Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 3.8e-71 271.6 153 100.0
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 4.5e-56 221.5 155 86.5
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 6.3e-42 174.5 155 60.6
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 2.9e-39 165.6 155 60.6
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 5.2e-36 154.8 155 54.8
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.6e-35 152.5 155 54.8
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 4.4e-35 151.8 155 54.2
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 6.6e-23 111.3 156 46.8
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 6.6e-23 111.3 146 47.9
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 9.5e-22 107.5 109 53.2
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 2.8e-21 105.9 158 45.6
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 6.2e-21 104.8 156 44.9
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 6.8e-20 101.3 154 40.9
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 2.6e-19 99.4 156 44.2
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 2.6e-19 99.4 147 44.9
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 7.5e-19 97.8 168 36.9
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 9.8e-19 97.4 158 42.4
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.7e-18 96.7 156 40.4
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.7e-18 96.7 156 40.4
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 2.9e-18 95.9 159 39.6
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 6.4e-18 94.7 156 38.5
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 1.1e-17 94.0 144 41.7
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.4e-17 93.6 144 41.7
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 7.1e-17 91.3 149 43.0
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 9.2e-17 90.9 143 40.6
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 2.1e-16 89.7 153 39.9
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 2.7e-16 89.4 160 36.9
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 1.7e-15 86.7 159 38.4
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 3.0e-15 85.9 153 38.6
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 6.6e-15 84.7 128 45.3
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 1.5e-14 83.6 163 34.4
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 1.9e-14 83.2 153 38.6
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.9e-14 83.2 157 37.6
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 4.3e-14 82.0 152 38.8
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 5.6e-14 81.6 157 38.9
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 7.3e-14 81.3 127 41.7
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 2.8e-13 79.3 152 38.2
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.8e-13 79.3 156 37.8
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 3.6e-13 79.0 158 36.7
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 4.7e-13 78.6 151 36.4
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 8.1e-13 77.8 154 39.0
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 1.4e-12 77.0 152 36.8
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 1.4e-12 77.0 165 35.2
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 5.2e-12 75.1 157 37.6
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.2e-11 73.9 158 36.1
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 2.6e-11 72.8 156 35.3
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 2.6e-11 72.8 154 35.1
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 4.4e-11 72.0 160 35.0
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 3.8e-10 68.9 165 30.9
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 3.8e-10 68.9 165 34.5
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 1.4e-09 67.0 124 35.5
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 9.2e-09 64.3 122 36.9
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 2.7e-08 62.8 153 34.0
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.5e-08 62.4 111 36.0
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 1.9e-06 56.6 156 30.1
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 4.3e-06 55.5 90 37.8
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 4.3e-06 55.5 89 40.4
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 7.3e-06 54.7 95 38.9


User provided reference genes

Program Settings