Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1015900 Malus domestica HOM05D007357 ORTHO05D009314 1.9e-91 339.3 199 100.0
Prupe.5G019800 Prunus persica HOM05D007357 ORTHO05D009314 1.8e-68 263.1 202 74.3
MD06G1016600 Malus domestica HOM05D007357 ORTHO05D009314 2.1e-61 239.6 190 78.9
RcHm_v2.0_Chr7g0213521 Rosa chinensis HOM05D007357 ORTHO05D009314 5.0e-47 191.8 135 78.5
FvH4_5g24040 Fragaria vesca HOM05D007357 ORTHO05D009314 6.5e-47 191.4 126 81.7
FAN18G2492 Fragaria x ananassa HOM05D007357 ORTHO05D009314 6.5e-47 191.4 126 81.7
FAN18G4511 Fragaria x ananassa HOM05D007357 ORTHO05D009314 6.5e-47 191.4 126 81.7
FAN08G0560 Fragaria x ananassa HOM05D007357 ORTHO05D009314 7.2e-46 188.0 126 80.2
FvH4_3g08760 Fragaria vesca HOM05D007357 ORTHO05D009314 2.1e-45 186.4 144 72.2
Haze_08047 Corylus avellana HOM05D007357 ORTHO05D009314 6.7e-44 181.4 193 55.4
CiPaw.11G103400 Carya illinoinensis HOM05D007357 ORTHO05D009314 1.1e-41 174.1 173 60.7
CsaV3_3G030320 Cucumis sativus L. HOM05D007357 ORTHO05D009314 7.7e-40 167.9 194 54.1
CSS0024010 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 1.3e-39 167.2 127 70.1
Sed0001819 Sechium edule HOM05D007357 ORTHO05D009314 1.1e-38 164.1 196 51.0
ClCG07G002370 Citrullus lanatus HOM05D007357 ORTHO05D009314 1.5e-38 163.7 194 52.6
QL02p024644 Quercus lobata HOM05D007357 ORTHO05D009314 4.2e-38 162.2 197 52.3
Actinidia14748 Actinidia chinensis HOM05D007357 ORTHO05D009314 7.2e-38 161.4 176 52.3
Rhsim07G0138300 Rhododendron simsii HOM05D007357 ORTHO05D009314 7.2e-38 161.4 123 67.5
Gohir.D12G206000 Gossypium hirsutum HOM05D007357 ORTHO05D009314 2.7e-37 159.5 172 57.0
Gohir.A12G203400 Gossypium hirsutum HOM05D007357 ORTHO05D009314 8.0e-37 157.9 172 56.4
Gorai.008G220900 Gossypium raimondii HOM05D007357 ORTHO05D009314 1.4e-36 157.1 172 55.8
Cc08_g05250 Coffea canephora HOM05D007357 ORTHO05D009314 3.0e-36 156.0 119 70.6
VMungo1215G1709 Vigna mungo HOM05D007357 ORTHO05D009314 5.7e-35 151.8 135 63.0
Cfa012604 Carpinus fangiana HOM05D007357 ORTHO05D009314 9.8e-35 151.0 222 45.9
Phvul.002G128100 Phaseolus vulgaris HOM05D007357 ORTHO05D009314 1.3e-34 150.6 201 48.8
arahy.Tifrunner.gnm1.ann1.0Q5JCD Arachis hypogaea HOM05D007357 ORTHO05D009314 2.2e-34 149.8 192 51.0
arahy.Tifrunner.gnm1.ann1.JPN6B0 Arachis hypogaea HOM05D007357 ORTHO05D009314 2.2e-34 149.8 192 51.0
Sed0016962 Sechium edule HOM05D007357 ORTHO05D009314 2.2e-34 149.8 189 50.3
MELO3C022754.2 Cucumis melo HOM05D007357 ORTHO05D009314 2.8e-34 149.4 194 50.0
COL.COLO4_16848 Corchorus olitorius HOM05D007357 ORTHO05D009314 6.3e-34 148.3 129 62.0
Potri.001G132232 Populus trichocarpa HOM05D007357 ORTHO05D009314 3.1e-33 146.0 124 62.9
TWI34G1422 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.7e-32 142.9 130 60.0
TWI34G1682 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 2.7e-32 142.9 130 60.0
Ah.07g201200 Amaranthus hybridus HOM05D007357 ORTHO05D009314 4.5e-32 142.1 119 63.0
Manes.17G008100 Manihot esculenta HOM05D007357 ORTHO05D009314 1.3e-31 140.6 167 52.1
TAR629G3058 Trochodendron aralioides HOM05D007357 ORTHO05D009314 2.2e-31 139.8 127 59.8
AUR62027337 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.9e-31 139.4 123 58.5
AUR62044266 Chenopodium quinoa HOM05D007357 ORTHO05D009314 2.9e-31 139.4 123 58.5
CANSAT21G2249 Cannabis sativa HOM05D007357 ORTHO05D009314 8.5e-31 137.9 186 51.1
Migut.A00548 Erythranthe guttata HOM05D007357 ORTHO05D009314 1.5e-30 137.1 120 63.3
HanXRQChr17g0539311 Helianthus annuus HOM05D007357 ORTHO05D009314 1.5e-30 137.1 133 55.6
Nn4g25471 Nelumbo nucifera HOM05D007357 ORTHO05D009314 1.9e-30 136.7 195 46.7
Sc07g0008390 Simmondsia chinensis HOM05D007357 ORTHO05D009314 4.2e-30 135.6 120 60.0
AUR62007392 Chenopodium quinoa HOM05D007357 ORTHO05D009314 7.2e-30 134.8 123 56.9
Ciclev10002529m.g Citrus clementina HOM05D007357 ORTHO05D009314 1.2e-29 134.0 124 60.5
Lj2g0006468 Lotus japonicus HOM05D007357 ORTHO05D009314 1.2e-29 134.0 178 50.0
Nitab4.5_0001033g0080 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.6e-29 133.7 119 59.7
Cpa.g.sc223.2 Carica papaya HOM05D007357 ORTHO05D009314 2.1e-29 133.3 168 45.8
Sopen08g024580 Solanum pennellii HOM05D007357 ORTHO05D009314 2.8e-29 132.9 119 59.7
CAN.G1269.3 Capsicum annuum HOM05D007357 ORTHO05D009314 3.6e-29 132.5 119 61.3
PGSC0003DMG400030879 Solanum tuberosum HOM05D007357 ORTHO05D009314 3.6e-29 132.5 119 58.8
Peaxi162Scf00408g00712 Petunia axillaris HOM05D007357 ORTHO05D009314 4.7e-29 132.1 198 43.9
Glyma.01G150100 Glycine max HOM05D007357 ORTHO05D009314 6.1e-29 131.7 175 49.1
Oeu059314.1 Olea europaea HOM05D007357 ORTHO05D009314 1.4e-28 130.6 150 50.7
ECA246G3443 Erigeron canadensis HOM05D007357 ORTHO05D009314 1.8e-28 130.2 127 52.8
Medtr5g026790 Medicago truncatula HOM05D007357 ORTHO05D009314 5.2e-28 128.6 195 44.6
Eucgr.D02601 Eucalyptus grandis HOM05D007357 ORTHO05D009314 8.8e-28 127.9 128 57.0
Lsat_1_v5_gn_3_28060 Lactuca sativa HOM05D007357 ORTHO05D009314 8.8e-28 127.9 119 57.1
PSO063G0202 Papaver somniferum HOM05D007357 ORTHO05D009314 2.6e-27 126.3 120 54.2
Lalb_Chr05g0215411 Lupinus albus HOM05D007357 ORTHO05D009314 4.4e-27 125.6 173 49.1
Psat2g142360 Pisum sativum HOM05D007357 ORTHO05D009314 9.8e-27 124.4 178 47.8
CSS0046502 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.7e-26 122.5 98 67.3
Duzib068G0657 Durio zibethinus HOM05D007357 ORTHO05D009314 3.7e-26 122.5 154 52.6
Aqoxy5G03983 Aquilegia oxysepala HOM05D007357 ORTHO05D009314 6.3e-26 121.7 126 50.0
HPP92_025510 Vanilla planifolia HOM05D007357 ORTHO05D009314 4.1e-25 119.0 122 51.6
DCAR_008186 Daucus carota HOM05D007357 ORTHO05D009314 1.6e-24 117.1 130 52.3
FAN11G2380 Fragaria x ananassa HOM05D007357 ORTHO05D009314 1.6e-24 117.1 79 79.7
HPP92_025525 Vanilla planifolia HOM05D007357 ORTHO05D009314 3.5e-24 115.9 122 50.0
ATR0829G081 Amborella trichopoda HOM05D007357 ORTHO05D009314 7.8e-24 114.8 122 48.4
EL10Ac5g11952 Beta vulgaris HOM05D000153 ORTHO05D000118 1.7e-23 113.6 81 71.6
Glyma.09G214200 Glycine max HOM05D007357 ORTHO05D009314 1.1e-22 110.9 138 51.4
Oeu042216.1 Olea europaea HOM05D007357 ORTHO05D009314 1.5e-22 110.5 216 37.5
Os07g0452600 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 4.3e-22 109.0 120 49.2
CDE12G0114 Ceratophyllum demersum HOM05D007357 ORTHO05D009314 5.6e-22 108.6 128 44.5
MD06G1016300 Malus domestica HOM05D007357 ORTHO05D009314 1.2e-21 107.5 59 98.3
unitig_32.g10966 Utricularia gibba HOM05D007357 ORTHO05D009314 1.2e-21 107.5 128 46.9
TPR.G17258 Trifolium pratense HOM05D007357 ORTHO05D009314 2.8e-21 106.3 188 39.4
vmacro13970 Vaccinium macrocarpon HOM05D007357 ORTHO05D009314 3.6e-21 105.9 145 46.2
Hma1.2p1_1179F.1_g264570 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.4e-20 104.0 122 51.6
Haze_08057 Corylus avellana HOM05D007357 ORTHO05D009314 1.8e-20 103.6 188 39.9
Hund11140 Selenicereus undatus HOM05D007357 ORTHO05D009314 2.3e-20 103.2 116 53.4
Zm00001eb096560 Zea mays HOM05D007357 ORTHO05D009314 5.2e-20 102.1 186 36.6
Solyc08g075930.4 Solanum lycopersicum HOM05D007357 ORTHO05D009314 2.0e-19 100.1 90 60.0
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 4.4e-19 99.0 100 58.0
ECA240G0146 Erigeron canadensis HOM05D007357 ORTHO05D009314 5.7e-19 98.6 121 44.6
TWI79G1144 Tripterygium wilfordii HOM05D007357 ORTHO05D009314 9.8e-19 97.8 100 58.0
Sabra01G0102000 Salix brachista HOM05D007357 ORTHO05D009314 4.9e-18 95.5 78 60.3
Thecc.03G316500 Theobroma cacao HOM05D007357 ORTHO05D009314 1.4e-17 94.0 82 63.4
PSO782G0982 Papaver somniferum HOM05D007357 ORTHO05D009314 1.8e-17 93.6 92 53.3
SGA_v2.0_scaffold89G27413 Striga asiatica HOM05D003343 ORTHO05D003787 9.2e-17 91.3 82 61.0
Nitab4.5_0001786g0050 Nicotiana tabacum HOM05D007357 ORTHO05D009314 1.2e-13 80.9 124 44.4
Ca_25098_v3 Cicer arietinum L. HOM05D007357 ORTHO05D009314 3.6e-13 79.3 151 41.7
CSS0020054 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 8.0e-13 78.2 58 69.0
CSS0037866 Camellia sinensis var. sinensis HOM05D007357 ORTHO05D009314 3.1e-12 76.3 58 67.2
Os08g0180400 Oryza sativa ssp. japonica HOM05D007357 ORTHO05D009314 2.6e-11 73.2 74 47.3
Zm00001eb171770 Zea mays HOM05D007357 ORTHO05D009314 1.7e-10 70.5 93 38.7
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 1.4e-09 67.4 50 70.0
AagrBONN_evm.TU.Sc2ySwM_228.1692 Anthoceros agrestis HOM05D007357 ORTHO05D009314 2.0e-08 63.5 103 35.9
Hma1.2p1_0784F.1_g217055 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.3e-07 60.8 83 43.4
Hma1.2p1_0944F.1_g240000 Hydrangea macrophylla HOM05D007357 ORTHO05D009314 1.3e-07 60.8 83 43.4
Oeu059300.1 Olea europaea HOM05D007357 ORTHO05D009314 1.1e-06 57.8 70 48.6


User provided reference genes

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