Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 5.4e-62 241.1 149 100.0
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 9.2e-46 187.2 144 86.8
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 3.0e-36 155.6 143 62.9
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 8.7e-28 127.5 143 55.9
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 7.3e-27 124.4 142 66.9
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.1e-26 122.9 142 66.9
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.1e-26 122.9 142 66.9
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 1.7e-23 113.2 142 64.8
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.7e-23 113.2 142 64.8
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.9e-23 112.5 142 64.1
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 6.4e-23 111.3 144 60.4
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 2.1e-21 106.3 140 62.1
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 4.6e-21 105.1 141 61.7
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 6.6e-20 101.3 146 47.3
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 6.6e-20 101.3 141 47.5
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.5e-19 100.1 143 50.3
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 4.3e-19 98.6 141 51.1
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 2.1e-18 96.3 141 58.9
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 6.2e-18 94.7 141 58.2
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 6.2e-18 94.7 146 46.6
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.8e-17 93.2 146 56.8
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.4e-17 92.8 146 57.5
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 3.4e-16 89.0 141 44.0
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 3.4e-16 89.0 148 49.3
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 7.6e-16 87.8 142 41.5
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.3e-15 87.0 149 41.6
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 2.9e-15 85.9 141 44.0
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 3.8e-15 85.5 142 43.0
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 3.8e-15 85.5 144 44.4
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 1.9e-14 83.2 144 45.8
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 2.4e-14 82.8 141 40.4
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 2.4e-14 82.8 157 45.2
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 4.2e-14 82.0 149 41.6
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 4.2e-14 82.0 143 42.7
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 5.4e-14 81.6 153 52.9
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 5.4e-14 81.6 146 53.4
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 7.1e-14 81.3 142 43.7
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 1.6e-13 80.1 144 45.1
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 3.5e-13 79.0 156 39.7
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 4.6e-13 78.6 142 40.1
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 6.0e-13 78.2 151 54.3
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 7.9e-13 77.8 141 43.3
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.3e-12 76.3 142 40.1
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.3e-12 76.3 142 40.1
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 2.3e-12 76.3 141 41.1
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 5.1e-12 75.1 141 39.0
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 5.1e-12 75.1 142 39.4
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 6.7e-12 74.7 142 40.8
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 1.5e-11 73.6 142 40.8
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 3.3e-11 72.4 152 42.8
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 5.6e-11 71.6 141 37.6
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 7.4e-11 71.2 141 41.8
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.3e-10 70.5 152 37.5
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 2.1e-10 69.7 64 56.2
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 4.8e-10 68.6 66 54.5
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 1.4e-09 67.0 155 45.2
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 1.8e-09 66.6 142 40.1
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 3.1e-09 65.9 141 40.4
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 3.1e-09 65.9 63 79.4
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 3.1e-09 65.9 108 41.7
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 5.3e-09 65.1 147 36.1
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 5.3e-09 65.1 147 36.1
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 9.0e-09 64.3 146 34.2
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 9.0e-09 64.3 147 35.4
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 1.2e-08 63.9 139 45.3
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 1.5e-08 63.5 147 34.7
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 2.0e-08 63.2 133 36.1
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 2.0e-08 63.2 147 34.7
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 2.6e-08 62.8 144 38.9
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 3.4e-08 62.4 146 34.2
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 3.4e-08 62.4 148 35.8
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 3.4e-08 62.4 146 34.2
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 3.4e-08 62.4 148 35.8
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 3.4e-08 62.4 147 34.0
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 5.8e-08 61.6 144 36.8
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 5.8e-08 61.6 147 34.7
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 7.6e-08 61.2 145 34.5
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 7.6e-08 61.2 145 34.5
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.3e-07 60.5 133 35.3
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 1.7e-07 60.1 146 34.9
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 2.2e-07 59.7 147 45.6
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 2.9e-07 59.3 145 33.1
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 2.9e-07 59.3 145 32.4
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 3.8e-07 58.9 145 33.1
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 3.8e-07 58.9 123 34.1
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 8.4e-07 57.8 145 33.8
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 8.4e-07 57.8 145 33.8
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.4e-06 57.0 135 33.3
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 2.4e-06 56.2 137 35.0
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 4.2e-06 55.5 148 35.1
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 5.5e-06 55.1 154 33.1
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 9.3e-06 54.3 169 30.8
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 9.3e-06 54.3 144 32.6


User provided reference genes

Program Settings