Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 4.5e-117 425.2 334 100.0
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 4.7e-58 229.2 334 63.8
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 1.5e-40 171.0 335 46.9
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 5.8e-24 115.9 326 33.7
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 1.2e-21 108.2 320 45.0
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 2.3e-20 104.0 322 47.5
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 1.1e-19 101.7 318 37.1
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.3e-19 100.1 322 41.9
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.3e-19 100.1 322 41.9
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 9.6e-19 98.6 357 39.2
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 4.8e-18 96.3 310 35.5
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.8e-18 96.3 325 37.8
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 4.8e-18 96.3 337 40.7
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 1.4e-17 94.7 319 40.8
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 2.4e-17 94.0 376 36.4
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 3.1e-17 93.6 291 40.5
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 3.1e-17 93.6 320 36.9
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 4.1e-17 93.2 324 44.8
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 5.3e-17 92.8 322 35.4
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 9.0e-17 92.0 296 37.8
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 4.5e-16 89.7 384 43.8
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 5.9e-16 89.4 389 40.9
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 7.6e-16 89.0 327 32.4
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 1.0e-15 88.6 216 35.6
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 2.2e-15 87.4 345 46.7
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.9e-14 84.3 145 38.6
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 2.5e-14 84.0 333 32.1
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 3.2e-14 83.6 127 44.1
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 5.5e-14 82.8 312 43.3
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.6e-13 81.3 370 31.1
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 2.1e-13 80.9 381 39.6
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 3.6e-13 80.1 332 31.0
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 1.0e-12 78.6 322 30.1
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 3.0e-12 77.0 333 42.9
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 3.9e-12 76.6 319 31.7
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 5.1e-12 76.3 362 39.2
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 6.7e-12 75.9 334 28.1
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 8.7e-12 75.5 169 36.7
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.1e-11 75.1 326 31.9
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.5e-11 74.7 281 34.5
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.9e-11 74.3 326 31.9
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 1.9e-11 74.3 319 39.5
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 4.3e-11 73.2 320 28.8
Aqoxy4G00632 Aquilegia oxysepala HOM05D018497 ORTHO05D021348 5.7e-11 72.8 341 41.1
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 5.7e-11 72.8 330 41.2
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 5.7e-11 72.8 309 36.2
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 7.4e-11 72.4 189 36.0
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.6e-10 71.2 324 28.1
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.2e-10 70.9 131 40.5
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 3.7e-10 70.1 350 29.1
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 3.7e-10 70.1 315 37.1
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 4.8e-10 69.7 304 46.7
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.8e-10 69.7 122 43.4
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 6.3e-10 69.3 168 35.7
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 8.2e-10 68.9 334 36.2
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 8.2e-10 68.9 172 32.6
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 1.1e-09 68.6 131 39.7
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.4e-09 68.2 350 36.0
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.4e-09 68.2 118 42.4
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 1.8e-09 67.8 284 31.7
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 1.8e-09 67.8 326 42.6
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.8e-09 67.8 343 35.3
Rhsim13G0180200 Rhododendron simsii HOM05D007160 ORTHO05D005331 1.8e-09 67.8 289 36.7
Potri.007G137001 Populus trichocarpa HOM05D008876 ORTHO05D010747 3.1e-09 67.0 84 42.9
COL.COLO4_35512 Corchorus olitorius HOM05D008876 ORTHO05D010747 4.1e-09 66.6 85 48.2
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.1e-09 66.6 125 41.6
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 6.9e-09 65.9 126 38.9
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 9.1e-09 65.5 363 38.6
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 1.5e-08 64.7 101 42.6
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.5e-08 64.7 352 35.8
Lalb_Chr09g0327841 Lupinus albus HOM05D007160 ORTHO05D005331 1.5e-08 64.7 394 34.0
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.0e-08 64.3 125 40.8
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 2.6e-08 63.9 327 26.6
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.5e-08 63.2 128 38.3
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 4.5e-08 63.2 334 26.6
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 2.2e-07 60.8 171 30.4
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 2.9e-07 60.5 351 36.5
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 6.5e-07 59.3 315 24.4
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 6.5e-07 59.3 125 34.4
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 8.5e-07 58.9 332 32.5
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 1.1e-06 58.5 281 28.8
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 1.1e-06 58.5 167 32.3
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 1.4e-06 58.2 367 28.6
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.9e-06 57.8 336 31.8
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 1.9e-06 57.8 118 37.3
TWI59G0664 Tripterygium wilfordii HOM05D008876 ORTHO05D010747 2.5e-06 57.4 86 45.3
Actinidia11002 Actinidia chinensis HOM05D008876 ORTHO05D010747 3.2e-06 57.0 84 41.7
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 4.2e-06 56.6 348 29.3
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 4.2e-06 56.6 348 29.3
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 5.5e-06 56.2 329 32.8
C05p27410 Brassica napus HOM05D009159 ORTHO05D005331 7.2e-06 55.8 143 33.6
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 7.2e-06 55.8 115 35.7
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 7.2e-06 55.8 281 35.2


User provided reference genes

Program Settings