Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.1e-96 356.7 186 100.0
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 3.8e-73 278.5 181 80.7
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 3.4e-58 228.8 184 70.1
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.4e-58 228.8 184 70.1
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 4.5e-58 228.4 176 72.2
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.7e-57 226.5 172 71.5
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 7.7e-50 201.1 177 64.4
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 2.1e-39 166.4 159 61.0
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 2.7e-39 166.0 126 70.6
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 6.1e-39 164.9 163 58.3
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 1.0e-38 164.1 115 73.0
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.8e-38 163.3 159 60.4
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 2.0e-37 159.8 122 70.5
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.7e-36 156.8 118 68.6
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 2.2e-36 156.4 135 63.7
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 2.8e-36 156.0 171 55.6
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 4.8e-36 155.2 116 68.1
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 6.3e-36 154.8 140 60.7
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 1.1e-35 154.1 112 73.2
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 1.8e-35 153.3 131 64.1
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.8e-35 153.3 132 65.2
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.7e-34 149.4 113 70.8
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 4.5e-34 148.7 123 64.2
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 1.7e-33 146.7 108 69.4
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.2e-33 146.4 136 58.8
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 2.5e-32 142.9 119 65.5
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 3.2e-32 142.5 171 50.9
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 4.2e-32 142.1 122 62.3
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 9.4e-32 141.0 114 67.5
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-31 139.8 113 65.5
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-31 139.8 113 65.5
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-31 139.8 113 65.5
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-31 139.8 113 65.5
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 3.6e-31 139.0 134 51.5
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.6e-31 139.0 113 65.5
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.6e-31 139.0 113 64.6
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 6.1e-31 138.3 117 57.3
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 6.1e-31 138.3 134 51.5
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 1.0e-30 137.5 129 53.5
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 1.0e-30 137.5 129 53.5
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 2.3e-30 136.3 114 57.9
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 2.3e-30 136.3 116 57.8
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 3.0e-30 136.0 133 51.1
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 5.2e-30 135.2 130 54.6
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 6.8e-30 134.8 131 51.9
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 6.8e-30 134.8 114 57.0
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 8.8e-30 134.4 120 60.0
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.2e-29 134.0 113 62.8
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 1.2e-29 134.0 114 57.0
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 2.0e-29 133.3 114 56.1
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 3.4e-29 132.5 113 64.6
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 7.5e-29 131.3 114 57.0
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 1.7e-28 130.2 114 58.8
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 8.3e-28 127.9 114 55.3
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 2.4e-27 126.3 106 66.0
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 2.4e-27 126.3 109 60.6
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 5.4e-27 125.2 84 77.4
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 9.1e-27 124.4 159 49.7
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 1.6e-26 123.6 86 70.9
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 1.6e-26 123.6 115 57.4
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.9e-25 119.4 113 61.1
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 5.0e-25 118.6 110 62.7
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.4e-22 110.5 117 49.6
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.4e-22 110.5 117 49.6
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 4.0e-22 109.0 80 67.5
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 4.5e-18 95.5 65 76.9
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 8.6e-17 91.3 69 68.1
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 1.0e-14 84.3 56 76.8
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 8.9e-14 81.3 97 46.4
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 4.9e-12 75.5 53 71.7
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 3.2e-11 72.8 73 53.4
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 1.6e-10 70.5 117 43.6


User provided reference genes

Program Settings