Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1282800 Malus domestica HOM05D005467 ORTHO05D006523 3.8e-42 174.5 91 100.0
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 1.6e-24 115.9 178 44.9
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 3.7e-21 104.8 77 67.5
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 4.6e-16 87.8 136 41.2
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 4.6e-16 87.8 75 56.0
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 1.0e-15 86.7 178 36.5
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 8.8e-15 83.6 179 36.9
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 8.8e-15 83.6 179 36.9
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.5e-14 82.8 179 36.9
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 9.7e-14 80.1 179 36.3
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 9.1e-12 73.6 176 32.4
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 2.6e-11 72.0 176 31.2
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 2.6e-11 72.0 135 36.3
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 2.6e-11 72.0 171 32.2
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 3.4e-11 71.6 172 32.0
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 5.9e-11 70.9 177 31.6
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 7.7e-11 70.5 172 31.4
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 7.7e-11 70.5 171 32.2
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 7.7e-11 70.5 177 31.1
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 1.0e-10 70.1 176 31.8
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 1.0e-10 70.1 145 33.1
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 1.3e-10 69.7 172 32.0
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 1.7e-10 69.3 170 32.4
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.2e-10 68.9 174 31.0
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 2.9e-10 68.6 172 31.4
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 3.8e-10 68.2 170 31.2
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 3.8e-10 68.2 172 31.4
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 3.8e-10 68.2 171 30.4
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 5.0e-10 67.8 172 30.8
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 5.0e-10 67.8 170 31.2
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 6.5e-10 67.4 173 28.9
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 6.5e-10 67.4 176 29.5
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 8.5e-10 67.0 176 30.1
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 1.1e-09 66.6 176 30.7
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 1.1e-09 66.6 172 32.0
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 1.4e-09 66.2 178 31.5
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 1.4e-09 66.2 170 30.6
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 1.9e-09 65.9 174 29.9
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 2.5e-09 65.5 172 30.2
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 3.2e-09 65.1 71 56.3
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 3.2e-09 65.1 168 31.0
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 4.2e-09 64.7 174 29.9
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 4.2e-09 64.7 177 31.1
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 4.2e-09 64.7 170 30.6
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 7.2e-09 63.9 171 30.4
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 7.2e-09 63.9 171 29.8
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 1.2e-08 63.2 172 28.5
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 1.2e-08 63.2 50 58.0
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 1.2e-08 63.2 159 30.2
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 1.6e-08 62.8 55 58.2
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 1.6e-08 62.8 173 27.2
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 1.6e-08 62.8 172 30.2
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 2.1e-08 62.4 169 31.4
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 2.7e-08 62.0 176 30.7
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 2.7e-08 62.0 179 29.1
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 3.6e-08 61.6 129 34.9
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 7.9e-08 60.5 174 28.7
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.0e-07 60.1 180 28.3
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 1.4e-07 59.7 45 66.7
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 1.4e-07 59.7 174 29.3
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 1.4e-07 59.7 173 26.6
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 1.4e-07 59.7 48 60.4
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.8e-07 59.3 180 28.3
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 1.8e-07 59.3 178 29.8
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 1.8e-07 59.3 29 96.6
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 3.0e-07 58.5 178 29.2
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 3.9e-07 58.2 48 58.3
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 5.1e-07 57.8 52 53.8
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 6.7e-07 57.4 175 28.6
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 8.8e-07 57.0 170 27.1
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 1.1e-06 56.6 57 56.1
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 1.1e-06 56.6 49 57.1
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 2.0e-06 55.8 171 26.3
CDE07G1559 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 2.6e-06 55.5 50 52.0
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 3.3e-06 55.1 171 28.1
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 4.4e-06 54.7 54 51.9
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 7.4e-06 53.9 29 82.8
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 9.7e-06 53.5 30 80.0


User provided reference genes

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