Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1090800 Malus domestica HOM05D000876 ORTHO05D000285 1.3e-54 216.1 107 100.0
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 6.9e-35 150.6 106 72.6
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 1.8e-27 125.9 103 59.2
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 1.8e-27 125.9 103 59.2
Prupe.4G113600 Prunus persica HOM05D000876 ORTHO05D000285 1.3e-25 119.8 102 56.9
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 6.4e-17 90.9 90 52.2
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 1.4e-16 89.7 99 48.5
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.8e-14 82.8 91 49.5
RcHm_v2.0_Chr7g0199281 Rosa chinensis HOM05D000876 ORTHO05D000285 2.3e-14 82.4 104 48.1
Atru.chr5.1610 Acer truncatum HOM05D000034 ORTHO05D000037 3.9e-14 81.6 91 54.9
FvH4_6g53022 Fragaria vesca HOM05D000876 ORTHO05D000285 5.1e-14 81.3 91 51.6
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.1e-14 81.3 91 48.4
FAN02G2262 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.7e-14 80.9 91 51.6
FvH4_7g00070 Fragaria vesca HOM05D000876 ORTHO05D000285 8.7e-14 80.5 91 50.5
RcHm_v2.0_Chr5g0029731 Rosa chinensis HOM05D000876 ORTHO05D000285 1.1e-13 80.1 91 49.5
FAN06G3321 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.9e-13 79.3 88 51.1
RcHm_v2.0_Chr2g0103961 Rosa chinensis HOM05D000876 ORTHO05D000285 1.9e-13 79.3 103 43.7
FAN14G5489 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.3e-13 78.6 91 47.3
RcHm_v2.0_Chr2g0128681 Rosa chinensis HOM05D000876 ORTHO05D000285 9.6e-13 77.0 100 43.0
FAN10G2724 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-12 76.6 88 50.0
FAN22G0382 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-12 76.6 99 45.5
FAN02G2707 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.6e-12 76.3 101 44.6
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-12 75.9 101 44.6
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-12 75.9 101 44.6
RcHm_v2.0_Chr6g0254701 Rosa chinensis HOM05D000876 ORTHO05D000285 2.1e-12 75.9 104 41.3
FAN25G1382 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.8e-12 75.5 103 42.7
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 3.7e-12 75.1 101 43.6
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 3.7e-12 75.1 101 43.6
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.7e-12 75.1 97 45.4
FAN05G0722 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.7e-12 75.1 95 43.2
FAN07G1275 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.7e-12 75.1 101 43.6
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 6.2e-12 74.3 86 50.0
FAN23G0201 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.2e-12 73.9 101 42.6
FAN23G2351 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.2e-12 73.9 101 42.6
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-11 73.6 101 43.6
FAN08G0806 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-11 73.2 88 51.1
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 1.8e-11 72.8 101 42.6
FAN02G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.8e-11 72.8 101 42.6
FAN11G2465 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.9e-11 70.9 98 42.9
FAN21G1280 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.0e-10 69.3 100 40.0
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.6e-10 68.9 101 40.6
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 3.4e-10 68.6 91 44.0
FAN09G3353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.4e-10 68.6 100 39.0
FAN21G2190 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.4e-10 68.6 88 47.7
FAN05G4445 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.7e-09 66.2 71 54.9
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 2.9e-09 65.5 100 38.0
FAN05G3178 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.8e-09 65.1 99 39.4
FAN05G4669 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.9e-09 64.7 99 38.4
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 6.5e-09 64.3 100 38.0
FvH4_1g28413 Fragaria vesca HOM05D000876 ORTHO05D015047 8.4e-09 63.9 100 37.0
FAN09G1076 Fragaria x ananassa HOM05D000001 ORTHO05D000003 8.4e-09 63.9 87 43.7
FAN10G2634 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.4e-09 63.9 71 52.1
FAN19G2459 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.4e-09 63.9 99 37.4
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 3.2e-08 62.0 98 39.8
FAN08G3019 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.2e-08 61.6 104 36.5
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.5e-08 61.2 99 36.4
FAN10G0055 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.5e-08 61.2 71 52.1
FAN12G2878 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.3e-08 60.5 99 38.4
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 1.2e-07 60.1 98 39.8
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 1.2e-07 60.1 98 39.8
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-07 59.3 98 39.8
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-07 59.3 98 38.8
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-07 59.3 98 39.8
arahy.Tifrunner.gnm1.ann1.T11VTH Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-07 58.9 100 34.0
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 3.5e-07 58.5 97 40.2
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 3.5e-07 58.5 97 40.2
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 6.0e-07 57.8 98 38.8
Atru.chr11.998 Acer truncatum HOM05D000876 ORTHO05D000285 1.3e-06 56.6 98 37.8
Atru.chr5.3371 Acer truncatum HOM05D000876 ORTHO05D000285 1.3e-06 56.6 98 37.8
CANSAT35G0018 Cannabis sativa HOM05D000876 ORTHO05D000285 1.3e-06 56.6 97 38.1
PSO507G0009 Papaver somniferum HOM05D000876 ORTHO05D000285 1.3e-06 56.6 106 31.1
QL02p025824 Quercus lobata HOM05D013302 ORTHO05D015047 1.8e-06 56.2 99 38.4
Atru.chr10.824 Acer truncatum HOM05D000876 ORTHO05D000285 5.1e-06 54.7 95 32.6
CANSAT54G1231 Cannabis sativa HOM05D000876 ORTHO05D000285 5.1e-06 54.7 100 38.0
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.1e-06 54.7 95 35.8
CANSAT35G1570 Cannabis sativa HOM05D000876 ORTHO05D000285 6.7e-06 54.3 93 37.6
FAN21G2068 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.7e-06 54.3 85 36.5
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 8.7e-06 53.9 95 32.6
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 8.7e-06 53.9 98 37.8
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 8.7e-06 53.9 97 39.2


User provided reference genes

Program Settings