Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 1.7e-221 772.3 372 100.0
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 1.5e-193 679.5 375 88.0
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 2.4e-180 635.6 375 81.3
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 9.3e-180 633.6 375 81.6
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.6e-179 632.9 375 80.8
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 2.3e-178 629.0 376 80.9
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 5.6e-177 624.4 375 80.0
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.2e-166 590.1 375 77.3
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 3.8e-157 558.5 378 69.8
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 1.0e-154 550.4 371 68.2
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 1.0e-154 550.4 377 70.3
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 1.5e-153 546.6 371 67.7
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 2.5e-153 545.8 371 67.7
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 9.7e-153 543.9 369 70.5
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 2.2e-152 542.7 371 68.7
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 2.2e-152 542.7 378 67.7
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 3.7e-152 542.0 379 70.7
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 4.8e-152 541.6 371 69.0
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 1.1e-151 540.4 379 70.4
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 1.1e-151 540.4 376 68.6
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 1.7e-149 533.1 376 64.1
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 2.9e-149 532.3 372 66.9
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 2.9e-149 532.3 369 69.1
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 3.8e-149 531.9 373 67.0
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 1.1e-148 530.4 377 67.6
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 1.9e-148 529.6 373 68.4
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 1.4e-146 523.5 378 66.9
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 5.1e-146 521.5 376 66.2
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 6.7e-146 521.2 391 63.7
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 1.5e-145 520.0 375 67.2
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 4.4e-145 518.5 371 67.1
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 9.7e-145 517.3 377 64.2
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 2.2e-144 516.2 377 66.8
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 3.7e-144 515.4 376 66.5
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 6.3e-144 514.6 375 65.6
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 8.2e-144 514.2 374 66.6
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 9.1e-143 510.8 374 66.6
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 2.0e-142 509.6 369 67.8
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 5.9e-142 508.1 379 65.2
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 1.3e-141 506.9 380 65.0
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 7.2e-140 501.1 375 63.7
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 2.1e-139 499.6 375 64.0
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 3.9e-138 495.4 371 63.1
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 5.2e-138 495.0 374 62.8
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 1.1e-137 493.8 375 63.7
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 7.4e-137 491.1 375 62.1
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 7.4e-137 491.1 375 61.9
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 9.7e-137 490.7 375 62.1
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 2.8e-136 489.2 370 64.9
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 3.1e-135 485.7 375 64.8
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 3.1e-135 485.7 374 62.0
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 9.1e-135 484.2 376 64.1
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 4.5e-134 481.9 371 60.9
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 1.0e-133 480.7 366 63.1
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 1.7e-133 479.9 368 62.8
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 3.8e-133 478.8 376 61.4
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 5.0e-133 478.4 383 61.1
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 9.4e-132 474.2 369 62.1
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 3.6e-131 472.2 372 61.6
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 3.6e-131 472.2 376 60.6
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 3.0e-130 469.2 376 60.9
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 5.2e-130 468.4 376 61.4
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 6.7e-130 468.0 352 64.8
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 3.3e-129 465.7 376 59.3
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 7.5e-129 464.5 377 61.3
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 9.7e-129 464.2 359 62.4
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 9.7e-129 464.2 377 60.7
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 1.7e-128 463.4 366 60.1
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 5.3e-127 458.4 361 61.5
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 9.1e-127 457.6 369 60.2
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 1.2e-126 457.2 399 57.4
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 1.3e-125 453.8 377 59.4
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 3.0e-122 442.6 374 59.4
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 3.4e-121 439.1 370 57.0
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 1.4e-119 433.7 370 57.0
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 1.1e-116 424.1 378 58.2
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 2.3e-114 416.4 369 57.7
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 1.5e-113 413.7 367 56.7
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 4.4e-105 385.6 251 70.9
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 6.8e-98 361.7 377 48.5
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 1.0e-93 347.8 312 57.1
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 4.3e-92 342.4 390 46.9
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 2.6e-89 333.2 402 45.5
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 7.1e-87 325.1 352 51.1
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 2.2e-80 303.5 297 51.9
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 4.6e-78 295.8 379 42.2
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 8.6e-77 291.6 374 41.7
vmacro16044 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 1.7e-72 277.3 223 61.9
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 3.8e-72 276.2 374 39.0
Atru.chr10.1583 Acer truncatum HOM05D006665 ORTHO05D008327 1.6e-70 270.8 188 65.4
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 1.6e-67 260.8 324 42.0
Rhsim02G0145600 Rhododendron simsii HOM05D006665 ORTHO05D008327 1.5e-65 254.2 208 60.1
Lsat_1_v5_gn_7_25921 Lactuca sativa HOM05D006665 ORTHO05D008327 4.2e-63 246.1 204 57.4
VMungo0251G1318 Vigna mungo HOM05D006665 ORTHO05D008327 7.1e-63 245.4 220 56.4
Haze_06187 Corylus avellana HOM05D006665 ORTHO05D008327 9.3e-63 245.0 183 67.2
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 4.6e-62 242.7 406 36.5
Atru.chr10.1584 Acer truncatum HOM05D006665 ORTHO05D008327 1.5e-60 237.7 188 62.8
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 2.6e-57 226.9 252 48.0
Dinv12760 Davidia involucrata HOM05D006665 ORTHO05D008327 2.2e-56 223.8 253 49.4
Hma1.2p1_0113F.1_g055090 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 7.9e-54 215.3 209 56.9
Hma1.2p1_0113F.1_g055096 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 7.9e-54 215.3 209 56.9
Cpa.g.sc7.98 Carica papaya HOM05D006665 ORTHO05D008327 5.1e-53 212.6 144 66.7
AUR62039464 Chenopodium quinoa HOM05D006665 ORTHO05D008327 8.7e-53 211.8 179 60.3
Hund25815 Selenicereus undatus HOM05D006665 ORTHO05D008327 1.3e-48 198.0 183 55.2
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 5.3e-42 176.0 154 56.5
RcHm_v2.0_Chr5g0011471 Rosa chinensis HOM05D006665 ORTHO05D008327 8.5e-40 168.7 172 53.5
SGA_v2.0_scaffold1G00072 Striga asiatica HOM05D006665 ORTHO05D008327 1.4e-39 167.9 126 57.9
Psat2g000080 Pisum sativum HOM05D006665 ORTHO05D008327 5.5e-39 166.0 139 60.4
vmacro16043 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 7.2e-39 165.6 103 73.8
Psat7g069080 Pisum sativum HOM05D006665 ORTHO05D008327 9.3e-39 165.2 125 60.0
Oeu043117.1 Olea europaea HOM05D006665 ORTHO05D008327 2.7e-38 163.7 149 59.1
Haze_06186 Corylus avellana HOM05D006665 ORTHO05D008327 3.6e-38 163.3 148 55.4
Psat7g069040 Pisum sativum HOM05D006665 ORTHO05D008327 4.6e-38 162.9 264 40.2
FvH4_3g07410 Fragaria vesca HOM05D006665 ORTHO05D008327 5.3e-26 122.9 156 51.3
Cre16.g678400 Chlamydomonas reinhardtii HOM05D006665 ORTHO05D008327 5.9e-25 119.4 182 37.9
FAN25G1258 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.1e-23 115.2 80 75.0
MCO11G387 Micromonas commoda HOM05D006665 ORTHO05D008327 4.2e-23 113.2 480 22.9
arahy.Tifrunner.gnm1.ann1.XDX40G Arachis hypogaea HOM05D006665 ORTHO05D008327 8.8e-21 105.5 79 59.5
SEGI_34445 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 1.1e-20 105.1 102 44.1
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 6.3e-19 99.4 99 50.5
FAN11G1287 Fragaria x ananassa HOM05D006665 ORTHO05D008327 8.2e-19 99.0 184 42.4
Sabra04G0038600 Salix brachista HOM05D000074 ORTHO05D000220 7.7e-17 92.4 118 46.6
VMungo0251G0552 Vigna mungo HOM05D006665 ORTHO05D008327 2.7e-14 84.0 76 48.7
Psat6g090360 Pisum sativum HOM05D005323 ORTHO05D006820 4.7e-06 56.6 208 23.1


User provided reference genes

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