Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 2.6e-270 934.9 501 100.0
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 4.3e-180 635.2 504 73.4
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 2.0e-132 476.9 502 58.6
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 4.4e-92 342.8 521 45.5
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.2e-91 340.5 548 44.7
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.9e-90 337.4 546 44.9
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 1.2e-89 334.7 528 45.6
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 4.4e-84 316.2 491 46.6
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 5.8e-84 315.8 548 43.4
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 4.1e-82 309.7 597 40.4
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 5.3e-45 186.4 532 34.8
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 3.7e-30 137.1 527 31.5
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 1.5e-28 131.7 494 26.7
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 4.5e-28 130.2 502 29.3
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 8.5e-27 125.9 528 30.3
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 1.6e-25 121.7 479 33.0
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 1.5e-23 115.2 526 29.7
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 1.4e-21 108.6 529 30.2
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 1.4e-21 108.6 456 28.9
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 3.1e-21 107.5 465 31.8
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 1.5e-20 105.1 430 29.3
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 2.0e-20 104.8 426 30.8
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 2.9e-19 100.9 302 34.8
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 1.1e-18 99.0 508 27.4
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 1.1e-18 99.0 481 26.4
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 5.5e-18 96.7 453 27.8
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 2.1e-17 94.7 509 27.7
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 7.9e-17 92.8 480 26.0
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 5.1e-16 90.1 424 29.5
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 2.0e-15 88.2 417 30.5
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 2.2e-14 84.7 432 27.5
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 3.7e-14 84.0 477 27.5
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 4.8e-14 83.6 519 27.0
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 6.3e-14 83.2 230 32.2
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 1.1e-13 82.4 519 27.0
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 3.5e-12 77.4 116 42.2
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 7.7e-12 76.3 176 38.1
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 7.7e-12 76.3 246 29.3
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 1.1e-10 72.4 464 27.8
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 3.2e-10 70.9 234 33.3
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 5.5e-10 70.1 53 67.9
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 7.2e-10 69.7 52 71.2
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 9.4e-10 69.3 52 71.2
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 2.1e-09 68.2 482 23.9
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 3.6e-09 67.4 55 56.4
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 3.6e-09 67.4 472 25.0
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 4.7e-09 67.0 519 26.0
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 6.1e-09 66.6 242 31.8
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 6.1e-09 66.6 505 24.6
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 1.4e-08 65.5 274 29.2
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 3.0e-08 64.3 497 26.8
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 4.0e-08 63.9 115 41.7
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 1.1e-07 62.4 240 32.5
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 1.1e-07 62.4 130 34.6
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 1.1e-07 62.4 52 59.6
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 2.0e-07 61.6 234 30.3
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 2.0e-07 61.6 482 23.0
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 9.7e-07 59.3 522 25.1
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 1.3e-06 58.9 52 59.6
FAN18G0578 Fragaria x ananassa HOM05D007489 ORTHO05D045794 1.7e-06 58.5 119 38.7
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 2.2e-06 58.2 52 57.7
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 6.3e-06 56.6 233 27.9


User provided reference genes

Program Settings