Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 1.4e-57 226.1 115 100.0
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 1.6e-42 176.0 108 85.2
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 6.2e-42 174.1 115 80.9
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 6.2e-34 147.5 108 71.3
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 1.8e-33 146.0 108 74.1
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 2.0e-32 142.5 105 67.6
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 2.0e-32 142.5 105 67.6
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 2.2e-31 139.0 106 63.2
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 2.9e-31 138.7 105 68.6
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 3.8e-31 138.3 107 66.4
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 8.4e-31 137.1 107 65.4
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 8.4e-31 137.1 104 68.3
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 8.4e-31 137.1 104 68.3
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 8.4e-31 137.1 109 63.3
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 1.9e-30 136.0 103 67.0
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 1.9e-30 136.0 107 61.7
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 3.2e-30 135.2 107 63.6
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 5.5e-30 134.4 107 64.5
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 7.1e-30 134.0 104 67.3
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 9.3e-30 133.7 107 63.6
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 9.3e-30 133.7 107 61.7
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 1.2e-29 133.3 107 63.6
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 1.2e-29 133.3 107 63.6
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 1.2e-29 133.3 107 63.6
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 1.2e-29 133.3 107 63.6
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 1.2e-29 133.3 107 63.6
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 1.2e-29 133.3 103 65.0
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 1.2e-29 133.3 109 65.1
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 1.6e-29 132.9 106 63.2
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 2.7e-29 132.1 106 62.3
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 3.5e-29 131.7 107 64.5
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 4.6e-29 131.3 108 62.0
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 6.0e-29 131.0 107 62.6
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 7.9e-29 130.6 107 62.6
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 7.9e-29 130.6 107 63.6
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 1.3e-28 129.8 103 67.0
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 1.3e-28 129.8 107 64.5
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 1.8e-28 129.4 104 64.4
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 3.0e-28 128.6 107 59.8
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 3.9e-28 128.3 108 60.2
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 3.9e-28 128.3 107 57.9
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 6.7e-28 127.5 106 60.4
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 8.7e-28 127.1 111 62.2
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 1.5e-27 126.3 107 58.9
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 1.9e-27 125.9 103 63.1
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 5.7e-27 124.4 104 58.7
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 9.6e-27 123.6 103 58.3
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 1.3e-26 123.2 107 56.1
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 4.8e-26 121.3 110 59.1
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 1.8e-25 119.4 92 65.2
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 1.8e-25 119.4 107 56.1
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 5.3e-25 117.9 110 55.5
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 9.0e-25 117.1 110 55.5
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 1.2e-24 116.7 96 62.5
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 1.5e-24 116.3 105 60.0
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 2.0e-24 115.9 105 55.2
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 2.0e-24 115.9 103 55.3
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 3.4e-24 115.2 110 54.5
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 3.4e-24 115.2 108 53.7
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 4.5e-24 114.8 103 56.3
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 7.6e-24 114.0 103 56.3
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 7.6e-24 114.0 110 52.7
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 7.6e-24 114.0 110 52.7
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 1.0e-23 113.6 105 60.0
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 1.7e-23 112.8 101 59.4
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 1.7e-23 112.8 109 58.7
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 1.7e-23 112.8 108 51.9
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 2.2e-23 112.5 107 52.3
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 2.2e-23 112.5 107 50.5
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 6.5e-23 110.9 107 57.9
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 1.9e-22 109.4 103 51.5
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 3.2e-22 108.6 103 50.5
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 5.5e-22 107.8 77 72.7
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 5.5e-22 107.8 91 60.4
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 9.3e-22 107.1 104 53.8
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 2.7e-21 105.5 107 47.7
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 6.1e-21 104.4 77 68.8
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 7.9e-21 104.0 103 52.4
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 1.0e-20 103.6 111 57.7
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 1.9e-19 99.4 106 50.0
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 1.8e-17 92.8 88 56.8
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 6.9e-17 90.9 103 41.7
MD08G1180100 Malus domestica HOM05D007749 ORTHO05D009809 6.9e-17 90.9 57 87.7
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 1.5e-16 89.7 105 49.5
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 1.4e-14 83.2 77 57.1
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 1.9e-14 82.8 77 53.2
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 1.9e-14 82.8 77 53.2
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 4.3e-11 71.6 108 41.7
SEGI_37948 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 2.4e-09 65.9 103 35.0
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 3.4e-08 62.0 104 40.4
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 1.3e-07 60.1 105 41.9
SEGI_10158 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 2.2e-07 59.3 81 38.3
vmacro02359 Vaccinium macrocarpon HOM05D007749 ORTHO05D009809 3.8e-07 58.5 47 57.4


User provided reference genes

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