Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 3.0e-92 342.0 200 100.0
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 2.9e-39 166.0 174 62.6
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 2.5e-30 136.3 196 52.0
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.8e-29 132.9 194 50.0
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 5.2e-28 128.6 194 49.0
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.0e-27 126.7 187 50.3
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 3.4e-27 125.9 194 48.5
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 1.3e-26 124.0 122 63.9
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 9.2e-25 117.9 124 62.1
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 3.5e-24 115.9 110 61.8
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 1.0e-23 114.4 184 46.7
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 1.7e-23 113.6 112 58.9
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 2.3e-23 113.2 123 62.6
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.1e-22 110.9 191 42.9
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 1.9e-22 110.2 194 44.8
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 4.3e-22 109.0 194 43.3
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 1.2e-21 107.5 190 44.7
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 1.6e-21 107.1 183 47.5
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 2.8e-21 106.3 190 43.7
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 4.7e-21 105.5 123 58.5
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 6.2e-21 105.1 112 59.8
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 3.1e-20 102.8 189 46.6
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 4.0e-20 102.4 183 43.7
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 6.8e-20 101.7 122 54.1
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 6.8e-20 101.7 189 41.3
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 8.9e-20 101.3 122 54.1
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 8.9e-20 101.3 115 56.5
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.5e-19 100.5 112 52.7
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 1.5e-19 100.5 112 52.7
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 2.0e-19 100.1 181 42.5
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 2.6e-19 99.8 114 53.5
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 3.4e-19 99.4 110 56.4
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 5.8e-19 98.6 113 51.3
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 7.5e-19 98.2 111 55.9
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.7e-18 97.1 193 40.9
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 3.7e-18 95.9 181 42.5
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 4.9e-18 95.5 181 41.4
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 6.4e-18 95.1 105 58.1
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 6.4e-18 95.1 135 48.1
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 8.3e-18 94.7 142 43.7
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 1.1e-17 94.4 113 56.6
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.4e-17 94.0 122 52.5
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 1.9e-17 93.6 186 40.3
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 2.4e-17 93.2 181 42.0
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 2.4e-17 93.2 120 51.7
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 4.1e-17 92.4 182 40.1
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 7.1e-17 91.7 134 48.5
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 7.1e-17 91.7 183 43.2
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 7.1e-17 91.7 141 45.4
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 1.2e-16 90.9 111 51.4
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 2.1e-16 90.1 115 55.7
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 3.5e-16 89.4 145 44.8
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 4.6e-16 89.0 125 47.2
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 4.6e-16 89.0 182 41.2
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 6.0e-16 88.6 104 56.7
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.3e-15 87.4 192 36.5
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.7e-15 87.0 184 40.8
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 3.0e-15 86.3 105 55.2
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 3.9e-15 85.9 143 44.8
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 5.1e-15 85.5 113 47.8
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 8.6e-15 84.7 186 39.8
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.9e-14 83.6 112 48.2
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.9e-14 83.6 121 47.1
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 2.5e-14 83.2 112 48.2
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 2.5e-14 83.2 186 36.0
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 3.3e-14 82.8 122 48.4
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 9.5e-14 81.3 122 47.5
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 9.5e-14 81.3 118 44.9
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.6e-13 80.5 112 47.3
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.6e-13 80.5 144 41.7
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 2.1e-13 80.1 144 41.7
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 2.8e-13 79.7 112 50.0
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 3.6e-13 79.3 126 46.0
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 3.6e-13 79.3 112 48.2
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 8.1e-13 78.2 116 45.7
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 1.8e-12 77.0 112 47.3
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 4.0e-12 75.9 112 47.3
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 4.0e-12 75.9 158 41.8
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 4.0e-12 75.9 140 45.0
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 5.2e-12 75.5 128 46.1
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 6.8e-12 75.1 112 47.3
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 1.5e-11 73.9 135 45.2
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 2.0e-11 73.6 122 43.4
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 2.6e-11 73.2 165 38.8
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 3.4e-11 72.8 120 45.0
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 4.9e-10 68.9 116 42.2
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 1.1e-09 67.8 121 38.0
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.1e-09 67.8 116 41.4
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 9.2e-09 64.7 123 36.6
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 2.1e-08 63.5 112 39.3
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 4.6e-08 62.4 116 39.7
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 7.8e-08 61.6 137 36.5
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 7.8e-08 61.6 153 36.6
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 7.8e-08 61.6 175 32.6
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 5.1e-07 58.9 42 64.3
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 8.7e-07 58.2 136 39.0


User provided reference genes

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