Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 0.0e+00 1577.4 805 100.0
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 0.0e+00 1414.1 805 89.6
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 0.0e+00 1322.0 807 84.5
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 0.0e+00 1212.2 802 76.6
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 0.0e+00 1190.6 804 75.1
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 0.0e+00 1188.7 812 74.5
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 0.0e+00 1186.0 812 74.4
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 0.0e+00 1185.2 812 75.0
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 0.0e+00 1181.4 812 74.4
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 0.0e+00 1135.6 812 70.9
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 3.8e-303 1044.6 804 66.3
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 8.4e-303 1043.5 808 67.6
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 8.7e-300 1033.5 871 63.4
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 4.8e-298 1027.7 807 65.6
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.0e-295 1020.0 867 63.0
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 4.6e-293 1011.1 807 63.8
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 1.1e-289 1000.0 811 63.1
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 6.9e-289 997.3 809 63.3
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.0e-288 995.7 808 63.4
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.6e-288 995.3 818 62.6
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 5.9e-288 994.2 813 62.7
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 1.7e-287 992.6 810 63.2
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 1.4e-286 989.6 810 64.0
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 7.2e-286 987.3 809 62.8
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 1.2e-285 986.5 817 64.7
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 4.6e-285 984.6 824 63.1
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.3e-284 982.2 809 62.2
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.1e-283 979.9 808 62.9
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 6.3e-282 974.2 810 61.7
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 9.0e-281 970.3 795 60.4
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 3.8e-279 964.9 811 63.0
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 5.0e-279 964.5 813 61.9
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 5.1e-276 954.5 809 60.9
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 3.3e-275 951.8 800 59.4
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 5.7e-275 951.0 800 59.2
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 2.4e-273 945.7 800 58.6
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 6.9e-273 944.1 816 59.3
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 2.5e-270 935.6 808 59.5
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 2.7e-269 932.2 800 58.9
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 3.6e-269 931.8 800 57.1
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 8.8e-268 927.2 806 58.8
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 8.8e-268 927.2 813 58.9
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 2.6e-267 925.6 802 58.6
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 2.8e-266 922.2 811 59.2
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 8.2e-266 920.6 806 58.3
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 3.1e-265 918.7 800 58.4
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 4.1e-265 918.3 802 58.2
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 2.0e-264 916.0 807 58.1
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 2.6e-264 915.6 798 58.1
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 3.5e-264 915.2 803 58.4
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.1e-262 910.2 832 57.8
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 1.9e-262 909.4 823 58.3
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 4.2e-262 908.3 805 57.6
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 2.1e-261 906.0 831 55.2
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 8.0e-261 904.0 823 58.1
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 4.0e-260 901.7 805 57.4
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 8.8e-260 900.6 814 57.6
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 5.3e-257 891.3 805 56.6
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 9.1e-257 890.6 805 56.4
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 2.2e-255 885.9 802 58.6
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 1.1e-254 883.6 807 56.6
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 1.5e-254 883.2 813 56.8
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 7.2e-254 880.9 803 56.8
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 9.4e-254 880.6 807 58.0
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 2.1e-253 879.4 806 56.5
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 3.6e-253 878.6 806 56.5
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 1.0e-252 877.1 807 56.3
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.4e-252 876.7 802 55.7
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 1.4e-252 876.7 643 67.2
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 2.8e-250 869.0 860 52.9
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 4.8e-250 868.2 814 57.0
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 1.4e-249 866.7 808 55.1
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 7.0e-249 864.4 816 55.1
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 3.2e-246 855.5 805 55.5
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.6e-245 853.2 768 56.5
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 2.0e-243 846.3 822 56.7
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 9.2e-241 837.4 805 55.2
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 8.9e-236 820.8 809 53.6
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 8.9e-236 820.8 815 55.1
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.1e-230 803.9 809 55.1
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 8.9e-228 794.3 806 54.6
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 5.8e-227 791.6 647 61.7
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 3.5e-224 782.3 756 54.6
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 3.5e-224 782.3 807 51.8
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 1.6e-221 773.5 799 53.2
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 3.0e-215 752.7 839 50.7
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 4.7e-213 745.3 666 57.4
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 6.2e-213 745.0 801 49.1
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 2.3e-212 743.0 585 64.4
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 4.0e-212 742.3 646 61.5
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 6.4e-210 734.9 795 51.2
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.3e-199 700.7 817 46.6
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 2.0e-179 633.6 829 44.4
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 2.6e-163 580.1 618 53.6
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 2.6e-147 526.9 809 39.9
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 4.5e-131 473.0 809 40.2
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 3.4e-118 430.3 805 36.1
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 6.0e-107 392.9 861 33.0
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 5.6e-97 359.8 299 61.2
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 1.1e-95 355.5 254 71.7
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 2.7e-91 340.9 428 46.5
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 2.3e-90 337.8 267 61.4
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 4.3e-89 333.6 257 65.4
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 2.8e-88 330.9 852 30.0
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 5.2e-87 326.6 289 57.8
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 1.5e-86 325.1 289 57.8
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.6e-72 278.5 272 53.7
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 9.0e-55 219.5 182 59.9
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 6.1e-51 206.8 203 52.2
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 2.5e-49 201.4 208 51.4
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.2e-43 182.6 128 68.0
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 3.1e-39 167.9 173 49.7
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-38 165.6 1016 21.9
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 1.0e-34 152.9 258 38.0
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 1.7e-29 135.6 87 74.7
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 1.8e-18 99.0 116 50.0
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 1.3e-13 82.8 188 33.5
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 1.3e-13 82.8 684 21.8
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 1.9e-12 79.0 61 54.1
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 5.5e-12 77.4 45 75.6
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 9.8e-09 66.6 50 66.0
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 4.1e-07 61.2 49 61.2


User provided reference genes

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