Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 9.6e-121 437.2 281 100.0
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 1.7e-72 276.9 290 69.7
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 2.0e-54 216.9 246 61.0
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.5e-28 131.0 167 51.5
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 3.6e-27 126.3 168 50.0
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 6.2e-27 125.6 168 50.0
FAN21G2246 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.8e-26 124.0 132 54.5
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 6.4e-24 115.5 271 39.1
RcHm_v2.0_Chr5g0012861 Rosa chinensis HOM05D014736 ORTHO05D009761 3.9e-21 106.3 157 48.4
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 6.6e-21 105.5 250 44.0
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 2.6e-17 93.6 116 44.0
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 2.4e-15 87.0 181 37.0
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 1.0e-13 81.6 288 35.4
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 1.0e-13 81.6 265 31.7
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 1.3e-13 81.3 156 38.5
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 3.0e-13 80.1 170 39.4
FAN16G2400 Fragaria x ananassa HOM05D014736 ORTHO05D009761 3.0e-13 80.1 144 43.8
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 5.1e-13 79.3 236 31.4
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 8.7e-13 78.6 275 34.5
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 1.1e-12 78.2 228 32.5
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 1.5e-12 77.8 298 30.9
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 2.1e-11 73.9 95 42.1
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 1.8e-10 70.9 147 36.1
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 2.4e-10 70.5 237 37.1
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 4.0e-10 69.7 156 33.3
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 6.9e-10 68.9 229 29.7
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 2.0e-09 67.4 248 33.5
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 2.6e-09 67.0 161 34.8
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 2.6e-09 67.0 253 29.6
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 4.5e-09 66.2 173 35.3
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 4.5e-09 66.2 173 35.3
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 5.8e-09 65.9 288 29.9
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 7.6e-09 65.5 263 27.4
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 1.3e-08 64.7 155 36.1
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 1.7e-08 64.3 252 27.4
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 3.8e-08 63.2 178 30.9
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 6.4e-08 62.4 176 32.4
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 6.4e-08 62.4 222 29.7
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 8.4e-08 62.0 156 34.6
BcaB02g09560 Brassica carinata HOM05D008719 ORTHO05D010898 1.1e-07 61.6 176 33.0
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 1.1e-07 61.6 302 28.8
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.1e-07 61.6 195 30.3
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 1.4e-07 61.2 145 33.1
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 1.9e-07 60.8 44 56.8
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 2.4e-07 60.5 170 30.6
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 2.4e-07 60.5 196 29.6
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 3.2e-07 60.1 177 32.8
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 4.2e-07 59.7 158 30.4
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 4.2e-07 59.7 177 32.2
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 4.2e-07 59.7 195 29.7
Gohir.A05G151600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 5.5e-07 59.3 131 32.1
Medtr2g049330 Medicago truncatula HOM05D009013 ORTHO05D009761 5.5e-07 59.3 139 36.7
ClCG03G007220 Citrullus lanatus HOM05D025335 ORTHO05D025087 9.3e-07 58.5 179 34.1
Gohir.D10G032500 Gossypium hirsutum HOM05D009852 ORTHO05D009761 1.2e-06 58.2 70 42.9
Gorai.011G034400 Gossypium raimondii HOM05D009852 ORTHO05D009761 1.2e-06 58.2 70 42.9
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 2.1e-06 57.4 175 28.6
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 2.7e-06 57.0 267 30.3
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 4.6e-06 56.2 217 26.7
THA.LOC104812838 Tarenaya hassleriana HOM05D010784 ORTHO05D012957 4.6e-06 56.2 144 31.2


User provided reference genes

Program Settings