Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 4.3e-82 308.1 179 100.0
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 3.0e-59 232.3 176 79.0
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 7.9e-52 207.6 179 72.1
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 1.1e-50 203.8 177 71.8
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.1e-50 203.8 177 71.8
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 1.1e-50 203.8 177 71.8
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.5e-50 202.6 174 73.0
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 1.4e-43 180.3 167 66.5
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 5.1e-43 178.3 179 60.3
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 9.7e-42 174.1 177 60.5
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 8.2e-41 171.0 179 59.8
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 3.1e-40 169.1 175 58.9
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 1.2e-39 167.2 172 62.8
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 2.6e-39 166.0 179 58.1
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 7.7e-39 164.5 179 60.9
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 1.0e-38 164.1 176 60.2
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 7.2e-37 157.9 179 60.3
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 9.4e-37 157.5 177 55.9
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.6e-36 156.8 180 59.4
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 2.1e-36 156.4 178 60.7
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 4.7e-36 155.2 179 58.7
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 7.9e-36 154.5 179 56.4
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.0e-34 149.8 175 58.3
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 2.2e-33 146.4 177 54.8
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 2.2e-33 146.4 175 53.1
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 2.8e-33 146.0 175 52.0
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 6.3e-33 144.8 179 55.3
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 3.1e-32 142.5 179 51.4
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 7.0e-32 141.4 179 52.5
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 2.0e-31 139.8 165 60.0
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 2.6e-31 139.4 165 59.4
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 3.5e-31 139.0 170 54.1
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 4.5e-31 138.7 178 56.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 5.9e-31 138.3 179 47.5
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 2.9e-30 136.0 168 54.8
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 3.8e-30 135.6 179 50.3
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 5.0e-30 135.2 179 51.4
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 1.1e-29 134.0 176 59.1
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.1e-29 134.0 175 52.0
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 2.5e-29 132.9 137 64.2
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 3.2e-29 132.5 177 51.4
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 4.2e-29 132.1 175 51.4
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 2.7e-28 129.4 175 49.1
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 8.0e-28 127.9 175 50.3
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 8.0e-28 127.9 179 51.4
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 8.0e-28 127.9 136 67.6
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 8.0e-28 127.9 150 54.7
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.0e-27 127.5 176 50.0
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 3.0e-27 125.9 179 49.7
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.1e-26 124.0 175 49.7
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 2.6e-26 122.9 184 51.1
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 2.6e-26 122.9 170 50.6
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 3.3e-26 122.5 179 52.0
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 3.3e-26 122.5 165 53.9
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 9.7e-26 120.9 179 52.0
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.7e-25 120.2 179 51.4
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 2.2e-25 119.8 180 48.9
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 3.7e-25 119.0 170 47.1
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 3.7e-25 119.0 182 52.7
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 8.2e-25 117.9 151 54.3
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.1e-24 117.5 139 56.8
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.1e-24 115.5 181 46.4
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 4.1e-24 115.5 147 53.7
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 5.3e-24 115.2 179 48.6
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 5.3e-24 115.2 147 55.1
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 7.0e-24 114.8 173 49.7
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 9.1e-24 114.4 178 46.6
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.2e-23 114.0 147 54.4
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.2e-23 114.0 147 53.1
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.6e-23 113.6 179 48.0
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 2.0e-23 113.2 147 54.4
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.0e-23 113.2 168 48.2
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 2.6e-23 112.8 177 47.5
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 2.6e-23 112.8 147 53.7
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 2.6e-23 112.8 167 52.1
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.0e-22 110.9 167 50.9
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 1.0e-22 110.9 156 50.0
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 1.3e-22 110.5 175 46.9
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.3e-22 110.5 152 56.6
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 2.2e-22 109.8 136 57.4
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 3.8e-22 109.0 165 53.9
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 8.5e-22 107.8 152 55.3
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 1.5e-21 107.1 148 53.4
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.9e-21 106.7 97 71.1
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 1.9e-21 106.7 97 70.1
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 9.4e-21 104.4 110 67.3
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 1.6e-20 103.6 156 51.3
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 3.0e-19 99.4 175 46.3
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 6.8e-19 98.2 179 46.4
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.3e-17 94.0 180 45.0
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 1.3e-17 94.0 99 69.7
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 3.7e-17 92.4 183 43.7
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 4.8e-17 92.0 129 53.5
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 2.4e-16 89.7 96 71.9
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 4.1e-16 89.0 173 41.0
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 7.0e-16 88.2 116 56.0
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 9.1e-16 87.8 120 47.5
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.7e-15 86.3 151 48.3
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 3.5e-15 85.9 175 43.4
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 5.9e-15 85.1 80 81.2
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 1.0e-14 84.3 133 44.4
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 3.6e-12 75.9 164 41.5
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 8.8e-11 71.2 78 70.5


User provided reference genes

Program Settings