Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.6e-155 552.7 283 100.0
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 3.5e-110 402.1 280 75.7
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.7e-88 330.1 302 62.9
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 4.4e-73 278.9 284 60.6
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.2e-63 244.6 263 57.4
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 5.8e-57 225.3 263 55.5
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 9.9e-57 224.6 264 54.2
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.9e-57 224.6 264 54.2
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.9e-57 224.6 263 54.4
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 2.4e-55 219.9 268 52.2
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 1.6e-54 217.2 269 52.0
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.3e-53 214.2 262 52.7
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 6.6e-53 211.8 263 52.1
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 2.5e-52 209.9 263 51.7
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 3.4e-49 199.5 269 49.4
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 4.4e-49 199.1 268 50.4
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 9.9e-49 198.0 280 46.8
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 2.4e-47 193.4 273 48.7
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 1.2e-46 191.0 264 49.6
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 3.5e-46 189.5 287 48.4
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 8.7e-45 184.9 293 47.1
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.5e-44 184.1 256 46.1
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.9e-44 183.7 264 47.3
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.4e-42 177.6 266 43.6
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.8e-42 177.2 265 46.4
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.8e-42 177.2 264 46.2
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.4e-42 176.8 276 44.9
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 3.1e-42 176.4 270 47.0
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 4.0e-42 176.0 255 47.5
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 5.3e-42 175.6 260 48.5
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.2e-41 174.5 270 45.9
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.5e-41 174.1 287 43.9
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.0e-41 173.7 270 44.8
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.0e-41 173.7 268 45.9
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 5.8e-41 172.2 272 47.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 9.9e-41 171.4 273 43.6
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 3.8e-40 169.5 284 43.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 6.4e-40 168.7 290 44.1
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 8.4e-40 168.3 249 45.0
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.1e-39 167.9 248 46.0
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 2.4e-39 166.8 276 46.0
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 7.1e-39 165.2 289 43.6
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 4.6e-38 162.5 257 46.3
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 6.0e-38 162.2 290 40.7
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.3e-37 161.0 246 48.0
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 5.1e-37 159.1 287 41.5
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 6.7e-37 158.7 284 44.0
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 3.3e-36 156.4 262 42.0
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.6e-35 154.1 223 46.6
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 2.8e-35 153.3 254 44.5
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 2.8e-35 153.3 288 45.8
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.8e-35 153.3 243 43.2
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 6.9e-34 148.7 154 55.2
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 9.0e-34 148.3 246 44.7
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 9.0e-34 148.3 254 41.7
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 9.0e-34 148.3 287 42.5
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 9.9e-33 144.8 249 41.0
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 9.9e-33 144.8 192 50.5
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 9.9e-33 144.8 265 41.9
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 3.8e-32 142.9 248 41.5
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 3.2e-31 139.8 274 39.4
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 2.1e-30 137.1 254 40.6
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 3.5e-30 136.3 264 39.0
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 7.9e-30 135.2 268 38.8
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.3e-29 134.4 272 38.2
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 3.0e-29 133.3 272 39.3
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 3.9e-29 132.9 264 39.4
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 8.7e-29 131.7 271 39.9
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 8.7e-29 131.7 271 39.9
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.1e-28 131.3 282 37.6
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.9e-28 130.6 271 38.7
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.3e-28 129.8 271 39.9
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.3e-27 127.9 259 38.2
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.7e-27 126.3 278 37.4
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.8e-26 124.0 203 40.9
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.4e-26 123.6 265 37.7
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 2.4e-26 123.6 263 39.2
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 3.1e-26 123.2 259 38.2
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 6.9e-26 122.1 248 35.9
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.2e-25 121.3 259 38.2
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.2e-25 121.3 288 35.4
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.0e-25 120.6 342 31.6
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 2.0e-25 120.6 291 36.1
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 3.4e-25 119.8 254 40.2
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.8e-25 119.0 262 36.6
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 7.6e-25 118.6 253 39.1
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 1.3e-24 117.9 260 38.8
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 1.7e-24 117.5 157 48.4
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 8.4e-24 115.2 260 34.2
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 4.2e-23 112.8 269 35.7
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 4.2e-23 112.8 260 37.3
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.2e-22 111.3 265 34.7
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.2e-22 111.3 260 34.2
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 1.2e-22 111.3 354 31.6
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.6e-22 110.9 257 36.2
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 6.0e-22 109.0 262 37.0
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.3e-21 107.8 276 37.7
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 3.9e-21 106.3 131 47.3
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 6.7e-21 105.5 289 35.6
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.9e-20 104.0 255 38.8
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-20 103.2 168 40.5
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-20 103.2 228 34.6
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 5.7e-20 102.4 211 39.8
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.7e-20 102.4 286 35.0
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.6e-19 100.9 262 34.0
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.6e-19 100.9 230 37.4
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.4e-18 97.8 304 33.9
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 4.1e-18 96.3 263 34.2
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.2e-17 94.7 253 36.8
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.2e-17 94.7 253 36.8
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 2.6e-17 93.6 134 42.5
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.8e-16 89.7 244 34.4
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 2.3e-13 80.5 208 31.2
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 3.7e-11 73.2 84 48.8
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 2.4e-10 70.5 139 42.4
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 2.4e-10 70.5 135 40.0
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 4.1e-10 69.7 260 27.7
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.7e-09 65.5 194 32.0
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 7.9e-06 55.5 173 33.5


User provided reference genes

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