Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 6.3e-283 976.9 523 100.0
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 5.4e-242 840.9 526 86.7
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 1.7e-227 792.7 526 81.0
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 2.7e-225 785.4 527 80.6
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 6.6e-224 780.8 527 80.1
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.5e-223 779.6 529 80.7
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.9e-223 779.2 528 80.3
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 4.3e-223 778.1 527 79.7
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 3.5e-217 758.4 525 79.4
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 2.5e-215 752.3 505 80.8
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 1.2e-214 750.0 528 78.2
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 1.3e-211 740.0 533 76.2
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 4.9e-211 738.0 579 72.7
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 3.0e-208 728.8 530 74.7
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 1.5e-207 726.5 485 80.0
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 5.6e-207 724.5 457 83.4
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 2.1e-206 722.6 450 85.1
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 6.2e-206 721.1 473 82.2
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 8.1e-206 720.7 464 82.8
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 1.4e-205 719.9 514 76.8
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 1.2e-204 716.8 513 76.2
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 5.8e-204 714.5 533 73.2
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 1.7e-203 713.0 533 73.0
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 1.7e-203 713.0 510 76.5
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 6.4e-203 711.1 547 72.6
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 1.1e-202 710.3 534 72.7
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 1.1e-202 710.3 437 84.9
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 1.9e-202 709.5 451 83.4
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 2.4e-202 709.1 473 80.5
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 3.2e-202 708.8 491 78.8
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 1.2e-201 706.8 513 75.0
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 2.1e-201 706.1 455 82.0
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 4.6e-201 704.9 521 75.0
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 7.9e-201 704.1 456 81.8
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 1.8e-200 703.0 532 73.7
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 6.7e-200 701.0 461 80.7
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 1.1e-199 700.3 439 83.8
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 1.5e-199 699.9 454 82.2
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 3.3e-199 698.7 457 81.6
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 4.3e-199 698.4 477 79.2
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 4.3e-199 698.4 494 76.9
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 5.6e-199 698.0 457 81.4
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 7.4e-199 697.6 519 74.0
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 1.3e-198 696.8 456 81.6
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 1.3e-198 696.8 457 81.2
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 1.6e-198 696.4 456 81.8
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 1.6e-198 696.4 513 74.7
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 2.1e-198 696.0 476 78.8
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 2.1e-198 696.0 476 78.8
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 2.1e-198 696.0 498 75.7
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 4.8e-198 694.9 457 80.5
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 1.1e-197 693.7 491 77.4
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 1.8e-197 693.0 505 75.8
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 1.8e-197 693.0 453 80.6
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 1.8e-197 693.0 453 80.6
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 4.0e-197 691.8 461 80.7
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 9.0e-197 690.6 457 80.1
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 2.0e-196 689.5 491 76.6
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 2.0e-196 689.5 454 80.0
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 3.4e-196 688.7 458 79.7
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 4.5e-196 688.3 457 80.7
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 4.5e-196 688.3 513 73.9
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 1.7e-195 686.4 435 82.5
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 6.4e-195 684.5 474 77.0
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 2.4e-194 682.6 429 83.7
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 4.2e-194 681.8 531 70.8
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 7.1e-194 681.0 452 79.6
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 7.1e-194 681.0 502 74.3
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 1.2e-193 680.2 432 82.6
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 1.2e-193 680.2 460 78.5
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 1.6e-193 679.9 513 71.7
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 2.1e-193 679.5 454 79.3
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 2.1e-193 679.5 522 72.4
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 1.0e-192 677.2 471 78.3
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 1.3e-192 676.8 431 82.6
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 5.1e-192 674.9 530 69.8
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 5.1e-192 674.9 531 71.0
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 4.3e-191 671.8 406 85.5
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 5.6e-191 671.4 538 70.3
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 1.3e-190 670.2 527 70.4
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 1.6e-190 669.8 458 77.1
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 2.8e-190 669.1 459 77.1
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 4.8e-190 668.3 443 79.9
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 4.8e-190 668.3 443 79.9
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 4.8e-190 668.3 454 78.4
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 2.4e-189 666.0 453 77.0
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 3.1e-189 665.6 443 78.1
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 6.9e-189 664.5 443 79.7
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 7.6e-188 661.0 492 72.2
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 7.1e-186 654.4 426 81.2
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 3.5e-185 652.1 463 74.1
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 1.3e-184 650.2 434 79.7
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 1.3e-184 650.2 439 79.5
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 2.3e-184 649.4 456 76.5
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 3.0e-184 649.0 405 83.5
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 6.7e-184 647.9 429 80.2
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 2.8e-182 642.5 455 75.8
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 2.8e-182 642.5 459 75.6
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 6.3e-182 641.3 446 77.1
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 2.4e-181 639.4 460 73.3
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 7.6e-180 634.4 497 68.8
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 5.0e-179 631.7 459 75.2
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 3.2e-178 629.0 430 74.4
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 7.9e-177 624.4 424 77.6
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 2.3e-176 622.9 438 75.3
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 2.4e-173 612.8 455 71.4
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 2.6e-172 609.4 458 70.5
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 2.2e-171 606.3 444 72.7
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 5.0e-171 605.1 507 69.6
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 8.5e-171 604.4 504 68.1
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 8.5e-171 604.4 440 72.7
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 5.9e-164 581.6 421 75.1
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 6.7e-160 568.2 457 67.2
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 4.7e-153 545.4 456 65.1
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 4.7e-153 545.4 456 65.1
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 2.1e-145 520.0 417 64.0
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 3.3e-138 496.1 455 59.1
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 1.0e-136 491.1 439 59.0
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 2.8e-134 483.0 376 71.5
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 2.5e-130 469.9 378 68.5
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 6.8e-128 461.8 377 67.6
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 6.4e-126 455.3 367 64.6
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 1.1e-109 401.4 230 91.7
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.8e-104 384.0 375 60.0
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 4.6e-100 369.4 436 48.4
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 1.9e-90 337.4 279 67.7
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 7.3e-90 335.5 454 46.5
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 8.7e-75 285.4 415 41.0
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 2.8e-73 280.4 169 89.3
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 1.8e-72 277.7 386 40.2
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 1.3e-70 271.6 156 94.2
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 2.5e-66 257.3 417 35.3
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 6.9e-64 249.2 254 54.3
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 3.9e-59 233.4 376 37.0
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 4.5e-55 219.9 452 36.1
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 8.5e-54 215.7 277 49.1
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 3.2e-53 213.8 162 67.9
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 1.7e-41 174.9 126 66.7
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 5.9e-39 166.4 139 70.5
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 1.5e-29 135.2 120 63.3
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 1.8e-27 128.3 100 66.0
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 1.5e-26 125.2 86 73.3
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 4.8e-25 120.2 98 70.4
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 1.0e-19 102.4 124 50.8
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 1.3e-17 95.5 390 24.6
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 8.6e-14 82.8 430 24.7
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 3.4e-10 70.9 349 24.4
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 8.3e-09 66.2 67 58.2


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