Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 6.8e-68 260.8 155 100.0
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 1.2e-56 223.4 155 86.5
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 3.8e-42 175.3 155 58.7
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 6.0e-40 167.9 155 60.0
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 5.3e-36 154.8 155 52.9
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 7.6e-35 151.0 155 52.3
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.3e-34 150.2 155 51.6
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.4e-25 120.2 156 46.2
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 5.5e-25 118.2 123 54.5
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 9.3e-25 117.5 157 46.5
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 7.4e-22 107.8 158 45.6
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 1.8e-20 103.2 123 49.6
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.4e-20 102.8 109 51.4
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 2.2e-18 96.3 126 48.4
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 5.0e-18 95.1 157 41.4
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 1.1e-17 94.0 122 47.5
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 1.1e-17 94.0 122 48.4
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.4e-17 93.6 122 47.5
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 2.5e-17 92.8 130 43.8
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 2.5e-17 92.8 156 39.7
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 9.3e-17 90.9 159 39.6
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 9.3e-17 90.9 156 37.2
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.2e-16 90.5 156 35.9
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.2e-16 90.5 156 35.9
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.2e-16 90.5 122 46.7
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 1.0e-15 87.4 124 45.2
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 1.0e-15 87.4 158 37.3
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 3.0e-15 85.9 123 43.9
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 5.1e-15 85.1 163 38.0
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 6.7e-15 84.7 159 36.5
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 2.5e-14 82.8 123 43.1
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 2.5e-14 82.8 122 44.3
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 7.4e-14 81.3 165 33.3
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 9.7e-14 80.9 157 36.3
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 2.2e-13 79.7 121 39.7
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 6.3e-13 78.2 124 41.9
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.1e-12 77.4 158 36.1
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 1.4e-12 77.0 124 41.9
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 1.8e-12 76.6 123 42.3
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 2.4e-12 76.3 155 36.8
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 6.9e-12 74.7 155 36.1
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 3.4e-11 72.4 157 35.7
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 5.9e-11 71.6 155 33.5
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 5.9e-11 71.6 124 36.3
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 1.3e-10 70.5 137 35.8
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.9e-10 69.3 156 34.6
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 5.0e-10 68.6 139 38.8
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 5.0e-10 68.6 121 41.3
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 6.5e-10 68.2 121 40.5
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 1.1e-09 67.4 158 32.3
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.1e-09 67.4 157 34.4
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 9.4e-09 64.3 125 32.8
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 1.0e-07 60.8 123 35.0
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 3.0e-07 59.3 95 41.1
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 6.7e-07 58.2 78 44.9
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 1.5e-06 57.0 88 36.4
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 3.3e-06 55.8 92 41.3
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 9.7e-06 54.3 91 36.3


User provided reference genes

Program Settings