383G0820 Trochodendron aralioides HOM05D003771 ORTHO05D004396 1.7e-13 78.2 41 92.7
Duzib168G1435 Durio zibethinus HOM05D003771 ORTHO05D004396 2.2e-13 77.8 41 95.1
Gohir.A05G000200 Gossypium hirsutum HOM05D003771 ORTHO05D004396 2.2e-13 77.8 41 95.1
Gohir.D05G000400 Gossypium hirsutum HOM05D003771 ORTHO05D004396 2.2e-13 77.8 41 95.1
Gorai.009G000200 Gossypium raimondii HOM05D003771 ORTHO05D004396 2.2e-13 77.8 41 95.1
Lsat_1_v5_gn_8_69981 Lactuca sativa HOM05D003771 ORTHO05D004396 2.2e-13 77.8 41 92.7
PSO063G0153 Papaver somniferum HOM05D003771 ORTHO05D004396 2.2e-13 77.8 39 97.4
Thecc.09G205400 Theobroma cacao HOM05D003771 ORTHO05D004396 2.2e-13 77.8 41 95.1
ATR0626G390 Amborella trichopoda HOM05D003771 ORTHO05D004396 2.9e-13 77.4 41 92.7
AL3G44140 Arabidopsis lyrata HOM05D003771 ORTHO05D004396 2.9e-13 77.4 41 90.2
AT2G07360 Arabidopsis thaliana HOM05D003771 ORTHO05D004396 2.9e-13 77.4 41 90.2
Carub.0013s0005 Capsella rubella HOM05D003771 ORTHO05D004396 2.9e-13 77.4 41 90.2
QL11p007303 Quercus lobata HOM05D003771 ORTHO05D004396 2.9e-13 77.4 41 92.7
Sp6g13880 Schrenkiella parvula HOM05D003771 ORTHO05D004396 2.9e-13 77.4 41 92.7
Actinidia02465 Actinidia chinensis HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 90.2
BcaB01g04159 Brassica carinata HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 90.2
BcaC01g06134 Brassica carinata HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 90.2
A03p16060 Brassica napus HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 90.2
C03p18900 Brassica napus HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 90.2
BolC3t14282H Brassica oleracea HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 90.2
BraA03t10897Z Brassica rapa HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 90.2
CARHR104050 Cardamine hirsuta HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 90.2
Haze_19080 Corylus avellana HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 92.7
SalBow5G2520 Salvia bowleyana HOM05D003771 ORTHO05D004396 3.8e-13 77.0 39 94.9
SEGI_40037 Sequoiadendron giganteum HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 92.7
THA.LOC104808936 Tarenaya hassleriana HOM05D003771 ORTHO05D004396 3.8e-13 77.0 41 90.2
Aa31sc328G10 Aethionema arabicum HOM05D003771 ORTHO05D004396 4.9e-13 76.6 41 90.2
CDE07G1201 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 4.9e-13 76.6 40 95.0
Thhalv10012482m.g Eutrema salsugineum HOM05D003771 ORTHO05D004396 4.9e-13 76.6 41 90.2
BcaC04g20648 Brassica carinata HOM05D003771 ORTHO05D004396 6.4e-13 76.3 41 90.2
A10p09550 Brassica napus HOM05D003771 ORTHO05D004396 6.4e-13 76.3 41 90.2
C09p41070 Brassica napus HOM05D003771 ORTHO05D004396 6.4e-13 76.3 41 90.2
ClCG04G000570 Citrullus lanatus HOM05D003771 ORTHO05D004396 6.4e-13 76.3 41 92.7
MELO3C009070.2 Cucumis melo HOM05D003771 ORTHO05D004396 6.4e-13 76.3 41 92.7
CsaV3_4G031470 Cucumis sativus L. HOM05D003771 ORTHO05D004396 6.4e-13 76.3 41 92.7
HanXRQChr05g0138111 Helianthus annuus HOM05D003771 ORTHO05D004396 6.4e-13 76.3 41 90.2
Sed0018603 Sechium edule HOM05D003771 ORTHO05D004396 6.4e-13 76.3 41 92.7
MSTRG.26513 Avicennia marina HOM05D003771 ORTHO05D004396 8.4e-13 75.9 39 92.3
Migut.L01925 Erythranthe guttata HOM05D003771 ORTHO05D004396 8.4e-13 75.9 39 92.3
Lsat_1_v5_gn_1_6680 Lactuca sativa HOM05D003771 ORTHO05D004396 8.4e-13 75.9 41 90.2
Nn1g00173 Nelumbo nucifera HOM05D003771 ORTHO05D004396 8.4e-13 75.9 41 90.2
Nn3g19428 Nelumbo nucifera HOM05D003771 ORTHO05D004396 8.4e-13 75.9 41 92.7
PGR044G2258 Punica granatum HOM05D003771 ORTHO05D004396 8.4e-13 75.9 41 90.2
Lju50C19G3 Lonicera japonica HOM05D003771 ORTHO05D004396 1.1e-12 75.5 41 87.8
Manes.02G223900 Manihot esculenta HOM05D003771 ORTHO05D004396 1.1e-12 75.5 41 92.7
Nitab4.5_0000019g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 1.1e-12 75.5 41 90.2
Peaxi162Scf00322g01517 Petunia axillaris HOM05D003771 ORTHO05D004396 1.1e-12 75.5 41 90.2
Sopen05g020060 Solanum pennellii HOM05D003771 ORTHO05D004396 1.1e-12 75.5 41 90.2
unitig_899.g15422 Utricularia gibba HOM05D003771 ORTHO05D004396 1.1e-12 75.5 40 90.0
Zm00001eb011800 Zea mays HOM05D003771 ORTHO05D004396 1.1e-12 75.5 41 90.2
Atru.chr12.1314 Acer truncatum HOM05D003771 ORTHO05D004396 1.4e-12 75.1 41 92.7
BcaB08g35516 Brassica carinata HOM05D003771 ORTHO05D004396 1.4e-12 75.1 41 87.8
Ciclev10007279m.g Citrus clementina HOM05D003771 ORTHO05D004396 1.4e-12 75.1 41 92.7
Cc06_g23760 Coffea canephora HOM05D003771 ORTHO05D004396 1.4e-12 75.1 41 90.2
PSO782G3876 Papaver somniferum HOM05D003771 ORTHO05D004396 1.4e-12 75.1 39 94.9
RcHm_v2.0_Chr4g0384821 Rosa chinensis HOM05D003771 ORTHO05D004396 1.4e-12 75.1 41 90.2
Hund19352 Selenicereus undatus HOM05D003771 ORTHO05D004396 1.4e-12 75.1 41 90.2
HPP92_018040 Vanilla planifolia HOM05D003771 ORTHO05D004396 1.4e-12 75.1 41 92.7
ECA233G1083 Erigeron canadensis HOM05D003771 ORTHO05D004396 1.9e-12 74.7 41 87.8
Oeu008632.1 Olea europaea HOM05D003771 ORTHO05D004396 1.9e-12 74.7 38 94.7
Nitab4.5_0006114g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 2.5e-12 74.3 39 92.3
CAN.G587.52 Capsicum annuum HOM05D003771 ORTHO05D004396 3.2e-12 73.9 41 85.4
Os03g0265700 Oryza sativa ssp. japonica HOM05D003771 ORTHO05D004396 7.1e-12 72.8 41 87.8
Cpa.g.sc91.64 Carica papaya HOM05D003771 ORTHO05D004396 9.3e-12 72.4 41 82.9
Psat0s1568g0040 Pisum sativum HOM05D003771 ORTHO05D004396 9.3e-12 72.4 40 87.5
Rhsim01G0106700 Rhododendron simsii HOM05D003771 ORTHO05D004396 2.7e-11 70.9 36 94.4
vmacro20748 Vaccinium macrocarpon HOM05D003771 ORTHO05D004396 2.7e-11 70.9 36 94.4
Mapoly0015s0202 Marchantia polymorpha HOM05D003771 ORTHO05D004396 1.9e-09 64.7 40 75.0
AagrBONN_evm.TU.Sc2ySwM_228.2998 Anthoceros agrestis HOM05D003771 ORTHO05D004396 1.3e-08 62.0 34 85.3
AagrBONN_evm.TU.Sc2ySwM_228.3008 Anthoceros agrestis HOM05D003771 ORTHO05D004396 1.3e-08 62.0 34 85.3
AagrBONN_evm.TU.Sc2ySwM_369.331 Anthoceros agrestis HOM05D003771 ORTHO05D004396 1.3e-08 62.0 34 85.3
SMO367G0435 Selaginella moellendorffii HOM05D003771 ORTHO05D004396 4.8e-08 60.1 35 80.0
Pp3c15_18470 Physcomitrium patens HOM05D003771 ORTHO05D004396 4.0e-07 57.0 28 92.9


User provided reference genes

Program Settings