Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 0.0e+00 1100.1 558 100.0
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 1.4e-275 952.6 558 86.9
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 2.0e-247 859.0 563 79.9
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 2.7e-199 699.1 571 65.5
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 4.6e-199 698.4 590 64.2
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 1.1e-197 693.7 590 64.2
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 2.8e-196 689.1 573 64.6
FAN16G2143 Fragaria x ananassa HOM05D007837 ORTHO05D009965 4.2e-192 675.2 596 62.9
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 1.6e-180 636.7 582 59.5
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 8.2e-180 634.4 564 61.0
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 1.4e-179 633.6 559 60.8
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 1.2e-178 630.6 578 59.5
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 1.3e-177 627.1 560 60.5
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 1.9e-176 623.2 558 59.5
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 3.2e-176 622.5 537 62.9
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 2.7e-175 619.4 568 58.5
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 3.1e-171 605.9 577 58.2
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 6.9e-171 604.7 555 57.5
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 1.2e-170 604.0 555 57.5
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 7.7e-170 601.3 538 59.1
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 1.1e-168 597.4 555 56.4
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 1.2e-167 594.0 584 57.0
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 4.6e-167 592.0 571 55.0
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 2.3e-166 589.7 423 70.9
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 2.5e-165 586.3 561 56.3
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 9.7e-165 584.3 555 58.0
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 1.1e-157 560.8 563 53.8
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 9.1e-155 551.2 600 52.2
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 5.0e-153 545.4 552 53.3
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 1.5e-152 543.9 561 52.8
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 1.9e-152 543.5 553 54.2
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 2.0e-149 533.5 553 54.4
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 2.6e-149 533.1 549 54.1
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 1.3e-148 530.8 517 55.7
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 1.7e-148 530.4 541 52.1
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 5.9e-146 521.9 457 58.9
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 6.5e-145 518.5 635 46.8
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 1.5e-144 517.3 558 50.4
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 1.5e-144 517.3 558 50.4
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 6.8e-142 508.4 577 51.1
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 2.0e-141 506.9 534 53.6
Nitab4.5_0011721g0030 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.2e-140 503.4 663 44.2
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 2.0e-133 480.3 726 40.5
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 3.4e-133 479.6 629 45.0
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 3.1e-131 473.0 712 40.2
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 1.6e-130 470.7 479 53.7
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 4.0e-126 456.1 556 49.1
MBI18_g28215_MAGBIO Magnolia biondii HOM05D007837 ORTHO05D009965 3.5e-122 443.0 475 51.6
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 1.5e-120 437.6 434 53.5
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 4.3e-120 436.0 438 54.1
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 8.9e-118 428.3 438 53.9
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 2.9e-116 423.3 427 53.4
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 3.1e-110 403.3 431 50.6
arahy.Tifrunner.gnm1.ann1.SA9RL2 Arachis hypogaea HOM05D007837 ORTHO05D009965 3.2e-107 393.3 420 51.9
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 6.2e-103 379.0 350 56.6
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 2.4e-99 367.1 304 60.9
Potri.001G443025 Populus trichocarpa HOM05D007837 ORTHO05D009965 2.6e-93 347.1 272 64.0
Medtr4g035250 Medicago truncatula HOM05D007837 ORTHO05D009965 1.5e-88 331.3 420 47.9
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 1.3e-87 328.2 411 45.5
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 1.3e-84 318.2 408 47.1
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 6.2e-79 299.3 223 68.6
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 4.5e-69 266.5 415 37.6
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 8.4e-60 235.7 409 36.4
TPR.G1949 Trifolium pratense HOM05D007837 ORTHO05D009965 2.1e-58 231.1 185 61.6
Haze_05985 Corylus avellana HOM05D007837 ORTHO05D009965 5.5e-43 179.9 121 71.9
TAR633G0058 Trochodendron aralioides HOM05D007837 ORTHO05D009965 1.0e-41 175.6 196 48.0
TPR.G10794 Trifolium pratense HOM05D007837 ORTHO05D009965 1.1e-38 165.6 132 61.4
Hma1.2p1_0410F.1_g147010 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 5.9e-37 159.8 104 73.1
Medtr4g035220 Medicago truncatula HOM05D007837 ORTHO05D009965 9.7e-32 142.5 121 58.7
GSVIVG01037970001 Vitis vinifera HOM05D007837 ORTHO05D009965 1.0e-28 132.5 100 66.0
Sabra11G0145700 Salix brachista HOM05D007837 ORTHO05D009965 6.5e-28 129.8 117 53.8
Glyma.03G069100 Glycine max HOM05D007837 ORTHO05D009965 2.3e-25 121.3 170 41.8
Oeu008971.1 Olea europaea HOM05D007837 ORTHO05D009965 8.8e-25 119.4 106 59.4
PRCOL_00005542 Prasinoderma coloniale HOM05D007837 ORTHO05D009965 2.7e-18 97.8 322 26.4
MCO10G143 Micromonas commoda HOM05D007837 ORTHO05D009965 1.4e-17 95.5 425 24.9
TAR365G1222 Trochodendron aralioides HOM05D001154 ORTHO05D010892 5.2e-17 93.6 63 68.3
TAR626G1098 Trochodendron aralioides HOM05D001154 ORTHO05D010892 8.8e-17 92.8 63 68.3
Hma1.2p1_0410F.1_g147000 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 2.8e-15 87.8 195 33.3
SMO263G0007 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 1.4e-14 85.5 239 27.2
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 7.0e-14 83.2 248 29.4
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 7.0e-14 83.2 248 29.4
TAR086G0001 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.7e-13 81.3 64 62.5
Sabra11G0145800 Salix brachista HOM05D007837 ORTHO05D009965 4.5e-13 80.5 157 39.5
Cpa.g.sc192.14 Carica papaya HOM05D007837 ORTHO05D009965 1.0e-12 79.3 58 65.5
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.0e-12 79.3 244 28.7
TAR362G0005 Trochodendron aralioides HOM05D007837 ORTHO05D009965 8.6e-12 76.3 70 52.9
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 2.3e-09 68.2 231 27.3
TAR371G0483 Trochodendron aralioides HOM05D001154 ORTHO05D010892 5.2e-09 67.0 40 72.5
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 1.2e-08 65.9 268 26.1
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 2.0e-08 65.1 254 26.0
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 4.4e-08 63.9 242 25.2
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 5.7e-08 63.5 341 24.3
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 7.5e-08 63.2 251 25.1
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 1.3e-07 62.4 254 26.4
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.7e-07 60.8 305 24.6
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 3.7e-07 60.8 259 25.9
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 4.9e-07 60.5 256 25.8
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 1.1e-06 59.3 229 26.6
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 1.4e-06 58.9 269 23.4
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 1.4e-06 58.9 251 24.3
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 1.4e-06 58.9 251 24.7
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 1.8e-06 58.5 389 23.7
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 2.4e-06 58.2 301 24.6
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 2.4e-06 58.2 280 25.4
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 3.2e-06 57.8 230 27.0
SEGI_26529 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 3.2e-06 57.8 78 42.3
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 4.1e-06 57.4 258 26.0
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 4.1e-06 57.4 270 24.1
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 4.1e-06 57.4 217 24.9
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 7.0e-06 56.6 312 25.6
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 9.2e-06 56.2 303 25.1


User provided reference genes

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