Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1188300 Malus domestica HOM05D000635 ORTHO05D000488 1.3e-45 186.0 95 100.0
MD14G1194800 Malus domestica HOM05D000635 ORTHO05D000488 7.5e-25 117.1 83 75.9
Prupe.5G186500 Prunus persica HOM05D000635 ORTHO05D000488 5.0e-21 104.4 92 62.0
RcHm_v2.0_Chr7g0180611 Rosa chinensis HOM05D000635 ORTHO05D000488 1.7e-16 89.4 84 54.8
FAN08G1275 Fragaria x ananassa HOM05D000635 ORTHO05D000488 2.8e-16 88.6 91 52.7
FAN04G2177 Fragaria x ananassa HOM05D000635 ORTHO05D000488 4.8e-16 87.8 91 52.7
FvH4_5g15480 Fragaria vesca HOM05D000635 ORTHO05D000488 6.3e-16 87.4 84 53.6
FAN18G0988 Fragaria x ananassa HOM05D000635 ORTHO05D000488 6.3e-16 87.4 84 53.6
CiPaw.11G038300 Carya illinoinensis HOM05D000635 ORTHO05D000488 1.6e-14 82.8 84 54.8
Haze_07378 Corylus avellana HOM05D000635 ORTHO05D000488 3.5e-14 81.6 84 53.6
FAN13G1852 Fragaria x ananassa HOM05D000635 ORTHO05D000488 7.7e-14 80.5 86 52.3
QL10p015607 Quercus lobata HOM05D000635 ORTHO05D000488 1.0e-13 80.1 84 51.2
Thecc.03G079300 Theobroma cacao HOM05D000635 ORTHO05D000488 8.6e-13 77.0 84 50.0
Cfa018989 Carpinus fangiana HOM05D000635 ORTHO05D000488 1.1e-12 76.6 85 51.8
PGR083G0440 Punica granatum HOM05D000635 ORTHO05D000488 2.5e-12 75.5 84 46.4
Lj4g0008003 Lotus japonicus HOM05D000635 ORTHO05D000488 2.1e-11 72.4 84 47.6
arahy.Tifrunner.gnm1.ann1.CNIN65 Arachis hypogaea HOM05D000635 ORTHO05D000488 1.0e-10 70.1 83 47.0
arahy.Tifrunner.gnm1.ann1.E7ZXJI Arachis hypogaea HOM05D000635 ORTHO05D000488 1.0e-10 70.1 83 47.0
Duzib205G0126 Durio zibethinus HOM05D000635 ORTHO05D000488 3.0e-10 68.6 84 45.2
Eucgr.B00430 Eucalyptus grandis HOM05D000635 ORTHO05D000488 3.0e-10 68.6 84 46.4
Psat4g053560 Pisum sativum HOM05D000635 ORTHO05D000488 6.8e-10 67.4 84 44.0
TPR.G38448 Trifolium pratense HOM05D000635 ORTHO05D000488 6.8e-10 67.4 84 42.9
Cpa.g.sc17.212 Carica papaya HOM05D000635 ORTHO05D000488 1.5e-09 66.2 84 44.0
Gohir.A12G175280 Gossypium hirsutum HOM05D000635 ORTHO05D000488 1.5e-09 66.2 78 46.2
Gohir.D12G178276 Gossypium hirsutum HOM05D000635 ORTHO05D000488 1.5e-09 66.2 78 46.2
Gorai.008G190600 Gossypium raimondii HOM05D000635 ORTHO05D000488 1.5e-09 66.2 78 46.2
Manes.14G074800 Manihot esculenta HOM05D000635 ORTHO05D000488 1.5e-09 66.2 95 42.1
TWI81G0049 Tripterygium wilfordii HOM05D000635 ORTHO05D000488 3.4e-09 65.1 84 44.0
Ca_21847_v3 Cicer arietinum L. HOM05D000635 ORTHO05D000488 5.7e-09 64.3 84 42.9
Potri.012G070300 Populus trichocarpa HOM05D000635 ORTHO05D000488 1.7e-08 62.8 58 58.6
MBI11_g15186_MAGBIO Magnolia biondii HOM05D000635 ORTHO05D000488 8.3e-08 60.5 84 45.2
MBI11_g45853_MAGBIO Magnolia biondii HOM05D000635 ORTHO05D000488 8.3e-08 60.5 84 45.2
Sabra12G0050100 Salix brachista HOM05D000635 ORTHO05D000488 2.4e-07 58.9 58 55.2
THA.LOC104822371 Tarenaya hassleriana HOM05D000635 ORTHO05D000488 4.1e-07 58.2 79 40.5
QL03p065609 Quercus lobata HOM05D000635 ORTHO05D000488 5.4e-07 57.8 84 40.5
Medtr4g107840 Medicago truncatula HOM05D000635 ORTHO05D000488 7.0e-07 57.4 84 39.3
Sabra08G0148100 Salix brachista HOM05D000635 ORTHO05D000488 7.0e-07 57.4 84 39.3
TAR374G0255 Trochodendron aralioides HOM05D000635 ORTHO05D000488 7.0e-07 57.4 84 42.9
Potri.008G194900 Populus trichocarpa HOM05D000635 ORTHO05D000488 9.2e-07 57.0 84 38.1
vmacro05733 Vaccinium macrocarpon HOM05D000635 ORTHO05D000488 9.2e-07 57.0 82 43.9
AUR62005728 Chenopodium quinoa HOM05D000635 ORTHO05D000488 1.6e-06 56.2 83 42.2
AUR62028832 Chenopodium quinoa HOM05D000635 ORTHO05D000488 1.6e-06 56.2 83 42.2
Glyma.05G029700 Glycine max HOM05D000635 ORTHO05D000488 1.6e-06 56.2 78 38.5
Lsat_1_v5_gn_3_51460 Lactuca sativa HOM05D000635 ORTHO05D000488 2.0e-06 55.8 84 40.5
CAN.G1711.4 Capsicum annuum HOM05D000635 ORTHO05D000488 2.7e-06 55.5 82 41.5
Lj5P115T18 Lonicera japonica HOM05D000635 ORTHO05D000488 2.7e-06 55.5 79 44.3
RcHm_v2.0_Chr4g0440571 Rosa chinensis HOM05D000635 ORTHO05D000488 2.7e-06 55.5 84 39.3
Ciclev10012445m.g Citrus clementina HOM05D000635 ORTHO05D000488 3.5e-06 55.1 79 40.5
Dinv06514 Davidia involucrata HOM05D000635 ORTHO05D000488 3.5e-06 55.1 84 42.9
Dinv24957 Davidia involucrata HOM05D000635 ORTHO05D000488 3.5e-06 55.1 84 40.5
Peaxi162Scf00300g00837 Petunia axillaris HOM05D000635 ORTHO05D000488 3.5e-06 55.1 84 41.7
THA.LOC104821046 Tarenaya hassleriana HOM05D000635 ORTHO05D000488 3.5e-06 55.1 84 42.9
Duzib248G1640 Durio zibethinus HOM05D000635 ORTHO05D000488 4.5e-06 54.7 84 40.5
Potri.010G033500 Populus trichocarpa HOM05D000635 ORTHO05D000488 4.5e-06 54.7 84 38.1
ClCG10G014810 Citrullus lanatus HOM05D000635 ORTHO05D000488 5.9e-06 54.3 84 40.5
QL02p080619 Quercus lobata HOM05D000635 ORTHO05D000488 5.9e-06 54.3 84 40.5
Sed0012213 Sechium edule HOM05D000635 ORTHO05D000488 5.9e-06 54.3 84 41.7
Aa31LG5G12340 Aethionema arabicum HOM05D000635 ORTHO05D000488 7.8e-06 53.9 78 39.7
CARHR198230 Cardamine hirsuta HOM05D000635 ORTHO05D000488 7.8e-06 53.9 77 40.3
CiPaw.03G029900 Carya illinoinensis HOM05D000635 ORTHO05D000488 7.8e-06 53.9 84 38.1
MELO3C009893.2 Cucumis melo HOM05D000635 ORTHO05D000488 7.8e-06 53.9 84 40.5


User provided reference genes

Program Settings