Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 3.9e-149 531.6 295 100.0
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 2.6e-84 316.2 205 82.4
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 2.3e-72 276.6 205 72.7
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 7.3e-71 271.6 198 75.3
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.1e-70 270.0 206 72.8
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.8e-69 266.9 206 71.8
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.4e-69 266.5 206 71.8
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 2.4e-69 266.5 196 75.0
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.1e-69 266.2 205 72.2
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 6.9e-69 265.0 206 71.4
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 2.2e-67 260.0 207 67.6
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 1.1e-66 257.7 205 69.3
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 4.2e-66 255.8 198 69.2
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 4.2e-66 255.8 206 67.5
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 9.3e-66 254.6 196 70.4
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 1.0e-64 251.1 196 69.4
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.0e-64 251.1 206 65.5
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 2.3e-64 250.0 201 66.2
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 3.0e-64 249.6 196 67.9
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 6.7e-64 248.4 205 65.4
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 8.7e-64 248.1 205 64.9
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 8.7e-64 248.1 205 64.9
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 2.5e-63 246.5 198 66.7
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 1.3e-62 244.2 204 67.2
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.6e-62 243.8 205 63.4
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 2.1e-62 243.4 206 67.0
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 6.2e-62 241.9 205 64.9
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 8.1e-62 241.5 196 67.3
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 2.4e-61 240.0 214 62.1
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 3.1e-61 239.6 214 62.6
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 5.3e-61 238.8 206 62.6
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 9.0e-61 238.0 214 61.7
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 9.0e-61 238.0 214 61.7
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 9.0e-61 238.0 206 66.0
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 1.2e-60 237.7 206 62.1
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 1.5e-60 237.3 206 65.5
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 2.0e-60 236.9 203 64.5
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 5.8e-60 235.3 205 64.4
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 3.8e-59 232.6 215 60.9
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 6.4e-59 231.9 198 63.6
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 8.4e-59 231.5 196 63.3
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 1.9e-58 230.3 201 61.7
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 2.5e-58 229.9 196 63.8
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 4.2e-58 229.2 203 63.5
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 4.2e-58 229.2 202 61.4
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 1.6e-57 227.3 196 62.8
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 1.6e-57 227.3 200 63.5
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 1.6e-57 227.3 203 61.6
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 3.5e-57 226.1 206 61.2
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 4.6e-57 225.7 211 60.2
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 4.6e-57 225.7 215 58.6
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 1.8e-56 223.8 208 60.1
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 2.3e-56 223.4 208 61.5
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 2.3e-56 223.4 205 58.0
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 2.3e-56 223.4 204 61.3
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 3.9e-56 222.6 197 61.9
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 3.9e-56 222.6 215 59.1
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 5.1e-56 222.2 209 59.8
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 5.1e-56 222.2 199 59.3
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 5.1e-56 222.2 206 59.7
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 6.7e-56 221.9 213 57.7
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 6.7e-56 221.9 213 59.6
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 8.7e-56 221.5 206 61.2
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 8.7e-56 221.5 209 60.3
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 1.1e-55 221.1 216 60.2
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 2.5e-55 219.9 195 62.1
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 2.5e-55 219.9 242 55.4
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 3.3e-55 219.5 195 62.1
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 3.3e-55 219.5 211 59.2
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 5.6e-55 218.8 207 59.9
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 5.6e-55 218.8 207 59.9
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 7.4e-55 218.4 207 59.4
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 7.4e-55 218.4 207 59.4
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 7.4e-55 218.4 214 59.8
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 9.6e-55 218.0 206 59.7
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 1.3e-54 217.6 215 57.7
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 1.3e-54 217.6 215 57.7
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 1.3e-54 217.6 204 59.3
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 1.6e-54 217.2 202 60.4
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 1.6e-54 217.2 197 60.9
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 2.1e-54 216.9 196 61.2
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 2.8e-54 216.5 200 62.0
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 6.2e-54 215.3 199 58.8
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 8.2e-54 214.9 213 60.1
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 1.1e-53 214.5 207 58.9
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 2.4e-53 213.4 198 60.1
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 5.3e-53 212.2 195 61.0
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 6.9e-53 211.8 207 58.9
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 1.2e-52 211.1 206 58.3
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.5e-52 210.7 198 58.6
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.3e-51 207.6 200 59.5
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 2.9e-51 206.5 197 57.4
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 6.5e-51 205.3 201 56.2
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 7.1e-50 201.8 200 59.0
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 6.1e-49 198.7 200 57.5
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 7.9e-49 198.4 197 57.9
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 2.3e-48 196.8 212 56.6
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 3.0e-48 196.4 149 71.1
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 3.9e-48 196.1 169 60.4
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 5.1e-48 195.7 165 63.0
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 5.1e-48 195.7 165 63.0
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 1.9e-47 193.7 139 74.8
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 3.1e-45 186.4 187 55.1
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 1.6e-41 174.1 170 58.2
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 2.1e-41 173.7 368 35.9
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 2.5e-39 166.8 185 54.1
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 1.3e-38 164.5 155 55.5
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 4.1e-37 159.5 116 73.3
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 4.1e-37 159.5 122 72.1
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 2.2e-35 153.7 120 65.8
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 2.9e-35 153.3 156 53.8
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 2.1e-33 147.1 114 68.4
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 8.8e-32 141.7 136 55.9
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 5.7e-31 139.0 135 60.0
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 2.6e-28 130.2 185 41.6
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 7.7e-28 128.6 127 56.7
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 6.5e-27 125.6 121 53.7
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 8.5e-27 125.2 127 55.1
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.8e-22 110.2 73 80.8
ClCG06G003760 Citrullus lanatus HOM05D006023 ORTHO05D007377 1.4e-21 107.8 112 57.1
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 4.1e-21 106.3 109 53.2
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 1.6e-20 104.4 63 81.0
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 2.5e-18 97.1 202 31.2
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 2.5e-18 97.1 72 69.4
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 8.8e-16 88.6 74 64.9
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 1.5e-15 87.8 61 78.7
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 1.4e-13 81.3 129 42.6
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 2.0e-12 77.4 55 69.1
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 1.3e-11 74.7 125 35.2
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 8.5e-11 72.0 62 64.5
BcaNung06895 Brassica carinata HOM05D006023 ORTHO05D007377 2.1e-09 67.4 85 45.9


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