Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 6.3e-132 474.2 249 100.0
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 4.0e-102 375.2 252 81.3
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 2.1e-87 326.2 254 72.0
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 8.7e-65 251.1 242 59.9
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 1.6e-63 246.9 242 59.9
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 3.1e-62 242.7 242 59.1
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 2.6e-61 239.6 226 61.9
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.9e-59 233.4 228 59.2
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 1.4e-54 217.2 235 51.9
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 4.5e-53 212.2 244 51.2
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 7.1e-51 204.9 229 52.4
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 9.3e-51 204.5 234 48.7
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.6e-50 203.8 243 49.8
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 4.6e-50 202.2 168 67.9
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 3.0e-49 199.5 235 50.2
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.9e-48 196.8 242 50.0
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 8.2e-47 191.4 249 45.8
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 1.1e-46 191.0 243 47.7
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 1.8e-46 190.3 198 53.0
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 1.2e-45 187.6 248 47.6
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 2.0e-45 186.8 243 46.5
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 5.8e-45 185.3 233 50.6
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 2.5e-43 179.9 203 51.2
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 1.5e-40 170.6 228 45.6
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 9.7e-40 167.9 241 41.9
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 1.6e-39 167.2 215 47.4
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 1.5e-37 160.6 248 44.4
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 2.0e-37 160.2 200 46.5
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 2.6e-37 159.8 287 36.2
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 4.5e-37 159.1 275 39.3
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 2.2e-36 156.8 262 40.1
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 2.2e-36 156.8 232 39.2
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 2.9e-36 156.4 285 38.2
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 6.5e-36 155.2 285 39.6
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 1.1e-35 154.5 285 40.0
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 3.2e-35 152.9 254 40.9
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 5.5e-35 152.1 202 44.1
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 7.2e-35 151.8 274 37.6
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 4.6e-34 149.1 273 39.2
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 7.9e-34 148.3 202 44.1
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 1.4e-33 147.5 273 39.2
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 6.7e-33 145.2 246 39.0
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 4.3e-32 142.5 246 37.8
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 5.7e-32 142.1 200 43.5
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 1.7e-31 140.6 188 44.1
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.8e-31 139.8 246 37.4
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 4.8e-31 139.0 245 36.7
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 1.1e-30 137.9 235 41.3
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 4.1e-30 136.0 180 42.8
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 4.1e-30 136.0 205 44.4
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 4.1e-30 136.0 233 39.9
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 5.3e-30 135.6 275 36.0
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 5.3e-30 135.6 275 36.0
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 5.3e-30 135.6 202 41.1
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 1.2e-29 134.4 205 44.4
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 1.5e-29 134.0 241 38.2
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 1.5e-29 134.0 249 38.2
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 1.7e-28 130.6 131 52.7
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 3.8e-28 129.4 132 54.5
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 5.0e-28 129.0 156 46.2
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 6.5e-28 128.6 256 37.9
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 8.5e-28 128.3 126 55.6
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 5.5e-27 125.6 288 36.1
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 1.6e-26 124.0 197 40.6
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 1.1e-24 117.9 146 45.9
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 3.3e-24 116.3 135 48.1
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.8e-23 113.2 259 34.0
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 5.3e-22 109.0 242 36.4
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 9.1e-22 108.2 130 50.0
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.9e-19 100.5 140 41.4
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 1.6e-18 97.4 342 29.2
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 4.7e-18 95.9 156 44.9
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 3.0e-17 93.2 220 35.9
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.6e-16 90.1 190 36.8
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 4.4e-16 89.4 136 43.4
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 5.7e-16 89.0 219 31.5
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 1.4e-14 84.3 122 41.0
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 7.0e-14 82.0 107 41.1
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 5.9e-13 79.0 118 40.7
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 2.2e-12 77.0 146 37.7
CANSAT35G1906 Cannabis sativa HOM05D007839 ORTHO05D009924 1.2e-10 71.2 245 27.8
Prupe.4G080600 Prunus persica HOM05D008587 ORTHO05D010485 4.4e-08 62.8 185 31.9
TWI73G0910 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 9.7e-08 61.6 146 30.8
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 1.3e-07 61.2 149 35.6
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 2.2e-07 60.5 142 34.5
THA.LOC104814298 Tarenaya hassleriana HOM05D008587 ORTHO05D010485 2.2e-07 60.5 106 39.6
Atru.chr10.1227 Acer truncatum HOM05D008587 ORTHO05D010485 2.8e-07 60.1 145 35.9
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.8e-07 60.1 140 34.3
CARHR128630 Cardamine hirsuta HOM05D008587 ORTHO05D010485 2.8e-07 60.1 141 33.3
QL05p058141 Quercus lobata HOM05D008587 ORTHO05D010485 3.7e-07 59.7 146 34.9
Sabra04G0043200 Salix brachista HOM05D008587 ORTHO05D010485 4.8e-07 59.3 167 30.5
Thhalv10017034m.g Eutrema salsugineum HOM05D008587 ORTHO05D010485 6.3e-07 58.9 141 32.6
AL4G30510 Arabidopsis lyrata HOM05D008587 ORTHO05D010485 1.1e-06 58.2 143 32.9
AT2G34540 Arabidopsis thaliana HOM05D008587 ORTHO05D010485 1.1e-06 58.2 143 32.9
Potri.004G064900 Populus trichocarpa HOM05D008587 ORTHO05D010485 1.4e-06 57.8 170 31.8
QL05p058191 Quercus lobata HOM05D008587 ORTHO05D010485 2.4e-06 57.0 98 41.8
Carub.0004s1621 Capsella rubella HOM05D008587 ORTHO05D010485 4.1e-06 56.2 106 35.8
Sp4g16800 Schrenkiella parvula HOM05D008587 ORTHO05D010485 4.1e-06 56.2 141 33.3
QL05p058149 Quercus lobata HOM05D008587 ORTHO05D010485 5.3e-06 55.8 152 32.2
QL05p058118 Quercus lobata HOM05D008587 ORTHO05D010485 7.0e-06 55.5 160 35.0


User provided reference genes

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