Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 6.5e-134 480.7 239 100.0
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 1.2e-66 257.3 245 59.6
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 7.8e-63 244.6 245 57.1
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 7.3e-53 211.5 236 57.2
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 1.6e-39 167.2 246 49.2
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.0e-38 164.5 262 44.7
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 2.5e-37 159.8 248 44.0
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 3.6e-36 156.0 264 44.3
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 1.2e-34 151.0 269 41.3
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 2.6e-34 149.8 270 40.7
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 4.5e-34 149.1 263 42.2
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 4.9e-33 145.6 265 41.1
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 4.2e-32 142.5 264 39.8
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 7.1e-32 141.7 264 39.4
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 1.0e-30 137.9 249 39.0
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 1.3e-30 137.5 265 39.6
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 2.3e-30 136.7 254 39.0
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.9e-29 133.7 254 39.4
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.9e-29 133.7 260 41.2
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 2.5e-29 133.3 236 42.8
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 3.3e-29 132.9 279 38.7
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 4.3e-29 132.5 246 42.7
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 9.6e-29 131.3 248 43.1
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 3.7e-28 129.4 313 36.1
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.7e-28 129.4 258 39.5
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 8.1e-28 128.3 246 38.2
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 5.3e-27 125.6 255 34.9
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 6.9e-27 125.2 267 39.0
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 6.9e-27 125.2 246 37.8
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 6.9e-27 125.2 256 41.4
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.5e-26 124.0 266 37.2
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 2.0e-26 123.6 272 37.9
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.6e-26 123.2 259 35.5
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 4.5e-26 122.5 247 38.9
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 5.8e-26 122.1 247 38.5
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 7.6e-26 121.7 265 39.2
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 9.9e-26 121.3 247 37.7
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 9.9e-26 121.3 267 39.3
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 1.3e-25 120.9 247 38.9
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 2.2e-25 120.2 246 37.8
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.2e-25 120.2 267 39.0
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 2.9e-25 119.8 247 38.9
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 4.9e-25 119.0 245 38.8
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 4.9e-25 119.0 247 38.5
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.2e-24 116.3 247 38.5
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 3.2e-24 116.3 260 35.4
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.2e-24 115.9 258 38.4
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 1.6e-23 114.0 279 35.1
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.7e-23 113.2 264 39.0
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.7e-23 113.2 261 34.1
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 6.0e-23 112.1 246 38.2
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.3e-22 110.9 261 34.1
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 1.9e-21 107.1 270 35.2
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 4.3e-21 105.9 248 35.1
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 6.2e-20 102.1 267 32.6
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 8.2e-20 101.7 266 34.2
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 3.1e-19 99.8 265 34.0
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 5.3e-19 99.0 275 32.7
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 6.9e-19 98.6 244 33.2
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 1.2e-18 97.8 245 35.1
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.5e-18 95.9 166 36.7
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 4.5e-18 95.9 223 35.4
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 5.8e-18 95.5 264 32.6
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 5.8e-18 95.5 204 38.2
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 7.6e-18 95.1 245 34.7
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 7.6e-18 95.1 279 33.7
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 7.6e-18 95.1 257 33.5
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.3e-17 94.4 249 32.9
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 1.7e-17 94.0 261 33.3
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 6.5e-17 92.0 200 35.5
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 6.5e-17 92.0 251 33.9
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 6.5e-17 92.0 265 32.8
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 8.4e-17 91.7 246 34.1
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.1e-16 91.3 251 32.7
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.1e-16 91.3 248 32.7
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.9e-16 90.5 258 31.8
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 3.2e-16 89.7 210 37.1
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 3.2e-16 89.7 245 32.2
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 3.2e-16 89.7 245 32.2
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 5.5e-16 89.0 243 31.3
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 7.1e-16 88.6 165 40.6
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 7.1e-16 88.6 245 33.5
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 9.3e-16 88.2 226 34.5
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 2.1e-15 87.0 259 32.4
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 4.6e-15 85.9 257 32.7
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 1.0e-14 84.7 166 37.3
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.3e-14 84.3 249 32.1
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 2.3e-14 83.6 206 34.0
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 6.7e-14 82.0 230 33.0
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 6.7e-14 82.0 237 34.2
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 8.7e-14 81.6 221 32.1
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 4.3e-13 79.3 299 30.1
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 5.7e-13 79.0 166 35.5
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 4.8e-12 75.9 157 39.5
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 4.8e-12 75.9 262 32.1
FvH4_6g24000 Fragaria vesca HOM05D006494 ORTHO05D007787 6.3e-12 75.5 247 32.8
FAN14G4923 Fragaria x ananassa HOM05D006494 ORTHO05D007787 8.2e-12 75.1 248 33.1
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 1.4e-11 74.3 214 32.7
FAN05G2781 Fragaria x ananassa HOM05D000001 ORTHO05D009295 1.4e-11 74.3 249 33.3
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 1.8e-11 73.9 152 35.5
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.8e-11 73.9 229 31.0
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 3.1e-11 73.2 206 34.0
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 9.0e-11 71.6 192 35.4
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 5.9e-10 68.9 221 29.0
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 2.9e-09 66.6 256 30.1
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 3.8e-09 66.2 200 33.5
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 7.2e-08 62.0 202 32.7
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 9.4e-08 61.6 177 35.0
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 2.1e-07 60.5 193 32.1
Hund04846 Selenicereus undatus HOM05D014004 ORTHO05D015823 4.6e-07 59.3 224 31.7
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 6.1e-07 58.9 128 35.9
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 6.1e-07 58.9 288 27.1
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 8.8e-06 55.1 108 37.0


User provided reference genes

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