Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 2.6e-94 349.0 214 100.0
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 4.4e-73 278.5 210 84.8
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.5e-62 242.3 227 63.0
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 7.7e-62 241.1 202 65.8
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 3.7e-56 222.2 208 71.2
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 5.9e-54 214.9 201 62.2
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 3.7e-48 195.7 207 55.6
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 5.9e-46 188.3 198 62.6
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.3e-45 187.2 208 62.5
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 2.3e-45 186.4 200 54.0
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 1.1e-44 184.1 208 57.2
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.5e-44 183.0 201 51.7
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 5.6e-44 181.8 213 51.2
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 2.8e-43 179.5 199 51.3
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 3.6e-43 179.1 205 52.7
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 8.0e-43 177.9 208 50.0
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 1.8e-42 176.8 207 50.2
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 6.8e-42 174.9 200 64.0
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 3.4e-41 172.6 207 45.9
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 5.7e-41 171.8 199 48.7
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 3.7e-40 169.1 197 51.3
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 3.7e-40 169.1 208 49.0
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.4e-39 167.2 202 48.5
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 2.4e-39 166.4 208 49.0
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 5.4e-39 165.2 208 46.6
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 9.2e-39 164.5 202 48.5
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.0e-37 161.0 202 58.9
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.0e-37 161.0 202 58.9
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 1.1e-36 157.5 229 43.7
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 3.3e-36 156.0 219 56.2
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 4.3e-36 155.6 213 56.8
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 7.3e-36 154.8 213 43.7
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 9.5e-36 154.5 197 46.7
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.2e-35 154.1 194 45.9
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 1.2e-35 154.1 197 46.2
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 6.2e-35 151.8 230 41.3
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 1.0e-34 151.0 209 52.2
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 3.1e-34 149.4 197 49.2
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 3.1e-34 149.4 213 42.7
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 6.8e-34 148.3 208 44.2
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.2e-33 147.5 189 59.3
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 9.8e-33 144.4 218 43.6
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.3e-32 144.1 207 48.3
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 3.7e-32 142.5 199 44.7
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 8.3e-32 141.4 209 56.9
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 6.6e-29 131.7 208 41.3
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 8.6e-29 131.3 205 40.5
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 3.3e-28 129.4 194 43.8
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 4.3e-28 129.0 200 42.0
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.6e-27 127.1 189 55.0
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 4.7e-27 125.6 160 47.5
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 2.3e-26 123.2 143 68.5
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 2.3e-26 123.2 207 39.6
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 2.6e-25 119.8 148 47.3
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.6e-25 119.8 199 53.3
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 2.6e-25 119.8 153 48.4
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 4.4e-25 119.0 199 52.8
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 7.5e-25 118.2 144 46.5
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 9.8e-25 117.9 148 45.9
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 9.8e-25 117.9 144 48.6
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 2.2e-24 116.7 160 43.1
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 2.2e-24 116.7 164 39.6
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 2.9e-24 116.3 148 47.3
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 4.9e-24 115.5 160 44.4
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 4.9e-24 115.5 199 51.3
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 1.1e-23 114.4 206 40.3
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 2.4e-23 113.2 148 45.3
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 3.2e-23 112.8 203 37.4
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 1.6e-22 110.5 100 59.0
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.3e-20 102.4 151 42.4
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 9.5e-20 101.3 103 50.5
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 1.2e-19 100.9 145 44.8
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 8.1e-19 98.2 146 52.7
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 1.1e-18 97.8 188 36.2
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 3.1e-18 96.3 144 59.0
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 1.7e-16 90.5 97 49.5
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.9e-16 89.7 141 54.6
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 2.9e-16 89.7 141 55.3
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.2e-15 86.3 144 39.6
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 4.1e-15 85.9 74 64.9
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 4.1e-15 85.9 130 60.0
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 1.6e-14 84.0 199 35.2
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 4.6e-14 82.4 123 40.7
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.8e-14 81.6 172 36.0
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 3.9e-13 79.3 134 36.6
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 2.1e-11 73.6 107 43.0
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 8.1e-11 71.6 74 55.4
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 2.4e-10 70.1 107 37.4
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 9.9e-09 64.7 119 37.0
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 2.1e-06 57.0 129 30.2
Gorai.010G163100 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.5e-06 56.2 203 29.1


User provided reference genes

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