Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1024100 Malus domestica HOM05D005225 ORTHO05D006830 3.9e-232 807.7 403 100.0
MD16G1281400 Malus domestica HOM05D005225 ORTHO05D006830 8.7e-208 726.9 446 83.6
Prupe.1G566200 Prunus persica HOM05D005225 ORTHO05D006830 3.7e-198 694.9 447 78.1
RcHm_v2.0_Chr7g0212391 Rosa chinensis HOM05D005225 ORTHO05D006830 4.2e-186 654.8 444 73.2
FvH4_4g10620 Fragaria vesca HOM05D005225 ORTHO05D006830 7.4e-183 644.0 444 71.8
FAN12G0824 Fragaria x ananassa HOM05D005225 ORTHO05D006830 7.4e-183 644.0 444 72.1
FAN12G2267 Fragaria x ananassa HOM05D005225 ORTHO05D006830 6.3e-182 641.0 444 71.8
Cfa008863 Carpinus fangiana HOM05D005225 ORTHO05D006830 1.0e-176 623.6 442 69.2
Haze_11886 Corylus avellana HOM05D005225 ORTHO05D006830 1.8e-176 622.9 442 69.5
Potri.008G097400 Populus trichocarpa HOM05D005225 ORTHO05D006830 3.3e-175 618.6 442 69.2
Dinv34052 Davidia involucrata HOM05D005225 ORTHO05D006830 9.7e-175 617.1 440 68.9
Rhsim09G0126000 Rhododendron simsii HOM05D005225 ORTHO05D006830 4.8e-174 614.8 443 67.9
Sabra08G0073600 Salix brachista HOM05D005225 ORTHO05D006830 8.2e-174 614.0 442 68.3
COL.COLO4_27858 Corchorus olitorius HOM05D005225 ORTHO05D006830 1.6e-172 609.8 442 67.6
Manes.10G001000 Manihot esculenta HOM05D005225 ORTHO05D006830 3.5e-172 608.6 441 68.5
Cpa.g.sc1.153 Carica papaya HOM05D005225 ORTHO05D006830 1.0e-171 607.1 443 67.7
QL03p073750 Quercus lobata HOM05D005225 ORTHO05D006830 3.8e-171 605.1 440 67.5
Lalb_Chr10g0098931 Lupinus albus HOM05D005225 ORTHO05D006830 1.1e-170 603.6 421 70.3
QL02p092646 Quercus lobata HOM05D005225 ORTHO05D006830 7.2e-170 600.9 440 66.6
Thecc.02G327800 Theobroma cacao HOM05D005225 ORTHO05D006830 1.2e-169 600.1 442 66.7
CANSAT80G1664 Cannabis sativa HOM05D005225 ORTHO05D006830 4.7e-169 598.2 443 65.7
Ciclev10031260m.g Citrus clementina HOM05D005225 ORTHO05D006830 1.4e-168 596.7 437 67.5
Duzib251G0330 Durio zibethinus HOM05D005225 ORTHO05D006830 1.4e-168 596.7 442 66.3
Lalb_Chr04g0255551 Lupinus albus HOM05D005225 ORTHO05D006830 1.8e-168 596.3 442 67.0
CiPaw.06G093200 Carya illinoinensis HOM05D005225 ORTHO05D006830 6.8e-168 594.3 442 66.1
Eucgr.F03034 Eucalyptus grandis HOM05D005225 ORTHO05D006830 2.0e-167 592.8 443 67.3
Atru.chr11.1603 Acer truncatum HOM05D005225 ORTHO05D006830 2.6e-167 592.4 443 65.7
CSS0003869 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 2.6e-167 592.4 440 66.4
DCAR_004043 Daucus carota HOM05D005225 ORTHO05D006830 2.6e-167 592.4 442 64.7
Medtr5g044980 Medicago truncatula HOM05D005225 ORTHO05D006830 2.8e-166 589.0 440 65.7
vmacro01311 Vaccinium macrocarpon HOM05D005225 ORTHO05D006830 6.3e-166 587.8 441 65.3
TWI79G0826 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 1.1e-165 587.0 443 65.5
Lj2g0003273 Lotus japonicus HOM05D005225 ORTHO05D006830 2.4e-165 585.9 440 66.1
arahy.Tifrunner.gnm1.ann1.W47LMS Arachis hypogaea HOM05D005225 ORTHO05D006830 1.6e-164 583.2 442 64.0
ClCG11G000950 Citrullus lanatus HOM05D005225 ORTHO05D006830 1.6e-164 583.2 442 64.0
TWI75G0045 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 2.0e-164 582.8 443 65.7
Lj3P1029T28 Lonicera japonica HOM05D005225 ORTHO05D006830 2.7e-164 582.4 441 65.5
Psat2g131720 Pisum sativum HOM05D005225 ORTHO05D006830 2.7e-164 582.4 442 65.8
arahy.Tifrunner.gnm1.ann1.BYWX90 Arachis hypogaea HOM05D005225 ORTHO05D006830 4.5e-164 581.6 442 63.8
VMungo1215G0332 Vigna mungo HOM05D005225 ORTHO05D006830 5.9e-164 581.3 442 65.8
Gorai.008G176100 Gossypium raimondii HOM05D005225 ORTHO05D006830 7.7e-164 580.9 440 65.5
arahy.Tifrunner.gnm1.ann1.BAL663 Arachis hypogaea HOM05D005225 ORTHO05D006830 1.7e-163 579.7 442 63.6
TPR.G23155 Trifolium pratense HOM05D005225 ORTHO05D006830 1.7e-163 579.7 442 65.8
FAN17G1346 Fragaria x ananassa HOM05D005225 ORTHO05D006830 6.5e-163 577.8 410 70.5
arahy.Tifrunner.gnm1.ann1.1IY8V2 Arachis hypogaea HOM05D005225 ORTHO05D006830 8.5e-163 577.4 442 63.6
Ca_05000_v3 Cicer arietinum L. HOM05D005225 ORTHO05D006830 8.5e-163 577.4 440 65.2
Peaxi162Scf00175g00052 Petunia axillaris HOM05D005225 ORTHO05D006830 1.5e-162 576.6 441 64.2
Glyma.02G120400 Glycine max HOM05D005225 ORTHO05D006830 3.2e-162 575.5 445 64.5
TPR.G23738 Trifolium pratense HOM05D005225 ORTHO05D006830 3.2e-162 575.5 442 65.6
PGR102G0586 Punica granatum HOM05D005225 ORTHO05D006830 9.5e-162 573.9 442 64.0
Aqoxy6G03037 Aquilegia oxysepala HOM05D005225 ORTHO05D006830 1.2e-161 573.5 442 62.9
MELO3C020077.2 Cucumis melo HOM05D005225 ORTHO05D006830 1.6e-161 573.2 442 63.6
Nitab4.5_0000231g0060 Nicotiana tabacum HOM05D005225 ORTHO05D006830 2.1e-161 572.8 440 64.5
AT4G30000 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 4.7e-161 571.6 442 62.4
Sopen05g006880 Solanum pennellii HOM05D005225 ORTHO05D006830 4.7e-161 571.6 441 64.6
HanXRQChr12g0375111 Helianthus annuus HOM05D005225 ORTHO05D006830 6.1e-161 571.2 437 64.5
Carub.0007s1065 Capsella rubella HOM05D005225 ORTHO05D006830 1.0e-160 570.5 442 62.4
Nitab4.5_0007734g0040 Nicotiana tabacum HOM05D005225 ORTHO05D006830 1.0e-160 570.5 441 65.1
CsaV3_5G008630 Cucumis sativus L. HOM05D005225 ORTHO05D006830 1.4e-160 570.1 442 62.9
AL7G22240 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 1.5e-159 566.6 442 62.0
CAN.G707.21 Capsicum annuum HOM05D005225 ORTHO05D006830 1.5e-159 566.6 442 63.3
Sp7g27800 Schrenkiella parvula HOM05D005225 ORTHO05D006830 1.5e-159 566.6 442 62.0
CARHR237920 Cardamine hirsuta HOM05D005225 ORTHO05D006830 5.7e-159 564.7 441 61.7
Cc11_g11810 Coffea canephora HOM05D005225 ORTHO05D006830 7.5e-159 564.3 437 63.2
PGSC0003DMG400028362 Solanum tuberosum HOM05D005225 ORTHO05D006830 7.5e-159 564.3 441 63.7
Hma1.2p1_0051F.1_g029440 Hydrangea macrophylla HOM05D005225 ORTHO05D006830 1.7e-158 563.1 444 63.3
Thhalv10024845m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 2.8e-158 562.4 442 61.8
Sed0018680 Sechium edule HOM05D005225 ORTHO05D006830 3.7e-158 562.0 440 61.8
PSO017G1582 Papaver somniferum HOM05D005225 ORTHO05D006830 1.1e-157 560.5 442 63.6
Hund25165 Selenicereus undatus HOM05D005225 ORTHO05D006830 3.1e-157 558.9 439 62.6
Lsat_1_v5_gn_3_53701 Lactuca sativa HOM05D005225 ORTHO05D006830 1.2e-156 557.0 439 63.3
ECA246G3793 Erigeron canadensis HOM05D005225 ORTHO05D006830 2.7e-156 555.8 437 62.2
Migut.L01174 Erythranthe guttata HOM05D005225 ORTHO05D006830 2.7e-156 555.8 441 59.9
SalBow2G3373 Salvia bowleyana HOM05D005225 ORTHO05D006830 2.7e-156 555.8 442 61.5
GSVIVG01012238001 Vitis vinifera HOM05D005225 ORTHO05D006830 1.3e-155 553.5 442 63.6
HanXRQChr03g0092011 Helianthus annuus HOM05D005225 ORTHO05D006830 1.7e-155 553.1 439 63.8
MBI16_g03095_MAGBIO Magnolia biondii HOM05D005225 ORTHO05D006830 1.7e-155 553.1 442 62.7
THA.LOC104821999 Tarenaya hassleriana HOM05D005225 ORTHO05D006830 2.9e-155 552.4 442 60.9
A01p08120 Brassica napus HOM05D005225 ORTHO05D006830 3.8e-155 552.0 440 60.5
MSTRG.7736 Avicennia marina HOM05D005225 ORTHO05D006830 8.6e-155 550.8 442 60.9
BraA01t00759Z Brassica rapa HOM05D005225 ORTHO05D006830 1.1e-154 550.4 440 60.5
Ah.03g138790 Amaranthus hybridus HOM05D005225 ORTHO05D006830 1.5e-154 550.1 437 62.0
AUR62003082 Chenopodium quinoa HOM05D005225 ORTHO05D006830 2.5e-154 549.3 439 61.5
BcaC09g51778 Brassica carinata HOM05D005225 ORTHO05D006830 3.3e-154 548.9 440 60.7
C01p09090 Brassica napus HOM05D005225 ORTHO05D006830 3.3e-154 548.9 440 60.7
BolC1t00900H Brassica oleracea HOM05D005225 ORTHO05D006830 3.3e-154 548.9 440 60.7
Aa31LG2G20560 Aethionema arabicum HOM05D005225 ORTHO05D006830 7.3e-154 547.7 442 59.3
Nn8g41224 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.2e-153 547.0 411 66.2
Sc04g0007480 Simmondsia chinensis HOM05D005225 ORTHO05D006830 1.6e-153 546.6 440 61.4
FAN07G1983 Fragaria x ananassa HOM05D005225 ORTHO05D006830 2.3e-152 542.7 390 69.5
Thhalv10019460m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 5.2e-152 541.6 441 60.5
Gohir.A12G160100 Gossypium hirsutum HOM05D005225 ORTHO05D006830 5.4e-149 531.6 439 61.7
Oeu055095.2 Olea europaea HOM05D005225 ORTHO05D006830 9.2e-149 530.8 444 59.7
unitig_22.g6894 Utricularia gibba HOM05D005225 ORTHO05D006830 2.0e-148 529.6 443 57.8
AT1G69190 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 5.0e-147 525.0 444 59.5
Os07g0618500 Oryza sativa ssp. japonica HOM05D005225 ORTHO05D006830 4.3e-146 521.9 441 57.8
Sp5g24250 Schrenkiella parvula HOM05D005225 ORTHO05D006830 2.1e-145 519.6 442 58.4
Gohir.D12G163500 Gossypium hirsutum HOM05D005225 ORTHO05D006830 2.8e-145 519.2 440 60.0
AL2G28280 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 8.0e-145 517.7 445 58.4
ATR0827G107 Amborella trichopoda HOM05D005225 ORTHO05D006830 1.3e-142 510.4 443 57.3
EL10Ac6g15018 Beta vulgaris HOM05D005225 ORTHO05D006830 1.4e-141 506.9 417 60.2
HPP92_017786 Vanilla planifolia HOM05D005225 ORTHO05D006830 1.4e-141 506.9 444 55.2
CSS0031076 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 4.6e-140 501.9 440 59.1
Aa31sc367G20 Aethionema arabicum HOM05D005225 ORTHO05D006830 5.0e-139 498.4 444 55.2
Zm00001eb319990 Zea mays HOM05D005225 ORTHO05D006830 1.9e-138 496.5 442 55.0
SEGI_35565 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 1.2e-137 493.8 439 56.0
TAR629G1144 Trochodendron aralioides HOM05D005225 ORTHO05D006830 3.4e-135 485.7 444 58.1
SGA_v2.0_scaffold85G26791 Striga asiatica HOM05D005225 ORTHO05D006830 1.6e-129 466.8 436 54.8
Solyc05g012090.4 Solanum lycopersicum HOM05D005225 ORTHO05D006830 2.3e-128 463.0 351 65.0
SHI01330 Sapria himalayana HOM05D005225 ORTHO05D006830 1.3e-126 457.2 438 54.8
RcHm_v2.0_Chr2g0139541 Rosa chinensis HOM05D005225 ORTHO05D006830 4.7e-121 438.7 322 69.9
Actinidia00572 Actinidia chinensis HOM05D005225 ORTHO05D006830 1.1e-117 427.6 440 53.4
Glyma.01G062200 Glycine max HOM05D005225 ORTHO05D006830 5.3e-112 408.7 347 60.8
AagrBONN_evm.TU.Sc2ySwM_362.716 Anthoceros agrestis HOM05D005225 ORTHO05D006830 1.2e-111 407.5 445 47.4
Nn2g15478 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.6e-108 397.1 331 60.7
AUR62007898 Chenopodium quinoa HOM05D005225 ORTHO05D006830 4.3e-106 389.0 339 58.4
Pp3c27_4310 Physcomitrium patens HOM05D005225 ORTHO05D006830 5.6e-106 388.7 439 46.5
SEGI_04122 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 7.4e-106 388.3 439 47.6
Mapoly0021s0079 Marchantia polymorpha HOM05D005225 ORTHO05D006830 1.8e-104 383.6 425 47.1
CDE04G0587 Ceratophyllum demersum HOM05D005225 ORTHO05D006830 7.9e-100 368.2 242 69.8
HanXRQChr04g0120931 Helianthus annuus HOM05D005225 ORTHO05D006830 1.1e-98 364.4 250 69.2
SMO358G0268 Selaginella moellendorffii HOM05D005225 ORTHO05D006830 1.5e-95 354.0 438 42.9
Phvul.007G262101 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 6.5e-94 348.6 295 61.4
Phvul.001G131450 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 4.2e-93 345.9 295 60.7
CBR_g61480 Chara braunii HOM05D005225 ORTHO05D006830 3.0e-83 313.2 445 41.1
SGA_v2.0_scaffold45G17115 Striga asiatica HOM05D001733 ORTHO05D001882 3.0e-83 313.2 347 49.3
MCO11G893 Micromonas commoda HOM05D005225 ORTHO05D006830 4.7e-68 262.7 515 35.7
Nn4g23480 Nelumbo nucifera HOM05D005225 ORTHO05D006830 2.5e-61 240.4 147 74.8
PRCOL_00003253 Prasinoderma coloniale HOM05D005225 ORTHO05D006830 1.0e-59 235.0 466 34.8
Cre10.g428550 Chlamydomonas reinhardtii HOM05D005225 ORTHO05D006830 1.4e-59 234.6 582 30.2
SGA_v2.0_scaffold16G07808 Striga asiatica HOM05D005225 ORTHO05D006830 1.2e-47 194.9 240 45.8
LjContig00272g0016968 Lotus japonicus HOM05D005225 ORTHO05D006830 6.5e-46 189.1 168 53.6
Actinidia16153 Actinidia chinensis HOM05D005225 ORTHO05D006830 2.8e-44 183.7 265 42.6
Cfa024768 Carpinus fangiana HOM05D005225 ORTHO05D124687 3.6e-44 183.3 430 32.3
TAR371G0727 Trochodendron aralioides HOM05D005225 ORTHO05D006830 2.8e-28 130.6 193 44.0
Nn4g23481 Nelumbo nucifera HOM05D005225 ORTHO05D006830 3.1e-27 127.1 92 71.7
RcHm_v2.0_Chr2g0139531 Rosa chinensis HOM05D005225 ORTHO05D006830 1.3e-25 121.7 80 70.0
SGA_v2.0_scaffold16G07809 Striga asiatica HOM05D005225 ORTHO05D048239 1.3e-25 121.7 95 57.9
HanXRQChr04g0120941 Helianthus annuus HOM05D005225 ORTHO05D048239 3.6e-20 103.6 76 60.5
Medtr0076s0050 Medicago truncatula HOM05D005225 ORTHO05D265034 4.4e-18 96.7 90 54.4
QL06p011620 Quercus lobata HOM05D005225 ORTHO05D006830 7.5e-18 95.9 68 73.5
CARHR062340 Cardamine hirsuta HOM05D005225 ORTHO05D006830 2.2e-17 94.4 69 63.8
HanXRQChr15g0477151 Helianthus annuus HOM05D005225 ORTHO05D044060 6.0e-15 86.3 58 69.0
AUR62007899 Chenopodium quinoa HOM05D005225 ORTHO05D044060 6.0e-07 59.7 31 80.6


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